| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357105
Identifier: 119357105
GI number: 119357105
Start: 1466333
End: 1467484
Strand: Reverse
Name: 119357105
Synonym: Cpha266_1292
Alternate gene names: NA
Gene position: 1467484-1466333 (Counterclockwise)
Preceding gene: 119357110
Following gene: 119357104
Centisome position: 46.83
GC content: 45.57
Gene sequence:
>1152_bases ATGAGCAGCACGTTGAACAACATTGAATTCCTTAGCCCCCGGCTCGTTGGTGAACGATTTTCGGGACATGCCATTCCGCT TGAAGTTCTTCGGGATTTGGCTGTACTGGAAGAAATGCTCGTTGAAACCGCAAAATGGGGGTACATGCAAGAACACCCCG ACAGGAAACGCATTCCTCGTGGTTTTACCAACGGTGTCTCTCTGAAGCTGACAGGTATTGAAGAGGGAAGTGCCATCCCG AAAATAGCCTTATTCTTCACTCTTGCGGGATCAAGTCTGAATCTTTTCCCTTCTGATAATGCCCATTACTTTCACCGGGC TAAAAATTCGATAGTTAATGCGGTTAATGCCGCCGAACAAAATCGGGATGTCAAGGAGTATTTGCCTGAAAATCTTCTTT GTTATTTTGACCGAATAGGCAGAAGTCTCAGAGATGGCGAGTCTCTTGAGTTGAATCCTGCTGACAGAGCACAACCGGCT CGACTGAACAAAACTACTCGCAGAAAATTATTGCTTGCCTCCTCCAACGTGATGGAGCTTACTGAGGAGATTACCTTGAG AGGGTCAATACCGGCAGCTGATCAGGCGAAAATGACGTTTGATTTGCACATTATCAGTGGACCTACAGTGAGTGGACCTA TTTCACCACAACATTGTGATATCGTCAAAGATGCCTTCATGCGTTATGGTCATGGCGGTATCGTGATGCTGCAGGGGATA GGAAGGTTTAATCGCAATAATCGGCTTCAAAGTATCGATTCTGTCGAGCACATCAGCTTGCTGGATTCTAACGACGTGCT GGTTCAGTTGGATGAACTTCGTTCTCTGGAGAATGGCTGGCTTGACGGTGAAGGTGTTGCGCCGGGTAAAGAGGGGCTGG ACTGGCTTGTCGGCTATTTTGAAACATATTACTCGGATGAATTGCCTGTACCATGCATTTATCCAACACCAGAAGGTGGC GTTCAAATTGAATGGGGCTTGAATGGTTATGAAATAACTCTTGCTGTAAATATCGATACCCATCAGGGTGACTTTCATGC CTTGAACATGAGTAATGATGACGAAATCATAAAGTCTCTTGATTTTAACAAGCTCGATGATTGTGTGTTGCTGAATCAGG AACTCAAGACACTATCGGAGGATGAGGTATGA
Upstream 100 bases:
>100_bases CCTTTGACCATGGTTCGAATGGAGAGACGCGGATATGCGCCTTTATGGCTTTATTTTATTCATGTTGTTTATATTGACCT CTAACCAACAATAGAGCGAA
Downstream 100 bases:
>100_bases ATGACGCTACACTGATGCTTCGCCAGATTCATCCGAGTTTTATCAAGCAAGGCCAGATAACTTCCCAGGCATTCCGCCCT ACAATCAAGGATGATAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MSSTLNNIEFLSPRLVGERFSGHAIPLEVLRDLAVLEEMLVETAKWGYMQEHPDRKRIPRGFTNGVSLKLTGIEEGSAIP KIALFFTLAGSSLNLFPSDNAHYFHRAKNSIVNAVNAAEQNRDVKEYLPENLLCYFDRIGRSLRDGESLELNPADRAQPA RLNKTTRRKLLLASSNVMELTEEITLRGSIPAADQAKMTFDLHIISGPTVSGPISPQHCDIVKDAFMRYGHGGIVMLQGI GRFNRNNRLQSIDSVEHISLLDSNDVLVQLDELRSLENGWLDGEGVAPGKEGLDWLVGYFETYYSDELPVPCIYPTPEGG VQIEWGLNGYEITLAVNIDTHQGDFHALNMSNDDEIIKSLDFNKLDDCVLLNQELKTLSEDEV
Sequences:
>Translated_383_residues MSSTLNNIEFLSPRLVGERFSGHAIPLEVLRDLAVLEEMLVETAKWGYMQEHPDRKRIPRGFTNGVSLKLTGIEEGSAIP KIALFFTLAGSSLNLFPSDNAHYFHRAKNSIVNAVNAAEQNRDVKEYLPENLLCYFDRIGRSLRDGESLELNPADRAQPA RLNKTTRRKLLLASSNVMELTEEITLRGSIPAADQAKMTFDLHIISGPTVSGPISPQHCDIVKDAFMRYGHGGIVMLQGI GRFNRNNRLQSIDSVEHISLLDSNDVLVQLDELRSLENGWLDGEGVAPGKEGLDWLVGYFETYYSDELPVPCIYPTPEGG VQIEWGLNGYEITLAVNIDTHQGDFHALNMSNDDEIIKSLDFNKLDDCVLLNQELKTLSEDEV >Mature_382_residues SSTLNNIEFLSPRLVGERFSGHAIPLEVLRDLAVLEEMLVETAKWGYMQEHPDRKRIPRGFTNGVSLKLTGIEEGSAIPK IALFFTLAGSSLNLFPSDNAHYFHRAKNSIVNAVNAAEQNRDVKEYLPENLLCYFDRIGRSLRDGESLELNPADRAQPAR LNKTTRRKLLLASSNVMELTEEITLRGSIPAADQAKMTFDLHIISGPTVSGPISPQHCDIVKDAFMRYGHGGIVMLQGIG RFNRNNRLQSIDSVEHISLLDSNDVLVQLDELRSLENGWLDGEGVAPGKEGLDWLVGYFETYYSDELPVPCIYPTPEGGV QIEWGLNGYEITLAVNIDTHQGDFHALNMSNDDEIIKSLDFNKLDDCVLLNQELKTLSEDEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42770; Mature: 42639
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTLNNIEFLSPRLVGERFSGHAIPLEVLRDLAVLEEMLVETAKWGYMQEHPDRKRIPR CCCCCCCHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHCCC GFTNGVSLKLTGIEEGSAIPKIALFFTLAGSSLNLFPSDNAHYFHRAKNSIVNAVNAAEQ CCCCCEEEEEEECCCCCCCCEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH NRDVKEYLPENLLCYFDRIGRSLRDGESLELNPADRAQPARLNKTTRRKLLLASSNVMEL CCCHHHHCCHHHHHHHHHHCHHHCCCCCEECCCCCCCCCCCCCHHHHHEEEEECCCHHHH TEEITLRGSIPAADQAKMTFDLHIISGPTVSGPISPQHCDIVKDAFMRYGHGGIVMLQGI HHHHEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECC GRFNRNNRLQSIDSVEHISLLDSNDVLVQLDELRSLENGWLDGEGVAPGKEGLDWLVGYF CCCCCCCCHHHHCCHHEEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH ETYYSDELPVPCIYPTPEGGVQIEWGLNGYEITLAVNIDTHQGDFHALNMSNDDEIIKSL HHHCCCCCCCCEECCCCCCCEEEEECCCCEEEEEEEEEECCCCCEEEECCCCHHHHHHHC DFNKLDDCVLLNQELKTLSEDEV CCCCCCCCEEECHHHHHHCCCCC >Mature Secondary Structure SSTLNNIEFLSPRLVGERFSGHAIPLEVLRDLAVLEEMLVETAKWGYMQEHPDRKRIPR CCCCCCHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHCCC GFTNGVSLKLTGIEEGSAIPKIALFFTLAGSSLNLFPSDNAHYFHRAKNSIVNAVNAAEQ CCCCCEEEEEEECCCCCCCCEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH NRDVKEYLPENLLCYFDRIGRSLRDGESLELNPADRAQPARLNKTTRRKLLLASSNVMEL CCCHHHHCCHHHHHHHHHHCHHHCCCCCEECCCCCCCCCCCCCHHHHHEEEEECCCHHHH TEEITLRGSIPAADQAKMTFDLHIISGPTVSGPISPQHCDIVKDAFMRYGHGGIVMLQGI HHHHEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECC GRFNRNNRLQSIDSVEHISLLDSNDVLVQLDELRSLENGWLDGEGVAPGKEGLDWLVGYF CCCCCCCCHHHHCCHHEEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH ETYYSDELPVPCIYPTPEGGVQIEWGLNGYEITLAVNIDTHQGDFHALNMSNDDEIIKSL HHHCCCCCCCCEECCCCCCCEEEEECCCCEEEEEEEEEECCCCCEEEECCCCHHHHHHHC DFNKLDDCVLLNQELKTLSEDEV CCCCCCCCEEECHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA