| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357087
Identifier: 119357087
GI number: 119357087
Start: 1452628
End: 1454106
Strand: Reverse
Name: 119357087
Synonym: Cpha266_1274
Alternate gene names: NA
Gene position: 1454106-1452628 (Counterclockwise)
Preceding gene: 119357088
Following gene: 119357084
Centisome position: 46.4
GC content: 34.89
Gene sequence:
>1479_bases ATGAAAAAACCGGTCATTATTATCGGAATTGCTGTTGCCATCTTAGCCGCAGCTCTGGCTTTATTTATTCAAAACAGGAT AAATAATCAAGTCAATGCTCCGAAAGCAATAACAGAAGATATTGTGATTGATGTTTTGCCTTCTGCATTTAACATTCCTG TCAGTTATGATATCGAAAAACTTGAAGAATTATTAAATAATAAATTATCCGGCAAGTTTCTCGAAAAGAATATTTTTCTT CAGGAAACAAAAAAAGAACAAATTACTTTAACCCTTACAAAACAGAGCAATATTGAGATATCGTCAAACGGAAAAGAACT TCTTTGTCGATTTCCATTGCATGTTGATGCGAAACTTATTGAAAGCAGATTTGGAAACTTTTTGACAAAACAAGTTAGTG ATTTTCATACAACGATTATTATCACTTTATCAACTCCGGTTGATATCGATAATAAATGGCGTATTGTCACTCACTTCAGA ATTAACAAACACCGCTGGATCAATGAACCCATCGTAAAACTCGGACCATTCAGGAAAAACATAAAAAAAGAGTTGGATCA GGCAATAGTTGAAAGTGGTCATGAGTTAACGGAAATGCTTGATAATGAGATATTCAAACAGGAAATATTAAGACCGGCCA TTGCAGATGTATGGCTTGATTTGCAAGATCCTATTATGATAAAAAAAGAACATCCTCAAGCATGGATCAGATTTTTCTGC AATGACATAAAAGGGAAAATCGACCTTAACCGCAACAACATCACCTGTTATACCAGGGTTAACGCGCAGATGCTGATGTT GACCGATACAGCAACAGCCGTTATCCCCAAGCCTTTACCGGATTTGAAACCACTTAAGGAAGCTGAAATAACGCCCCGTT CCGATATCAACTTATATGCCTATACCTCCTTTGACATCATCAACGAGCAGTTGAATCGTCTGTTGAAGGGAAAAATATTT ACTTCGAGAGGATATACCGTCTCTATCAAAAAGTTAAAGGCATATGCGTCGATAAAGGGATTATCGGTACAGGTTATTAC TGACAAAGATATAAAAGGAGATTTAGTTGCCAGCGGACAATTGTTTTATGATGTTCCCCACCAGAAACTTATAGTACAAA AATTTGATTTTTCACTGGATACTAAAAATAATTTTATCAACACTGGCGAAGAAATATTGCATGATGTGATCAGGGACTCT ATTGCATCAAAGCTTACGTTTGATCTTGACCATTTGATTGGCAGGGTTCCAACTATTATTAACACTGCTCTTGCAAAAGG AAAACCGGGAAAAGTAATTCACTTTACTGTTGATAATTTCGTTATAAATAAATGCGCCATTATTATGGATAATAAAAATA TAAATTTTAAAATAAATGCCGGTTTGGATGCCGATTTGAAAATTATAAATATAAAATCGGGAAAATTAATCCGTATAAGA GATAAGCGTAATCGTATTATCCATAGAGATGCGCTATAG
Upstream 100 bases:
>100_bases GTTTTCATGCATAAACAAAATCGCCATCTTTTTGTAATCAGCTTTTACCCTCTCAATTCGATGAGATGCTATAAGACATG AATCGCAGAACAGGCTCATC
Downstream 100 bases:
>100_bases TTTCTTTACATAATTTATATTATAAAACAGATATAATTATATAAAAAACACTCATGAATGCAATGATTAATATTATAGCA TTCATGTTGAAACATCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MKKPVIIIGIAVAILAAALALFIQNRINNQVNAPKAITEDIVIDVLPSAFNIPVSYDIEKLEELLNNKLSGKFLEKNIFL QETKKEQITLTLTKQSNIEISSNGKELLCRFPLHVDAKLIESRFGNFLTKQVSDFHTTIIITLSTPVDIDNKWRIVTHFR INKHRWINEPIVKLGPFRKNIKKELDQAIVESGHELTEMLDNEIFKQEILRPAIADVWLDLQDPIMIKKEHPQAWIRFFC NDIKGKIDLNRNNITCYTRVNAQMLMLTDTATAVIPKPLPDLKPLKEAEITPRSDINLYAYTSFDIINEQLNRLLKGKIF TSRGYTVSIKKLKAYASIKGLSVQVITDKDIKGDLVASGQLFYDVPHQKLIVQKFDFSLDTKNNFINTGEEILHDVIRDS IASKLTFDLDHLIGRVPTIINTALAKGKPGKVIHFTVDNFVINKCAIIMDNKNINFKINAGLDADLKIINIKSGKLIRIR DKRNRIIHRDAL
Sequences:
>Translated_492_residues MKKPVIIIGIAVAILAAALALFIQNRINNQVNAPKAITEDIVIDVLPSAFNIPVSYDIEKLEELLNNKLSGKFLEKNIFL QETKKEQITLTLTKQSNIEISSNGKELLCRFPLHVDAKLIESRFGNFLTKQVSDFHTTIIITLSTPVDIDNKWRIVTHFR INKHRWINEPIVKLGPFRKNIKKELDQAIVESGHELTEMLDNEIFKQEILRPAIADVWLDLQDPIMIKKEHPQAWIRFFC NDIKGKIDLNRNNITCYTRVNAQMLMLTDTATAVIPKPLPDLKPLKEAEITPRSDINLYAYTSFDIINEQLNRLLKGKIF TSRGYTVSIKKLKAYASIKGLSVQVITDKDIKGDLVASGQLFYDVPHQKLIVQKFDFSLDTKNNFINTGEEILHDVIRDS IASKLTFDLDHLIGRVPTIINTALAKGKPGKVIHFTVDNFVINKCAIIMDNKNINFKINAGLDADLKIINIKSGKLIRIR DKRNRIIHRDAL >Mature_492_residues MKKPVIIIGIAVAILAAALALFIQNRINNQVNAPKAITEDIVIDVLPSAFNIPVSYDIEKLEELLNNKLSGKFLEKNIFL QETKKEQITLTLTKQSNIEISSNGKELLCRFPLHVDAKLIESRFGNFLTKQVSDFHTTIIITLSTPVDIDNKWRIVTHFR INKHRWINEPIVKLGPFRKNIKKELDQAIVESGHELTEMLDNEIFKQEILRPAIADVWLDLQDPIMIKKEHPQAWIRFFC NDIKGKIDLNRNNITCYTRVNAQMLMLTDTATAVIPKPLPDLKPLKEAEITPRSDINLYAYTSFDIINEQLNRLLKGKIF TSRGYTVSIKKLKAYASIKGLSVQVITDKDIKGDLVASGQLFYDVPHQKLIVQKFDFSLDTKNNFINTGEEILHDVIRDS IASKLTFDLDHLIGRVPTIINTALAKGKPGKVIHFTVDNFVINKCAIIMDNKNINFKINAGLDADLKIINIKSGKLIRIR DKRNRIIHRDAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56010; Mature: 56010
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPVIIIGIAVAILAAALALFIQNRINNQVNAPKAITEDIVIDVLPSAFNIPVSYDIEK CCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCCCCCHHH LEELLNNKLSGKFLEKNIFLQETKKEQITLTLTKQSNIEISSNGKELLCRFPLHVDAKLI HHHHHCCCCCCEEHHCCEEEEECCCCEEEEEEEECCCEEECCCCCEEEEECCCCCCHHHH ESRFGNFLTKQVSDFHTTIIITLSTPVDIDNKWRIVTHFRINKHRWINEPIVKLGPFRKN HHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHCCCHHHH IKKELDQAIVESGHELTEMLDNEIFKQEILRPAIADVWLDLQDPIMIKKEHPQAWIRFFC HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH NDIKGKIDLNRNNITCYTRVNAQMLMLTDTATAVIPKPLPDLKPLKEAEITPRSDINLYA HHCCCEEEECCCCEEEEEECCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCEEEE YTSFDIINEQLNRLLKGKIFTSRGYTVSIKKLKAYASIKGLSVQVITDKDIKGDLVASGQ EEHHHHHHHHHHHHHCCEEEECCCCEEEHHHHHHHHEECCCEEEEEECCCCCCCEEECCE LFYDVPHQKLIVQKFDFSLDTKNNFINTGEEILHDVIRDSIASKLTFDLDHLIGRVPTII EEEECCCHHEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH NTALAKGKPGKVIHFTVDNFVINKCAIIMDNKNINFKINAGLDADLKIINIKSGKLIRIR HHHHHCCCCCCEEEEEECCEEEEEEEEEEECCCEEEEEECCCCCCEEEEEECCCCEEEEE DKRNRIIHRDAL CCCCCCEECCCC >Mature Secondary Structure MKKPVIIIGIAVAILAAALALFIQNRINNQVNAPKAITEDIVIDVLPSAFNIPVSYDIEK CCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCCCCCHHH LEELLNNKLSGKFLEKNIFLQETKKEQITLTLTKQSNIEISSNGKELLCRFPLHVDAKLI HHHHHCCCCCCEEHHCCEEEEECCCCEEEEEEEECCCEEECCCCCEEEEECCCCCCHHHH ESRFGNFLTKQVSDFHTTIIITLSTPVDIDNKWRIVTHFRINKHRWINEPIVKLGPFRKN HHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHCCCHHHH IKKELDQAIVESGHELTEMLDNEIFKQEILRPAIADVWLDLQDPIMIKKEHPQAWIRFFC HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH NDIKGKIDLNRNNITCYTRVNAQMLMLTDTATAVIPKPLPDLKPLKEAEITPRSDINLYA HHCCCEEEECCCCEEEEEECCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCEEEE YTSFDIINEQLNRLLKGKIFTSRGYTVSIKKLKAYASIKGLSVQVITDKDIKGDLVASGQ EEHHHHHHHHHHHHHCCEEEECCCCEEEHHHHHHHHEECCCEEEEEECCCCCCCEEECCE LFYDVPHQKLIVQKFDFSLDTKNNFINTGEEILHDVIRDSIASKLTFDLDHLIGRVPTII EEEECCCHHEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH NTALAKGKPGKVIHFTVDNFVINKCAIIMDNKNINFKINAGLDADLKIINIKSGKLIRIR HHHHHCCCCCCEEEEEECCEEEEEEEEEEECCCEEEEEECCCCCCEEEEEECCCCEEEEE DKRNRIIHRDAL CCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA