| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357039
Identifier: 119357039
GI number: 119357039
Start: 1394165
End: 1394815
Strand: Reverse
Name: 119357039
Synonym: Cpha266_1225
Alternate gene names: NA
Gene position: 1394815-1394165 (Counterclockwise)
Preceding gene: 119357040
Following gene: 119357038
Centisome position: 44.51
GC content: 56.07
Gene sequence:
>651_bases ATGGAAACAATAGCCAAACAGATTACCGGAGCCGGGCTGGGCGAGCGTGTCGTATCAGAAGCCCAGTTGTCCCGACTGCT CGATGGCACGCCGCAACGCCGCTACAATCTGGTCAACCGGGCATTGCATCGCGGGGATCTGGTGCGCTTGCGACGCGGCC GTTACCTGCTCGCATCGGCTGTAGAGCAAGGTAAAATGCACCCTTTTGTACTAGCCCAGGCATTGCTGCCGGGATCGTAT ATCTCAATGGAAACAGCACTGAGTTTTCATGGATGGATTCCGGAATCGACGCCGATCACCCTGTCTGTCACGCCACACAG GCGTCGGGAGACTCTCGACATTCCGAAATTCGGTCAATTCAAGTATTACCCGCTAGCGCTGAACAAGGGCTGGTTTCTGG AACAGGTCGATCGGGAATCCCATGCCGGACAGAGCTTTCTGATTGCACAGCCGTTACGGGCGTTGCTCGACATTTTCTGC CTGCGCAAACGTGACTATCCCGGCCTCAGCAGCCTGACTGAAGGCATGCGCATCGATGCGGACGAGCTCGCCGCCATCAG CCATGACGATATGGAAAAAATGCGCCCGGTCTATCAGCATAAACGCATGGACACCTTCATCTCCGCCATGCAAAGGGAGT TGCTGCCATGA
Upstream 100 bases:
>100_bases TTTGCGCTCCTGAACCACGTCCTGCAGAATCCTCCACAAATCAGCACGCAATCGTAAACGAATGTTTGAAACTTTCATAA AATGAAAGTATCTTGCATTA
Downstream 100 bases:
>100_bases TCGATATGCTTCGCAAACGGCTGGAGCGTTATGCAGCCTCCAATGCAAAACAGGAGGAGCAGGCGCTCAAGGAAATCCTG CAGGAAGTGGCGCTTTACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues METIAKQITGAGLGERVVSEAQLSRLLDGTPQRRYNLVNRALHRGDLVRLRRGRYLLASAVEQGKMHPFVLAQALLPGSY ISMETALSFHGWIPESTPITLSVTPHRRRETLDIPKFGQFKYYPLALNKGWFLEQVDRESHAGQSFLIAQPLRALLDIFC LRKRDYPGLSSLTEGMRIDADELAAISHDDMEKMRPVYQHKRMDTFISAMQRELLP
Sequences:
>Translated_216_residues METIAKQITGAGLGERVVSEAQLSRLLDGTPQRRYNLVNRALHRGDLVRLRRGRYLLASAVEQGKMHPFVLAQALLPGSY ISMETALSFHGWIPESTPITLSVTPHRRRETLDIPKFGQFKYYPLALNKGWFLEQVDRESHAGQSFLIAQPLRALLDIFC LRKRDYPGLSSLTEGMRIDADELAAISHDDMEKMRPVYQHKRMDTFISAMQRELLP >Mature_216_residues METIAKQITGAGLGERVVSEAQLSRLLDGTPQRRYNLVNRALHRGDLVRLRRGRYLLASAVEQGKMHPFVLAQALLPGSY ISMETALSFHGWIPESTPITLSVTPHRRRETLDIPKFGQFKYYPLALNKGWFLEQVDRESHAGQSFLIAQPLRALLDIFC LRKRDYPGLSSLTEGMRIDADELAAISHDDMEKMRPVYQHKRMDTFISAMQRELLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24646; Mature: 24646
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METIAKQITGAGLGERVVSEAQLSRLLDGTPQRRYNLVNRALHRGDLVRLRRGRYLLASA CCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHH VEQGKMHPFVLAQALLPGSYISMETALSFHGWIPESTPITLSVTPHRRRETLDIPKFGQF HHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCE KYYPLALNKGWFLEQVDRESHAGQSFLIAQPLRALLDIFCLRKRDYPGLSSLTEGMRIDA EEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCH DELAAISHDDMEKMRPVYQHKRMDTFISAMQRELLP HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure METIAKQITGAGLGERVVSEAQLSRLLDGTPQRRYNLVNRALHRGDLVRLRRGRYLLASA CCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHH VEQGKMHPFVLAQALLPGSYISMETALSFHGWIPESTPITLSVTPHRRRETLDIPKFGQF HHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCE KYYPLALNKGWFLEQVDRESHAGQSFLIAQPLRALLDIFCLRKRDYPGLSSLTEGMRIDA EEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCH DELAAISHDDMEKMRPVYQHKRMDTFISAMQRELLP HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA