Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119357038

Identifier: 119357038

GI number: 119357038

Start: 1393311

End: 1394168

Strand: Reverse

Name: 119357038

Synonym: Cpha266_1224

Alternate gene names: NA

Gene position: 1394168-1393311 (Counterclockwise)

Preceding gene: 119357039

Following gene: 119357037

Centisome position: 44.49

GC content: 53.15

Gene sequence:

>858_bases
ATGATCGATATGCTTCGCAAACGGCTGGAGCGTTATGCAGCCTCCAATGCAAAACAGGAGGAGCAGGCGCTCAAGGAAAT
CCTGCAGGAAGTGGCGCTTTACGGGTTATGGCGCGCTGGCTTTTTTCAGGTTGCTGCCTTTCAGGGAGGCACTTGTCTGC
GCATTCTGCACGGGCTGCCTCGTTTTTCGGAAGACCTTGACTTCATGCTGCGCTCCCCCGACAAGGAGTTCCGATGGCAT
CCATATTTCGAAACCCTTGAATCGGTAATGGCTGAATTCGGTATCCGCTGCAAACTGGTCGATAAAGGCAATATGGATCG
AGCGGTTCGTCAGGCTTTACTGAAAGACGATTCTTTTGCACGACAGATCAACCTTTCGTTTTATGGCAACCAGAACCCGC
GGAAACTGAAGATCAAACTCGAAATCGACACGAAGCCACCGGAAGGCTCGGCATTCGAGTACCGTTATCTCGATTTTCCG
CTCGACTTCGAACTCTGCGCCCAGACGCTGTCGGGCAATTTCTCGCTCAAGATTCATGCACTGCTCTGCCGCCCATATAT
CAAGGGTCGAGACTGGTTTGATTTCGGCTGGTATGTCACCCAGGAGGTCTCACCAAATCTATTGCTTCTTGAAAACGCTC
TCCGGCAATATGGTCCGTGGGCAGGACAGCACCAGAGCGTCGATAAGGAGTGGCTCAATAAAGCATTGAGCGACAGGATC
GGCTCCATCGACTGGGCGCAAGCCGCCGGGGATGTCGCACCGTTCCTGCCGCCTGCATTCCAGCAAAGTCTCCGGCTTTG
GAGCCGTCAATTCTTCGCCGAAAAGCTCGCAACACTCATGAAGAGGCTTCAGGAATAG

Upstream 100 bases:

>100_bases
TCGCCGCCATCAGCCATGACGATATGGAAAAAATGCGCCCGGTCTATCAGCATAAACGCATGGACACCTTCATCTCCGCC
ATGCAAAGGGAGTTGCTGCC

Downstream 100 bases:

>100_bases
TGAACCCGCAGTTCGAAGACGATTATCAGTAGCGATGCTTCCAATCCGCCCTCTCAGCAGTTGCGATGATGCAGGGTAAC
GCCTCAATAAATTGTATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MIDMLRKRLERYAASNAKQEEQALKEILQEVALYGLWRAGFFQVAAFQGGTCLRILHGLPRFSEDLDFMLRSPDKEFRWH
PYFETLESVMAEFGIRCKLVDKGNMDRAVRQALLKDDSFARQINLSFYGNQNPRKLKIKLEIDTKPPEGSAFEYRYLDFP
LDFELCAQTLSGNFSLKIHALLCRPYIKGRDWFDFGWYVTQEVSPNLLLLENALRQYGPWAGQHQSVDKEWLNKALSDRI
GSIDWAQAAGDVAPFLPPAFQQSLRLWSRQFFAEKLATLMKRLQE

Sequences:

>Translated_285_residues
MIDMLRKRLERYAASNAKQEEQALKEILQEVALYGLWRAGFFQVAAFQGGTCLRILHGLPRFSEDLDFMLRSPDKEFRWH
PYFETLESVMAEFGIRCKLVDKGNMDRAVRQALLKDDSFARQINLSFYGNQNPRKLKIKLEIDTKPPEGSAFEYRYLDFP
LDFELCAQTLSGNFSLKIHALLCRPYIKGRDWFDFGWYVTQEVSPNLLLLENALRQYGPWAGQHQSVDKEWLNKALSDRI
GSIDWAQAAGDVAPFLPPAFQQSLRLWSRQFFAEKLATLMKRLQE
>Mature_285_residues
MIDMLRKRLERYAASNAKQEEQALKEILQEVALYGLWRAGFFQVAAFQGGTCLRILHGLPRFSEDLDFMLRSPDKEFRWH
PYFETLESVMAEFGIRCKLVDKGNMDRAVRQALLKDDSFARQINLSFYGNQNPRKLKIKLEIDTKPPEGSAFEYRYLDFP
LDFELCAQTLSGNFSLKIHALLCRPYIKGRDWFDFGWYVTQEVSPNLLLLENALRQYGPWAGQHQSVDKEWLNKALSDRI
GSIDWAQAAGDVAPFLPPAFQQSLRLWSRQFFAEKLATLMKRLQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33172; Mature: 33172

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDMLRKRLERYAASNAKQEEQALKEILQEVALYGLWRAGFFQVAAFQGGTCLRILHGLP
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
RFSEDLDFMLRSPDKEFRWHPYFETLESVMAEFGIRCKLVDKGNMDRAVRQALLKDDSFA
CCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCHH
RQINLSFYGNQNPRKLKIKLEIDTKPPEGSAFEYRYLDFPLDFELCAQTLSGNFSLKIHA
HEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEE
LLCRPYIKGRDWFDFGWYVTQEVSPNLLLLENALRQYGPWAGQHQSVDKEWLNKALSDRI
EEECHHHCCCCEEECCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
GSIDWAQAAGDVAPFLPPAFQQSLRLWSRQFFAEKLATLMKRLQE
CCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDMLRKRLERYAASNAKQEEQALKEILQEVALYGLWRAGFFQVAAFQGGTCLRILHGLP
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
RFSEDLDFMLRSPDKEFRWHPYFETLESVMAEFGIRCKLVDKGNMDRAVRQALLKDDSFA
CCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCHH
RQINLSFYGNQNPRKLKIKLEIDTKPPEGSAFEYRYLDFPLDFELCAQTLSGNFSLKIHA
HEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEE
LLCRPYIKGRDWFDFGWYVTQEVSPNLLLLENALRQYGPWAGQHQSVDKEWLNKALSDRI
EEECHHHCCCCEEECCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
GSIDWAQAAGDVAPFLPPAFQQSLRLWSRQFFAEKLATLMKRLQE
CCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA