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The map label for this gene is 119357025

Identifier: 119357025

GI number: 119357025

Start: 1377578

End: 1378351

Strand: Reverse

Name: 119357025

Synonym: Cpha266_1210

Alternate gene names: NA

Gene position: 1378351-1377578 (Counterclockwise)

Preceding gene: 119357028

Following gene: 119357024

Centisome position: 43.98

GC content: 58.79

Gene sequence:

>774_bases
ATGAAGAAGTTGAGACCGAGTGGCGGCTATCGTAAAGCTGCCAGTTTTCAGACGGCTACTCTGATTTACGATGCCACCTA
CTGGTTTTGCGAGAAGTTCATCGATTCGAGATCGCGGACGCTTGACCAGATGATTCAGGCTGCACGTTCAGGTCGGCAGA
ACATCGCGGAAGGCAGTCGCGCTGCGGCGACCTCTTCGCAGACTGAACTGCGGTTGGTCAATGTTGCGCGATCGAGCCTC
GAAGAGCTTCTGCTCGACTATGAAGACTACCTTCGCCATCGGCATCTGAGGCAGTGGGCATCGTCGAGCGCTGAAGCGAG
TGCTGTTCGCGAAGTTCCGCAGCGGTTCAAGAGAGATCGGTCAGCTCAGTCAAATCAGTCGGATCTGACTGAGCTGACTG
ATCTGACTGATCAGGAGCGCTGGGTGCTGTATGCTTTCTGGCTGGAGCATGAGAGTGCCGAGGTTCGGGCCAATGCGATC
ATCTGCCTGATCCATCAGGCGAACTACCTGCTCGACCGGCAGATTGCCTCGCTGGAGGCAGCCTTCGTTGAAGAGGGCGG
GTACAGCGAGCAACTTGCTGCCGCCCGTCTCGCCGAGCGGGAACGCAAGCGCAATGAGACCTCCCGGCATCCGACGCCTG
CCGGGGCCATACCTTCCTGCCCGCAATGCGGCAGCCCCATGGTGTTGCGAACGGCCAGGGCCGACAAAAACGAGGGGCAG
CAGTTCTGGGGCTGTACAGGCTATCCCGAGTGCCGTGGGGTGATAAAGGTCTGA

Upstream 100 bases:

>100_bases
TACCTTTACAAGGTATAATCGTTCAACACCTGACGTTCTTTGCGCACACCTGTACCGTTAAACCTGGTATGCGAAAAGGA
ACGATTTTTCATAGAACACC

Downstream 100 bases:

>100_bases
TTGATCCATCGGACCCGTCCGATCTGCTCAATGCGCTGAGTATGAAAACATGAAGGCAATAGTGCCGCCAAGTCCCTGTA
CCTGATAGCGAGTCGTCCCG

Product: DNA topoisomerase type IA Zn finger domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKKLRPSGGYRKAASFQTATLIYDATYWFCEKFIDSRSRTLDQMIQAARSGRQNIAEGSRAAATSSQTELRLVNVARSSL
EELLLDYEDYLRHRHLRQWASSSAEASAVREVPQRFKRDRSAQSNQSDLTELTDLTDQERWVLYAFWLEHESAEVRANAI
ICLIHQANYLLDRQIASLEAAFVEEGGYSEQLAAARLAERERKRNETSRHPTPAGAIPSCPQCGSPMVLRTARADKNEGQ
QFWGCTGYPECRGVIKV

Sequences:

>Translated_257_residues
MKKLRPSGGYRKAASFQTATLIYDATYWFCEKFIDSRSRTLDQMIQAARSGRQNIAEGSRAAATSSQTELRLVNVARSSL
EELLLDYEDYLRHRHLRQWASSSAEASAVREVPQRFKRDRSAQSNQSDLTELTDLTDQERWVLYAFWLEHESAEVRANAI
ICLIHQANYLLDRQIASLEAAFVEEGGYSEQLAAARLAERERKRNETSRHPTPAGAIPSCPQCGSPMVLRTARADKNEGQ
QFWGCTGYPECRGVIKV
>Mature_257_residues
MKKLRPSGGYRKAASFQTATLIYDATYWFCEKFIDSRSRTLDQMIQAARSGRQNIAEGSRAAATSSQTELRLVNVARSSL
EELLLDYEDYLRHRHLRQWASSSAEASAVREVPQRFKRDRSAQSNQSDLTELTDLTDQERWVLYAFWLEHESAEVRANAI
ICLIHQANYLLDRQIASLEAAFVEEGGYSEQLAAARLAERERKRNETSRHPTPAGAIPSCPQCGSPMVLRTARADKNEGQ
QFWGCTGYPECRGVIKV

Specific function: Unknown

COG id: COG0551

COG function: function code L; Zn-finger domain associated with topoisomerase type I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29123; Mature: 29123

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLRPSGGYRKAASFQTATLIYDATYWFCEKFIDSRSRTLDQMIQAARSGRQNIAEGSR
CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
AAATSSQTELRLVNVARSSLEELLLDYEDYLRHRHLRQWASSSAEASAVREVPQRFKRDR
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SAQSNQSDLTELTDLTDQERWVLYAFWLEHESAEVRANAIICLIHQANYLLDRQIASLEA
CCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHCEEEEEEEHHHHHHHHHHHHHHH
AFVEEGGYSEQLAAARLAERERKRNETSRHPTPAGAIPSCPQCGSPMVLRTARADKNEGQ
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
QFWGCTGYPECRGVIKV
CCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MKKLRPSGGYRKAASFQTATLIYDATYWFCEKFIDSRSRTLDQMIQAARSGRQNIAEGSR
CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
AAATSSQTELRLVNVARSSLEELLLDYEDYLRHRHLRQWASSSAEASAVREVPQRFKRDR
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SAQSNQSDLTELTDLTDQERWVLYAFWLEHESAEVRANAIICLIHQANYLLDRQIASLEA
CCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHCEEEEEEEHHHHHHHHHHHHHHH
AFVEEGGYSEQLAAARLAERERKRNETSRHPTPAGAIPSCPQCGSPMVLRTARADKNEGQ
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
QFWGCTGYPECRGVIKV
CCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA