| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356993
Identifier: 119356993
GI number: 119356993
Start: 1326726
End: 1327091
Strand: Reverse
Name: 119356993
Synonym: Cpha266_1176
Alternate gene names: NA
Gene position: 1327091-1326726 (Counterclockwise)
Preceding gene: 119356994
Following gene: 119356992
Centisome position: 42.35
GC content: 41.53
Gene sequence:
>366_bases ATGAAAAATCGCTTTGACTGTCAGAAACCGTTAATCTGTAAACCAGATCAGGGAGGTGATGATTATGATTCTATGATATG TTCGGTCAAAAATATGAGCATCAATAAATCTATCAAGGAGACAATTTCTATGGAAAAGGGTATAGCAAGCGCTGTCAGTA GCGGAAGAGTAAGGATTCCCTCTGATCTGTTGAAAAAGTTCCAGGCAGAAAAGAACGGTTTACAACACCGTATTGATATT TCAAACGGCATCCTTGTATTTCCTGAGGAGATACTCGCCACTTTAGGCTATGGGGAACTTACAAAAGCCGGGTTTGAGGT AGTCATTATGCCACGCGTTGCGCAACACAGTATCAAAGGTGCCTGA
Upstream 100 bases:
>100_bases TGTCAAGTGACTATTGCTAATGGATAAACGGTCTCATACATAAATCCTTCAATGAGTTTATGACAGGAGTTGGGGCTATC ACAAATCAGGTGCCGTTTGT
Downstream 100 bases:
>100_bases AAAACAACACAATCGCTTCTGTGCCGATGATGATTGATTTTTTTTTCATCCTGCAACCGTTTTCAACGTTCAGATCAAGG AGATCATAATGCCCGAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKNRFDCQKPLICKPDQGGDDYDSMICSVKNMSINKSIKETISMEKGIASAVSSGRVRIPSDLLKKFQAEKNGLQHRIDI SNGILVFPEEILATLGYGELTKAGFEVVIMPRVAQHSIKGA
Sequences:
>Translated_121_residues MKNRFDCQKPLICKPDQGGDDYDSMICSVKNMSINKSIKETISMEKGIASAVSSGRVRIPSDLLKKFQAEKNGLQHRIDI SNGILVFPEEILATLGYGELTKAGFEVVIMPRVAQHSIKGA >Mature_121_residues MKNRFDCQKPLICKPDQGGDDYDSMICSVKNMSINKSIKETISMEKGIASAVSSGRVRIPSDLLKKFQAEKNGLQHRIDI SNGILVFPEEILATLGYGELTKAGFEVVIMPRVAQHSIKGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13298; Mature: 13298
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRFDCQKPLICKPDQGGDDYDSMICSVKNMSINKSIKETISMEKGIASAVSSGRVRIP CCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEECC SDLLKKFQAEKNGLQHRIDISNGILVFPEEILATLGYGELTKAGFEVVIMPRVAQHSIKG HHHHHHHHHHHCCCEEEEECCCCEEEECHHHHHHCCCCHHCCCCCEEEEECCHHHHCCCC A C >Mature Secondary Structure MKNRFDCQKPLICKPDQGGDDYDSMICSVKNMSINKSIKETISMEKGIASAVSSGRVRIP CCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEECC SDLLKKFQAEKNGLQHRIDISNGILVFPEEILATLGYGELTKAGFEVVIMPRVAQHSIKG HHHHHHHHHHHCCCEEEEECCCCEEEECHHHHHHCCCCHHCCCCCEEEEECCHHHHCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA