| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356966
Identifier: 119356966
GI number: 119356966
Start: 1295544
End: 1296362
Strand: Reverse
Name: 119356966
Synonym: Cpha266_1149
Alternate gene names: NA
Gene position: 1296362-1295544 (Counterclockwise)
Preceding gene: 119356967
Following gene: 119356964
Centisome position: 41.37
GC content: 46.76
Gene sequence:
>819_bases TTGATACCTCAAGCCTACATCATTGAATGGCGCAAAAACGCTCCTTGGTCACAGCCCTCTCAAGTTGAACAGGATCTCGT GATATGCAGGGCTCTGGTAGAAATATTCAGTAACTCTTTTCTGGCGGAAAGCCTCGCGTTTCGGGGAGGAACGGCACTCT TCAAACTGCACATGCCGCCAGTCAGATATTCCGAGGATATCGATCTTGTTCAGGCAAAAGCTGGTGCTATCAAACCGATC ATTGACGCATTGAGGGAGCGCCTTGATCATTGGCTGGGTGAACCGAAACGCAAACGTAGCGAAGGGCGGGTGACACTGCT TTACCGATTTACTTCTGAAGATAACCGGCCTTTACGGCTCAAGATAGAAATAAACACTCGTGAGCATTTTACCATTCACG GCTTTCAGCAACACCAATTTGCAATCAAATCACGCTGGTTCACCGGCAATACCACGATTCTGACCTATTCTCTCGAAGAG CTTCTGGGAACAAAACTACGAGCGCTCTACCAACGCAAAAAAGGGCGAGACTTGTTTGATCTTTGGTATTCCCTCAACAA AACAAATCAGCCACCCGACACCAGACTGATAATTGACTCATTTCTGAAGTACATGGAATATGCTGACCACCAAATCACCC GCGCAATGTTTGAACAAAACCTTCTGGAGAAAAAAAAGGATCCGCAATTTTCTGGAGATATTACCCCGTTACTGACAGCG GAAACCACTTGGAACTTTGATGTCGCTTTTGACGACGTCATGAACCAGTTGATATCGACTCTTCCCGGTAGTCCTTGGCT GGGACACAGCACTCTATAA
Upstream 100 bases:
>100_bases ATCCTGTACGCTCACCCCTGCTACCATCAGCTACAATCAAAGGCGCCAGGTTTAACAAGCGCTGGCAGATTTACGTTAAT ACCAAAGTGGAGTCAGAGAT
Downstream 100 bases:
>100_bases AATTTGATGATGAATTGCGTCCGCAGCGCGGACGTAATTGGAAACACTTAAAAAAATGCCAGTTGTACGTAGACTGCCAA ACGGAATAGCTTCTCCAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MIPQAYIIEWRKNAPWSQPSQVEQDLVICRALVEIFSNSFLAESLAFRGGTALFKLHMPPVRYSEDIDLVQAKAGAIKPI IDALRERLDHWLGEPKRKRSEGRVTLLYRFTSEDNRPLRLKIEINTREHFTIHGFQQHQFAIKSRWFTGNTTILTYSLEE LLGTKLRALYQRKKGRDLFDLWYSLNKTNQPPDTRLIIDSFLKYMEYADHQITRAMFEQNLLEKKKDPQFSGDITPLLTA ETTWNFDVAFDDVMNQLISTLPGSPWLGHSTL
Sequences:
>Translated_272_residues MIPQAYIIEWRKNAPWSQPSQVEQDLVICRALVEIFSNSFLAESLAFRGGTALFKLHMPPVRYSEDIDLVQAKAGAIKPI IDALRERLDHWLGEPKRKRSEGRVTLLYRFTSEDNRPLRLKIEINTREHFTIHGFQQHQFAIKSRWFTGNTTILTYSLEE LLGTKLRALYQRKKGRDLFDLWYSLNKTNQPPDTRLIIDSFLKYMEYADHQITRAMFEQNLLEKKKDPQFSGDITPLLTA ETTWNFDVAFDDVMNQLISTLPGSPWLGHSTL >Mature_272_residues MIPQAYIIEWRKNAPWSQPSQVEQDLVICRALVEIFSNSFLAESLAFRGGTALFKLHMPPVRYSEDIDLVQAKAGAIKPI IDALRERLDHWLGEPKRKRSEGRVTLLYRFTSEDNRPLRLKIEINTREHFTIHGFQQHQFAIKSRWFTGNTTILTYSLEE LLGTKLRALYQRKKGRDLFDLWYSLNKTNQPPDTRLIIDSFLKYMEYADHQITRAMFEQNLLEKKKDPQFSGDITPLLTA ETTWNFDVAFDDVMNQLISTLPGSPWLGHSTL
Specific function: Unknown
COG id: COG2253
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31717; Mature: 31717
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPQAYIIEWRKNAPWSQPSQVEQDLVICRALVEIFSNSFLAESLAFRGGTALFKLHMPP CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEECCC VRYSEDIDLVQAKAGAIKPIIDALRERLDHWLGEPKRKRSEGRVTLLYRFTSEDNRPLRL CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEEECCCCCCEEE KIEINTREHFTIHGFQQHQFAIKSRWFTGNTTILTYSLEELLGTKLRALYQRKKGRDLFD EEEECCCCEEEEECCHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCHHHH LWYSLNKTNQPPDTRLIIDSFLKYMEYADHQITRAMFEQNLLEKKKDPQFSGDITPLLTA HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE ETTWNFDVAFDDVMNQLISTLPGSPWLGHSTL CCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIPQAYIIEWRKNAPWSQPSQVEQDLVICRALVEIFSNSFLAESLAFRGGTALFKLHMPP CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEECCC VRYSEDIDLVQAKAGAIKPIIDALRERLDHWLGEPKRKRSEGRVTLLYRFTSEDNRPLRL CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEEECCCCCCEEE KIEINTREHFTIHGFQQHQFAIKSRWFTGNTTILTYSLEELLGTKLRALYQRKKGRDLFD EEEECCCCEEEEECCHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCHHHH LWYSLNKTNQPPDTRLIIDSFLKYMEYADHQITRAMFEQNLLEKKKDPQFSGDITPLLTA HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE ETTWNFDVAFDDVMNQLISTLPGSPWLGHSTL CCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA