| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is acpS [H]
Identifier: 119356928
GI number: 119356928
Start: 1251081
End: 1251449
Strand: Reverse
Name: acpS [H]
Synonym: Cpha266_1107
Alternate gene names: 119356928
Gene position: 1251449-1251081 (Counterclockwise)
Preceding gene: 119356929
Following gene: 119356927
Centisome position: 39.93
GC content: 47.15
Gene sequence:
>369_bases ATGGCAATCGTTCAGGAAATAGGAATGGACATTATTAATGTTGATCGCATCAGAACCTCCTGTAACCGCTATGGCGATCG CTTCCTCATGAAAATACTGACCGAAAACGAAATCGCCCTCTGTCGTAAAAAAGCCGATATGACGCAAAGCGTTGCGGCAA GATTTGCTGCGAAGGAGGCTCTTTCAAAAGCGTTGGGATGCGGAATCAGCAAGCAGTTCAACTGGCACAGCGTAGAGATT CTCAATAACCCGGAAGGCAAACCATTTGTCCGGGTGATCGACAAGCATTCGCCCCTCTCTGAAGCTTCGATCAGCATCTC GCTCTCTCATGACAAACAATATGCAACGGCTGTTGTACTGGTTTCATAA
Upstream 100 bases:
>100_bases AGTTCATTAATAAGATCAGCATCTTATTACAACTGAGTCGTTTCAGGCATACCCGACTCATCTTGCATGGTAACAGGTTT CATCATTCCATACAATATCA
Downstream 100 bases:
>100_bases CTATAAGGATTATTATATCCTTGAACCTGACTTATATAGGCCATTACCTCAAAAAATGTTACTTTATACCGTGTAATGAA CCTTTAAATAACACAGACAA
Product: holo-acyl-carrier-protein synthase
Products: NA
Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS [H]
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MAIVQEIGMDIINVDRIRTSCNRYGDRFLMKILTENEIALCRKKADMTQSVAARFAAKEALSKALGCGISKQFNWHSVEI LNNPEGKPFVRVIDKHSPLSEASISISLSHDKQYATAVVLVS
Sequences:
>Translated_122_residues MAIVQEIGMDIINVDRIRTSCNRYGDRFLMKILTENEIALCRKKADMTQSVAARFAAKEALSKALGCGISKQFNWHSVEI LNNPEGKPFVRVIDKHSPLSEASISISLSHDKQYATAVVLVS >Mature_121_residues AIVQEIGMDIINVDRIRTSCNRYGDRFLMKILTENEIALCRKKADMTQSVAARFAAKEALSKALGCGISKQFNWHSVEIL NNPEGKPFVRVIDKHSPLSEASISISLSHDKQYATAVVLVS
Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein [H]
COG id: COG0736
COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. AcpS family [H]
Homologues:
Organism=Escherichia coli, GI1788916, Length=125, Percent_Identity=33.6, Blast_Score=77, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008278 - InterPro: IPR002582 - InterPro: IPR004568 - ProDom: PD004282 [H]
Pfam domain/function: PF01648 ACPS [H]
EC number: =2.7.8.7 [H]
Molecular weight: Translated: 13551; Mature: 13420
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVQEIGMDIINVDRIRTSCNRYGDRFLMKILTENEIALCRKKADMTQSVAARFAAKEA CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LSKALGCGISKQFNWHSVEILNNPEGKPFVRVIDKHSPLSEASISISLSHDKQYATAVVL HHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEEE VS EC >Mature Secondary Structure AIVQEIGMDIINVDRIRTSCNRYGDRFLMKILTENEIALCRKKADMTQSVAARFAAKEA CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LSKALGCGISKQFNWHSVEILNNPEGKPFVRVIDKHSPLSEASISISLSHDKQYATAVVL HHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEEE VS EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]