| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356926
Identifier: 119356926
GI number: 119356926
Start: 1249692
End: 1250423
Strand: Reverse
Name: 119356926
Synonym: Cpha266_1105
Alternate gene names: NA
Gene position: 1250423-1249692 (Counterclockwise)
Preceding gene: 119356927
Following gene: 119356925
Centisome position: 39.9
GC content: 46.99
Gene sequence:
>732_bases ATGAGCAACATTCTCTGGAGCAAAGCCCTTGTTCCCGGCCCTGAAATCAATGAACAGCCATATACTTGCGAATATTACGG AGAGCAAATCCATATTCCCCGTTCAAAAGCGCTTCCGATAGAAGAACGCAAGGCCCCGCTCCCCGACCGAAAAGTTTACC GATCCATGAGCAGATCCGGCGTTCTGCTCTCGCTTGCATGTCTTGAAGGAACGGCGGCAATACAGCCATTTCTTGATATT TCTCCATTCAGTGTCGGCATATACTGCGCAATCGAAAATGGACCTGTCGATTTGGAATCAACCCGGAAAATGCTTGATGT CTCACGGGAAGATTTTGCCGAGCAGTACAGAAAAGTCAGGAACCCTAAAATGTTTCTCATGCAAGTCACCAATCTGGCAC CTGCCCAGATGGGGATATTTCTTGGCATTATGGGACCTTTAAATGTATACAACAGTTCAACTTATGGCAGCATTCACGCA CTTCGGCAGGCAGAGGCTGATCTTAATGCCGGACGCGTTACGGCGGCATTGGTATGCAGTGCCTTCAGTTTTGAAAATCC TCTGGTGCTTGAACGCATACGAAGGCAGAATCTGCACGAACGGATTTTATGCGAGGGTGCAGCAGCACTGCTCTTGACGG CTGATGAAAAACACTCTGAATGGCAGGATATAAACTTCGATGAAACGGAGTCTTATTATGGCATAAGTCATCAGATCATA ACACAACTATAA
Upstream 100 bases:
>100_bases ATGCCGAGGTGATGTATGGTCATATTGCAATTCCTGCAGAAAAAATGCCTGATGCCCCAAGCGGCGATTCTGCTTCCGGC AGAACAATAACGGGAGGAAT
Downstream 100 bases:
>100_bases AAAAAAGGGGGTTAAATGTTATCGGAAAAAGAGCTGTTCGAAAAGCTTGAGGATGCAATCCGGGCTGTTTTAAATACCGA AGAGGGCGATATCACGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSNILWSKALVPGPEINEQPYTCEYYGEQIHIPRSKALPIEERKAPLPDRKVYRSMSRSGVLLSLACLEGTAAIQPFLDI SPFSVGIYCAIENGPVDLESTRKMLDVSREDFAEQYRKVRNPKMFLMQVTNLAPAQMGIFLGIMGPLNVYNSSTYGSIHA LRQAEADLNAGRVTAALVCSAFSFENPLVLERIRRQNLHERILCEGAAALLLTADEKHSEWQDINFDETESYYGISHQII TQL
Sequences:
>Translated_243_residues MSNILWSKALVPGPEINEQPYTCEYYGEQIHIPRSKALPIEERKAPLPDRKVYRSMSRSGVLLSLACLEGTAAIQPFLDI SPFSVGIYCAIENGPVDLESTRKMLDVSREDFAEQYRKVRNPKMFLMQVTNLAPAQMGIFLGIMGPLNVYNSSTYGSIHA LRQAEADLNAGRVTAALVCSAFSFENPLVLERIRRQNLHERILCEGAAALLLTADEKHSEWQDINFDETESYYGISHQII TQL >Mature_242_residues SNILWSKALVPGPEINEQPYTCEYYGEQIHIPRSKALPIEERKAPLPDRKVYRSMSRSGVLLSLACLEGTAAIQPFLDIS PFSVGIYCAIENGPVDLESTRKMLDVSREDFAEQYRKVRNPKMFLMQVTNLAPAQMGIFLGIMGPLNVYNSSTYGSIHAL RQAEADLNAGRVTAALVCSAFSFENPLVLERIRRQNLHERILCEGAAALLLTADEKHSEWQDINFDETESYYGISHQIIT QL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27298; Mature: 27166
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNILWSKALVPGPEINEQPYTCEYYGEQIHIPRSKALPIEERKAPLPDRKVYRSMSRSG CCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCHHCCCCCCHHHHHHHHCCCC VLLSLACLEGTAAIQPFLDISPFSVGIYCAIENGPVDLESTRKMLDVSREDFAEQYRKVR EEEEEEECCCCHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHC NPKMFLMQVTNLAPAQMGIFLGIMGPLNVYNSSTYGSIHALRQAEADLNAGRVTAALVCS CCCEEEEEHHCCCHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH AFSFENPLVLERIRRQNLHERILCEGAAALLLTADEKHSEWQDINFDETESYYGISHQII HHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH TQL HCC >Mature Secondary Structure SNILWSKALVPGPEINEQPYTCEYYGEQIHIPRSKALPIEERKAPLPDRKVYRSMSRSG CCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCHHCCCCCCHHHHHHHHCCCC VLLSLACLEGTAAIQPFLDISPFSVGIYCAIENGPVDLESTRKMLDVSREDFAEQYRKVR EEEEEEECCCCHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHC NPKMFLMQVTNLAPAQMGIFLGIMGPLNVYNSSTYGSIHALRQAEADLNAGRVTAALVCS CCCEEEEEHHCCCHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH AFSFENPLVLERIRRQNLHERILCEGAAALLLTADEKHSEWQDINFDETESYYGISHQII HHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH TQL HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA