| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is sglT [H]
Identifier: 119356904
GI number: 119356904
Start: 1223760
End: 1225526
Strand: Reverse
Name: sglT [H]
Synonym: Cpha266_1083
Alternate gene names: 119356904
Gene position: 1225526-1223760 (Counterclockwise)
Preceding gene: 119356905
Following gene: 119356903
Centisome position: 39.11
GC content: 48.39
Gene sequence:
>1767_bases ATGGAGACATTAACGCTTCTTGACTACTCGTTTATTGTCGGATACCTTCTCCTGACGCTGTTTATCGGCTTGTTGTTTTC AAAAAAAGCCTCTGAAAATGTTGGCGAATTTTTTCTTTCAGGCAGAAAACTTCCCTGGTGGATTGCCGGAACCGGTATGG TTGCAACAACCTTTGCCGCTGACACGCCGCTTGCCGTAACAGGATTGGTAGCAAAAAACGGCATTGCCGGAAACTGGGTC TGGTGGACGTTTGTCTCCGGAGGAATGCTGACTGTTTTCTTTTTCGCAAGACTCTGGCGCCGATCAAACATCCTTACCGA CCTTGAATTTATCGAAATTCGATACAGCGGTACCGCCGCCAAATTTCTTCGCGGATTCAAGGCGCTCTATTTCGGACTTT TTATCAATTCGATCATTATCGGCTGGGTTAATCTTGCGATGTACAAGATAATAAGGATTATGGTTCCTGAACTCAACCCC GAAATCACGATCATAGCTCTTGTTGTTCTCACGACCGTCTACTCAGGACTTTCCGGGTTATGGGGCGTTTCTATTACTGA CGCGGTGCAGTTCATTATCGCCATGACCGGCTGCATCATCCTTGCCGTTCTTGCACTGCAGGCACCTGAAGTTGGAGGCA TCTCCGGTTTACAGCACGCACTTCCAGCCTGGATGTTTGACTTTTATCCCTCACTTTCCGGCTCCCGAGAAACGCCCGTT CAGGATAGCGGAGCGTTCTCGCTCCCCTTTGCATCGTTTGCCGCAATGGCATTTGTCCAATGGTGGGCGTCATGGTACCC TGGTTCCGAACCGGGAGGCGGCGGCTATATTGCCCAGCGAATGATGAGTGCCAAAGATGAAAAGCACTCTCTTCTTGCGA CACTCTGGTTTACCGTTGCTCACTACTGTCTTCGTCCATGGCCATGGATCATTGTCGCTCTTGCGAGTCTTGTCATGTTC CCCGACCTCCCCCTTGATCAGAAAGAGGACGGATTTGTCTATGTGATGAAAACCGTTCTGCCTTCGGGACTGAAAGGACT GCTTGTGGCCGCATTTCTTGCCGCGTACATGTCAACCCTTTCAACCCATCTCAACTGGGGAACAAGCTACCTGATTAACG ATTTCTATCAACGGTTTCTGAAGCCGGAGGCAGAAGCCGCGCATCTGGTAAAGGCGTCAAAAATCGTTACCGGTCTGATC GCAATTTTTTCGCTTTTTATCACGTTCTATGTACTTAAAACCATTACAGGGGCATGGGAATTCATTATTCAATGTGGTGC CGGCACAGGTTTTGTACTGATTTTCCGCTGGTTCTGGTGGCGACTGAACGCGTGGAGTGAAATCACCTCAATGCTTGCAC CTTTTCTTGCCTATGCATGGATTTCCTTTTTCACCTCAATCACCTTCCCGGACTCATTGTTCATTATCGTCCTGTTTACA ATATCGTCAACACTGATTGTAACATTTTTAACCCCTCCGACCGATACCGACCGCTTGCAGTCATTTTACAGAACCACAAG GGTTGGCGGCATTCTATGGAAAAAGATTTCCGTGACCATGCCGGAGGTTGAATCAGACAAGGGATTTATCATGCTTTTCA TTGATTGGCTGCTCGGCATTATCCTTGTTTACGCCGCACTGTTCGGAACCGGAAAACTCATCTTTGGAGATCCAATGCAA GCCGTTATCTACTTTGCAACCGCCCTCGGTGCAGGAACGCTCATCTACAAAGACCTGAACCGGCGAGGATGGAACAATCT GAAATGA
Upstream 100 bases:
>100_bases AACGTGCGATCTCGTCACAAAACGCTTTCTTAATAATTATGACCTGATCGCACATTTCGAACGATACCCCTGACGAAAAA ATTTTATCCATCGCAAGGCC
Downstream 100 bases:
>100_bases ACCTCGCCATGGAAAAGCCGTTATTGATACTTGCGTCACAATCTCCCCGCAGAAAGGAAATACTTTCTCTCATGCGGCAT ACTTTCGAGATTATTCCTGT
Product: Na+/solute symporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 588; Mature: 588
Protein sequence:
>588_residues METLTLLDYSFIVGYLLLTLFIGLLFSKKASENVGEFFLSGRKLPWWIAGTGMVATTFAADTPLAVTGLVAKNGIAGNWV WWTFVSGGMLTVFFFARLWRRSNILTDLEFIEIRYSGTAAKFLRGFKALYFGLFINSIIIGWVNLAMYKIIRIMVPELNP EITIIALVVLTTVYSGLSGLWGVSITDAVQFIIAMTGCIILAVLALQAPEVGGISGLQHALPAWMFDFYPSLSGSRETPV QDSGAFSLPFASFAAMAFVQWWASWYPGSEPGGGGYIAQRMMSAKDEKHSLLATLWFTVAHYCLRPWPWIIVALASLVMF PDLPLDQKEDGFVYVMKTVLPSGLKGLLVAAFLAAYMSTLSTHLNWGTSYLINDFYQRFLKPEAEAAHLVKASKIVTGLI AIFSLFITFYVLKTITGAWEFIIQCGAGTGFVLIFRWFWWRLNAWSEITSMLAPFLAYAWISFFTSITFPDSLFIIVLFT ISSTLIVTFLTPPTDTDRLQSFYRTTRVGGILWKKISVTMPEVESDKGFIMLFIDWLLGIILVYAALFGTGKLIFGDPMQ AVIYFATALGAGTLIYKDLNRRGWNNLK
Sequences:
>Translated_588_residues METLTLLDYSFIVGYLLLTLFIGLLFSKKASENVGEFFLSGRKLPWWIAGTGMVATTFAADTPLAVTGLVAKNGIAGNWV WWTFVSGGMLTVFFFARLWRRSNILTDLEFIEIRYSGTAAKFLRGFKALYFGLFINSIIIGWVNLAMYKIIRIMVPELNP EITIIALVVLTTVYSGLSGLWGVSITDAVQFIIAMTGCIILAVLALQAPEVGGISGLQHALPAWMFDFYPSLSGSRETPV QDSGAFSLPFASFAAMAFVQWWASWYPGSEPGGGGYIAQRMMSAKDEKHSLLATLWFTVAHYCLRPWPWIIVALASLVMF PDLPLDQKEDGFVYVMKTVLPSGLKGLLVAAFLAAYMSTLSTHLNWGTSYLINDFYQRFLKPEAEAAHLVKASKIVTGLI AIFSLFITFYVLKTITGAWEFIIQCGAGTGFVLIFRWFWWRLNAWSEITSMLAPFLAYAWISFFTSITFPDSLFIIVLFT ISSTLIVTFLTPPTDTDRLQSFYRTTRVGGILWKKISVTMPEVESDKGFIMLFIDWLLGIILVYAALFGTGKLIFGDPMQ AVIYFATALGAGTLIYKDLNRRGWNNLK >Mature_588_residues METLTLLDYSFIVGYLLLTLFIGLLFSKKASENVGEFFLSGRKLPWWIAGTGMVATTFAADTPLAVTGLVAKNGIAGNWV WWTFVSGGMLTVFFFARLWRRSNILTDLEFIEIRYSGTAAKFLRGFKALYFGLFINSIIIGWVNLAMYKIIRIMVPELNP EITIIALVVLTTVYSGLSGLWGVSITDAVQFIIAMTGCIILAVLALQAPEVGGISGLQHALPAWMFDFYPSLSGSRETPV QDSGAFSLPFASFAAMAFVQWWASWYPGSEPGGGGYIAQRMMSAKDEKHSLLATLWFTVAHYCLRPWPWIIVALASLVMF PDLPLDQKEDGFVYVMKTVLPSGLKGLLVAAFLAAYMSTLSTHLNWGTSYLINDFYQRFLKPEAEAAHLVKASKIVTGLI AIFSLFITFYVLKTITGAWEFIIQCGAGTGFVLIFRWFWWRLNAWSEITSMLAPFLAYAWISFFTSITFPDSLFIIVLFT ISSTLIVTFLTPPTDTDRLQSFYRTTRVGGILWKKISVTMPEVESDKGFIMLFIDWLLGIILVYAALFGTGKLIFGDPMQ AVIYFATALGAGTLIYKDLNRRGWNNLK
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI14140236, Length=430, Percent_Identity=25.1162790697674, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI4507031, Length=439, Percent_Identity=22.5512528473804, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI109659836, Length=563, Percent_Identity=23.9786856127886, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI4507033, Length=427, Percent_Identity=23.4192037470726, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI109659839, Length=579, Percent_Identity=22.7979274611399, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI17941285, Length=415, Percent_Identity=23.6144578313253, Blast_Score=73, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 65615; Mature: 65615
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METLTLLDYSFIVGYLLLTLFIGLLFSKKASENVGEFFLSGRKLPWWIAGTGMVATTFAA CCCEEHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHCCCCCCEEEECCCCEEEHCCC DTPLAVTGLVAKNGIAGNWVWWTFVSGGMLTVFFFARLWRRSNILTDLEFIEIRYSGTAA CCCHHHHHHHHCCCCCCCCCEEEHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHH KFLRGFKALYFGLFINSIIIGWVNLAMYKIIRIMVPELNPEITIIALVVLTTVYSGLSGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC WGVSITDAVQFIIAMTGCIILAVLALQAPEVGGISGLQHALPAWMFDFYPSLSGSRETPV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC QDSGAFSLPFASFAAMAFVQWWASWYPGSEPGGGGYIAQRMMSAKDEKHSLLATLWFTVA CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH HYCLRPWPWIIVALASLVMFPDLPLDQKEDGFVYVMKTVLPSGLKGLLVAAFLAAYMSTL HHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHH STHLNWGTSYLINDFYQRFLKPEAEAAHLVKASKIVTGLIAIFSLFITFYVLKTITGAWE HHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIIQCGAGTGFVLIFRWFWWRLNAWSEITSMLAPFLAYAWISFFTSITFPDSLFIIVLFT HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ISSTLIVTFLTPPTDTDRLQSFYRTTRVGGILWKKISVTMPEVESDKGFIMLFIDWLLGI HCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEHHHHHHHHHH ILVYAALFGTGKLIFGDPMQAVIYFATALGAGTLIYKDLNRRGWNNLK HHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure METLTLLDYSFIVGYLLLTLFIGLLFSKKASENVGEFFLSGRKLPWWIAGTGMVATTFAA CCCEEHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHCCCCCCEEEECCCCEEEHCCC DTPLAVTGLVAKNGIAGNWVWWTFVSGGMLTVFFFARLWRRSNILTDLEFIEIRYSGTAA CCCHHHHHHHHCCCCCCCCCEEEHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHH KFLRGFKALYFGLFINSIIIGWVNLAMYKIIRIMVPELNPEITIIALVVLTTVYSGLSGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC WGVSITDAVQFIIAMTGCIILAVLALQAPEVGGISGLQHALPAWMFDFYPSLSGSRETPV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC QDSGAFSLPFASFAAMAFVQWWASWYPGSEPGGGGYIAQRMMSAKDEKHSLLATLWFTVA CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH HYCLRPWPWIIVALASLVMFPDLPLDQKEDGFVYVMKTVLPSGLKGLLVAAFLAAYMSTL HHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHH STHLNWGTSYLINDFYQRFLKPEAEAAHLVKASKIVTGLIAIFSLFITFYVLKTITGAWE HHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIIQCGAGTGFVLIFRWFWWRLNAWSEITSMLAPFLAYAWISFFTSITFPDSLFIIVLFT HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ISSTLIVTFLTPPTDTDRLQSFYRTTRVGGILWKKISVTMPEVESDKGFIMLFIDWLLGI HCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEHHHHHHHHHH ILVYAALFGTGKLIFGDPMQAVIYFATALGAGTLIYKDLNRRGWNNLK HHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]