| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356857
Identifier: 119356857
GI number: 119356857
Start: 1168299
End: 1168673
Strand: Reverse
Name: 119356857
Synonym: Cpha266_1030
Alternate gene names: NA
Gene position: 1168673-1168299 (Counterclockwise)
Preceding gene: 119356858
Following gene: 119356856
Centisome position: 37.29
GC content: 48.27
Gene sequence:
>375_bases ATGAGCAGCGTCAAACCCTGTACCATTACCATCGAATGGGATGGCCCTGAAAACTTTTATTTCAGGTGCGATTACAGAGC CCCCGATCATCAACCAACAGCAACACGCTCTGTTGATAGCACGCGCTCTCTTCCCTTCATGACACAGGCCATGGGTAACG TGCTCAGAAAACTGAGAAAGGAGCATATCTCATTTCCCCTTTTTCTTATGGCAGTCGCATTCAACCACCGCAACCTGCTC AATGAAATCGACCAGTTGCTGCATCTTCTTCACCAGCATCTCGAAAAAGAGCAGAACTCCGGAACCTTTTCCTGTTACGT GGCGTCAGAGAAAAAACCGATGCCATTGAAAAGTCACGAGAGCGTTCATCCCTGA
Upstream 100 bases:
>100_bases CGGCGCATGGTTTTACACTGCCGTAACGGTAGAAATCTTTCAAAATCGCTATACTGAGAACAAAGCCGAAACTTTTCTGA CCCAAAAAATCGTGGCGTCC
Downstream 100 bases:
>100_bases AAACACCAAACCATCAAAACAGACGCAACACCCGACAGCACCTATTCTCTTATTGATCTACCACTGTAAAACAGAGCACT TTCGCTCAAATAACGGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSSVKPCTITIEWDGPENFYFRCDYRAPDHQPTATRSVDSTRSLPFMTQAMGNVLRKLRKEHISFPLFLMAVAFNHRNLL NEIDQLLHLLHQHLEKEQNSGTFSCYVASEKKPMPLKSHESVHP
Sequences:
>Translated_124_residues MSSVKPCTITIEWDGPENFYFRCDYRAPDHQPTATRSVDSTRSLPFMTQAMGNVLRKLRKEHISFPLFLMAVAFNHRNLL NEIDQLLHLLHQHLEKEQNSGTFSCYVASEKKPMPLKSHESVHP >Mature_123_residues SSVKPCTITIEWDGPENFYFRCDYRAPDHQPTATRSVDSTRSLPFMTQAMGNVLRKLRKEHISFPLFLMAVAFNHRNLLN EIDQLLHLLHQHLEKEQNSGTFSCYVASEKKPMPLKSHESVHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14367; Mature: 14235
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVKPCTITIEWDGPENFYFRCDYRAPDHQPTATRSVDSTRSLPFMTQAMGNVLRKLRK CCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH EHISFPLFLMAVAFNHRNLLNEIDQLLHLLHQHLEKEQNSGTFSCYVASEKKPMPLKSHE HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC SVHP CCCC >Mature Secondary Structure SSVKPCTITIEWDGPENFYFRCDYRAPDHQPTATRSVDSTRSLPFMTQAMGNVLRKLRK CCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH EHISFPLFLMAVAFNHRNLLNEIDQLLHLLHQHLEKEQNSGTFSCYVASEKKPMPLKSHE HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC SVHP CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA