| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356852
Identifier: 119356852
GI number: 119356852
Start: 1163654
End: 1164142
Strand: Reverse
Name: 119356852
Synonym: Cpha266_1025
Alternate gene names: NA
Gene position: 1164142-1163654 (Counterclockwise)
Preceding gene: 119356853
Following gene: 119356851
Centisome position: 37.15
GC content: 50.1
Gene sequence:
>489_bases ATGAAAAAAACATTCGCAACAATCCTGGTCGCCGCAGCGGTATTGGGATTTGGAAGCACATCGTTTGCCGGTAACGGAGG AAACATTAATCACGGAACACCTCTGTCGGACGACATCCTTGTTCTTCTTAATAGTCAATCGTCCACGGTCACGAATACAC AGAATAACCCAAGCATTACTGTCGGTGACATTTCTGCTGCTATTGCCAGCGCGACGGCACCTGCGTTTCTGACTCAGGGC GATATCGCTTACGCTGTGGCCTCTGCAACACAGGAATCATCATTTCCTGCACTTGAGTGGGTCGTAACACCGCTTGTTGC CGCTGGTGTAGGCTACGGTGATAACAATGGATCTGATGGTATGACCGTTGGCAATATTAATGTCGACGGAGCAGTTGGAT CCGGTGTTGGCGTAAACCTTGGTGGCGCCGTATTTGAATCGATCAACTCTGCCACCGCAATTGCTATCAACGGCTCACTG GGCAACTGA
Upstream 100 bases:
>100_bases AACAAGAGTTGCTGTTGAGCAGCGTTTACGACAGGACTCTTTAGTCGTGTTGTTCTGATGAAAAAAAACCTCTCTTAACA AAAACAAAAGGAGTCGCATC
Downstream 100 bases:
>100_bases TAACAATAAGGTACTGCCCGGCACAGCATAGTCCAGGCTTTCTCCCCGGTCGAAAAAAAACATGTTCGACCGGGGAGCGG GCAAACAAGATAAATACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKKTFATILVAAAVLGFGSTSFAGNGGNINHGTPLSDDILVLLNSQSSTVTNTQNNPSITVGDISAAIASATAPAFLTQG DIAYAVASATQESSFPALEWVVTPLVAAGVGYGDNNGSDGMTVGNINVDGAVGSGVGVNLGGAVFESINSATAIAINGSL GN
Sequences:
>Translated_162_residues MKKTFATILVAAAVLGFGSTSFAGNGGNINHGTPLSDDILVLLNSQSSTVTNTQNNPSITVGDISAAIASATAPAFLTQG DIAYAVASATQESSFPALEWVVTPLVAAGVGYGDNNGSDGMTVGNINVDGAVGSGVGVNLGGAVFESINSATAIAINGSL GN >Mature_162_residues MKKTFATILVAAAVLGFGSTSFAGNGGNINHGTPLSDDILVLLNSQSSTVTNTQNNPSITVGDISAAIASATAPAFLTQG DIAYAVASATQESSFPALEWVVTPLVAAGVGYGDNNGSDGMTVGNINVDGAVGSGVGVNLGGAVFESINSATAIAINGSL GN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15834; Mature: 15834
Theoretical pI: Translated: 3.68; Mature: 3.68
Prosite motif: PS00221 MIP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTFATILVAAAVLGFGSTSFAGNGGNINHGTPLSDDILVLLNSQSSTVTNTQNNPSIT CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCEE VGDISAAIASATAPAFLTQGDIAYAVASATQESSFPALEWVVTPLVAAGVGYGDNNGSDG ECHHHHHHHHCCCCCEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC MTVGNINVDGAVGSGVGVNLGGAVFESINSATAIAINGSLGN EEEECEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCC >Mature Secondary Structure MKKTFATILVAAAVLGFGSTSFAGNGGNINHGTPLSDDILVLLNSQSSTVTNTQNNPSIT CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCEE VGDISAAIASATAPAFLTQGDIAYAVASATQESSFPALEWVVTPLVAAGVGYGDNNGSDG ECHHHHHHHHCCCCCEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC MTVGNINVDGAVGSGVGVNLGGAVFESINSATAIAINGSLGN EEEECEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA