| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is yaaT [H]
Identifier: 119356839
GI number: 119356839
Start: 1152877
End: 1153851
Strand: Reverse
Name: yaaT [H]
Synonym: Cpha266_1012
Alternate gene names: 119356839
Gene position: 1153851-1152877 (Counterclockwise)
Preceding gene: 119356840
Following gene: 119356838
Centisome position: 36.82
GC content: 46.05
Gene sequence:
>975_bases ATGAGTTATGTTATATGCAGTTGTTTGCTTGCTGACAACACCAACGTACGACTCCGCCTTTCCCAGTTGCTGCACAATGA AATTGACAGAATTTACGGCGATTGTGATAACGAAGAGCCATGCTCGCTCTGTGAAATAGAGCTGCAGGGGTGCCGACGGG ATTTTTTTGAAAACAGAACAGGAGGGCCCCTTGCCATTGGAGAGCAGGTTGTTGTCGAATCCGATGGAGGCTATGATTTC GGAATAGTTTACTCTACAGGAAGAATCACCCGAAAAAAAGTTAAACTCAAAGGTCTCGACAGCAACAATGTCGTATGGCC GACGATCCTTCGACCGGCTGATAACGAGGACATGAAGCTTATCGAGGATTGCAGAAGGCGTCAATCCGATATTCGTGATA TCTGTCTGAAAAAGATTCAAAAACATGCGCTTGAACTCAAACTTGTTGACGTTGAACTTCGCATGGATCAGCAGAAGCTG TCCGTCTACTACACCTCATCGCACCGTGTCGATTTCAGAAATCTTGTAAGGGATCTTGCCGGTGAATTCAAGGCAAGAAT ACAGATGGTGCAGATCACTACCCGTGAAGAAGCTCGAAGAGCCAACGCATTCGGCCCTTGCGGTTGCCTGCTGTGCTGCT CAAGCTGGCTGCAGAAAATTCATGCAAACCCCTTTGCTGAAAAATCGAACTATCATGAAAGCGCATGCAGCGAAAGTCAT GCTTTTAACATTACCGGATTATGCAACCGCCCGAAATGCTGTATCGGTTATACAAAACAGGAATCATCATTTCAGGATAA CCGCCAGCAGGTTGAGTTTCCTCCTGTAGGAAGCCGGTTATCAACTCCGGAAGGTCCGGCAATTGTCGAAAGTATCGATA CCCGCAAAAAGCTCGTCTGCCTCTTTTACCAGAAAGGAGAGATGAGAAGGCGGTTCCCGATAGAAAAATTCAATTCCCTG TTTATTAAAAAGTAA
Upstream 100 bases:
>100_bases GAAGGTTGATAAATTTAGATGTTTTTTCCGACAGAGTAAAGGACACCGAAAGTAGGTCCCCCCTGTTTCAATATTGTCCA CTTTTAACGAATCCTATGCA
Downstream 100 bases:
>100_bases TCCAATCGATATCGAAATCGGTACCTTTTGAACTTATCCCTGAACTATGCTCCACGTTAAAAGAACGCTTGTCACCACAG CACTGCCCTACGCTAACGGC
Product: PSP1 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSYVICSCLLADNTNVRLRLSQLLHNEIDRIYGDCDNEEPCSLCEIELQGCRRDFFENRTGGPLAIGEQVVVESDGGYDF GIVYSTGRITRKKVKLKGLDSNNVVWPTILRPADNEDMKLIEDCRRRQSDIRDICLKKIQKHALELKLVDVELRMDQQKL SVYYTSSHRVDFRNLVRDLAGEFKARIQMVQITTREEARRANAFGPCGCLLCCSSWLQKIHANPFAEKSNYHESACSESH AFNITGLCNRPKCCIGYTKQESSFQDNRQQVEFPPVGSRLSTPEGPAIVESIDTRKKLVCLFYQKGEMRRRFPIEKFNSL FIKK
Sequences:
>Translated_324_residues MSYVICSCLLADNTNVRLRLSQLLHNEIDRIYGDCDNEEPCSLCEIELQGCRRDFFENRTGGPLAIGEQVVVESDGGYDF GIVYSTGRITRKKVKLKGLDSNNVVWPTILRPADNEDMKLIEDCRRRQSDIRDICLKKIQKHALELKLVDVELRMDQQKL SVYYTSSHRVDFRNLVRDLAGEFKARIQMVQITTREEARRANAFGPCGCLLCCSSWLQKIHANPFAEKSNYHESACSESH AFNITGLCNRPKCCIGYTKQESSFQDNRQQVEFPPVGSRLSTPEGPAIVESIDTRKKLVCLFYQKGEMRRRFPIEKFNSL FIKK >Mature_323_residues SYVICSCLLADNTNVRLRLSQLLHNEIDRIYGDCDNEEPCSLCEIELQGCRRDFFENRTGGPLAIGEQVVVESDGGYDFG IVYSTGRITRKKVKLKGLDSNNVVWPTILRPADNEDMKLIEDCRRRQSDIRDICLKKIQKHALELKLVDVELRMDQQKLS VYYTSSHRVDFRNLVRDLAGEFKARIQMVQITTREEARRANAFGPCGCLLCCSSWLQKIHANPFAEKSNYHESACSESHA FNITGLCNRPKCCIGYTKQESSFQDNRQQVEFPPVGSRLSTPEGPAIVESIDTRKKLVCLFYQKGEMRRRFPIEKFNSLF IKK
Specific function: Essential for the phosphorelay during initiation of sporulation. May control the level of phosphorylated spo0A through spo0E activity during sporulation [H]
COG id: COG1774
COG function: function code S; Uncharacterized homolog of PSP1
Gene ontology:
Cell location: Cytoplasm. Note=In the vegetative phase, localized throughout the periphery of the cell and the division septum. In the sporulation stages, fluorescence of the yaaT-GFP fusion protein was observed as two dots at the sides of an asymmetric septum and at th
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PSP1 C-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007557 [H]
Pfam domain/function: PF04468 PSP1 [H]
EC number: NA
Molecular weight: Translated: 37195; Mature: 37064
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVICSCLLADNTNVRLRLSQLLHNEIDRIYGDCDNEEPCSLCEIELQGCRRDFFENRT CCEEEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC GGPLAIGEQVVVESDGGYDFGIVYSTGRITRKKVKLKGLDSNNVVWPTILRPADNEDMKL CCCEEECCEEEEECCCCEEEEEEEECCCEEEEEEEEECCCCCCEEEEEEECCCCCCCHHH IEDCRRRQSDIRDICLKKIQKHALELKLVDVELRMDQQKLSVYYTSSHRVDFRNLVRDLA HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHH GEFKARIQMVQITTREEARRANAFGPCGCLLCCSSWLQKIHANPFAEKSNYHESACSESH HHHHHHEEEEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC AFNITGLCNRPKCCIGYTKQESSFQDNRQQVEFPPVGSRLSTPEGPAIVESIDTRKKLVC CEEEEECCCCCCEEEECCCCCCCHHCCCCEECCCCCCCCCCCCCCCHHHHHHHCCCEEEE LFYQKGEMRRRFPIEKFNSLFIKK EEECCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure SYVICSCLLADNTNVRLRLSQLLHNEIDRIYGDCDNEEPCSLCEIELQGCRRDFFENRT CEEEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC GGPLAIGEQVVVESDGGYDFGIVYSTGRITRKKVKLKGLDSNNVVWPTILRPADNEDMKL CCCEEECCEEEEECCCCEEEEEEEECCCEEEEEEEEECCCCCCEEEEEEECCCCCCCHHH IEDCRRRQSDIRDICLKKIQKHALELKLVDVELRMDQQKLSVYYTSSHRVDFRNLVRDLA HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHH GEFKARIQMVQITTREEARRANAFGPCGCLLCCSSWLQKIHANPFAEKSNYHESACSESH HHHHHHEEEEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC AFNITGLCNRPKCCIGYTKQESSFQDNRQQVEFPPVGSRLSTPEGPAIVESIDTRKKLVC CEEEEECCCCCCEEEECCCCCCCHHCCCCEECCCCCCCCCCCCCCCHHHHHHHCCCEEEE LFYQKGEMRRRFPIEKFNSLFIKK EEECCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]