| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is tatC [C]
Identifier: 119356814
GI number: 119356814
Start: 1126813
End: 1127718
Strand: Reverse
Name: tatC [C]
Synonym: Cpha266_0987
Alternate gene names: 119356814
Gene position: 1127718-1126813 (Counterclockwise)
Preceding gene: 119356817
Following gene: 119356813
Centisome position: 35.98
GC content: 46.69
Gene sequence:
>906_bases ATGAGTCAGGAGACAGAATCCACAAAACCGGAACCACAATTACCAGGTGAGGAAAAATCAGTTGAAAGCTCGCCCGATCT CGAACTTGAGGCAAATACAGACACATTCGCATCTTCAATGCCTGCCGACAGCCAAAACGATGTCAAGGAGCCTGAACCCA ATGGTGAAGATAAACAGGAACTGAATTTCATCGATCATCTTGAAGAGATCCGTTCAAGATTGATTAAAAGCGCCATTGCT CTGGTCGGAGTAACAGCAATTTGCGCCATCTATGCCGACGTTCTGGTCAATGAAGCGCTCATTGGCCCTCTGCAGAGAAG CGGCGAATCCATCATGCTGCAGAACCTCGTCCCCTACGGTCAGCTTTCGCTCTACTTTCAGGTGGTTCTGTTTGCGGGAT TCATCATTTCATTCCCGTTTATCGCCTTTCAGATCTGGAAATTTGTCGAACCGGGACTTCATGATCATGAACGAGAGGCG TCGCGGTTCATTATTCTCTTTATTTCACTCTGCTTCTTTGCAGGCATAGCTTTCGGGTATTTTATCTTTTTACCGATCTC GCTCAAATTTTTCGCAGGATTCGGAACTCCGCTCATTAAAAACAACATCGCCGTACAGGATTATATCAGCTTTGTCATGG GAACGCTGCTGACAACAGGGATCGTTTTCGAACTGCCGTTCATCTCCTACATCCTCTCAAAAATCGGCCTGCTCACCCCG GCATTCATGCGATTCTACCGCAAACATGCCATAGTCACCCTTCTTGTTGTTGCGGCTATCGTCACCCCATCAACCGATAT GGTAACCCAGTTGGTTATCGGTATCCCCATGATCCTGCTGTATGAGATCAGCATATGGATATCGAGCTATGTCAACAAGA AACAAAACGCACTCAAAACAGCATGA
Upstream 100 bases:
>100_bases AGGAAGAGAAAACATTTTTTGAATCCTTGCCTCTTTGTTGCTATGTTTTGAGGTTACAGGCAATCTTTCAAGGTTTACCA TCATCCATCCGAAAGCAGAC
Downstream 100 bases:
>100_bases AACAGGCTCTGAAATGAATCCACGCATCACGACGCTCAGAGTACCCGGAACAACATTGACGGGAAACCCTCTTGGCGACC CCGCTGAACGCGAAGTTCCG
Product: Sec-independent protein translocase TatC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSQETESTKPEPQLPGEEKSVESSPDLELEANTDTFASSMPADSQNDVKEPEPNGEDKQELNFIDHLEEIRSRLIKSAIA LVGVTAICAIYADVLVNEALIGPLQRSGESIMLQNLVPYGQLSLYFQVVLFAGFIISFPFIAFQIWKFVEPGLHDHEREA SRFIILFISLCFFAGIAFGYFIFLPISLKFFAGFGTPLIKNNIAVQDYISFVMGTLLTTGIVFELPFISYILSKIGLLTP AFMRFYRKHAIVTLLVVAAIVTPSTDMVTQLVIGIPMILLYEISIWISSYVNKKQNALKTA
Sequences:
>Translated_301_residues MSQETESTKPEPQLPGEEKSVESSPDLELEANTDTFASSMPADSQNDVKEPEPNGEDKQELNFIDHLEEIRSRLIKSAIA LVGVTAICAIYADVLVNEALIGPLQRSGESIMLQNLVPYGQLSLYFQVVLFAGFIISFPFIAFQIWKFVEPGLHDHEREA SRFIILFISLCFFAGIAFGYFIFLPISLKFFAGFGTPLIKNNIAVQDYISFVMGTLLTTGIVFELPFISYILSKIGLLTP AFMRFYRKHAIVTLLVVAAIVTPSTDMVTQLVIGIPMILLYEISIWISSYVNKKQNALKTA >Mature_300_residues SQETESTKPEPQLPGEEKSVESSPDLELEANTDTFASSMPADSQNDVKEPEPNGEDKQELNFIDHLEEIRSRLIKSAIAL VGVTAICAIYADVLVNEALIGPLQRSGESIMLQNLVPYGQLSLYFQVVLFAGFIISFPFIAFQIWKFVEPGLHDHEREAS RFIILFISLCFFAGIAFGYFIFLPISLKFFAGFGTPLIKNNIAVQDYISFVMGTLLTTGIVFELPFISYILSKIGLLTPA FMRFYRKHAIVTLLVVAAIVTPSTDMVTQLVIGIPMILLYEISIWISSYVNKKQNALKTA
Specific function: Required For Correct Localization Of Precursor Proteins Bearing Signal Peptides With The Twin Arginine Conserved Motif S/T-R-R-X-F-L-K. This Sec-Independent Pathway Is Termed Tat For Twin-Arginine Translocation System. This System Mainly Transports Protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=247, Percent_Identity=33.6032388663968, Blast_Score=121, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 33551; Mature: 33419
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQETESTKPEPQLPGEEKSVESSPDLELEANTDTFASSMPADSQNDVKEPEPNGEDKQE CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCCCCCCCCHHH LNFIDHLEEIRSRLIKSAIALVGVTAICAIYADVLVNEALIGPLQRSGESIMLQNLVPYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCH QLSLYFQVVLFAGFIISFPFIAFQIWKFVEPGLHDHEREASRFIILFISLCFFAGIAFGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FIFLPISLKFFAGFGTPLIKNNIAVQDYISFVMGTLLTTGIVFELPFISYILSKIGLLTP HHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFMRFYRKHAIVTLLVVAAIVTPSTDMVTQLVIGIPMILLYEISIWISSYVNKKQNALKT HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC A C >Mature Secondary Structure SQETESTKPEPQLPGEEKSVESSPDLELEANTDTFASSMPADSQNDVKEPEPNGEDKQE CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCCCCCCCCHHH LNFIDHLEEIRSRLIKSAIALVGVTAICAIYADVLVNEALIGPLQRSGESIMLQNLVPYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCH QLSLYFQVVLFAGFIISFPFIAFQIWKFVEPGLHDHEREASRFIILFISLCFFAGIAFGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FIFLPISLKFFAGFGTPLIKNNIAVQDYISFVMGTLLTTGIVFELPFISYILSKIGLLTP HHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFMRFYRKHAIVTLLVVAAIVTPSTDMVTQLVIGIPMILLYEISIWISSYVNKKQNALKT HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]