| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is folE [H]
Identifier: 119356804
GI number: 119356804
Start: 1118466
End: 1119125
Strand: Reverse
Name: folE [H]
Synonym: Cpha266_0976
Alternate gene names: 119356804
Gene position: 1119125-1118466 (Counterclockwise)
Preceding gene: 119356805
Following gene: 119356784
Centisome position: 35.71
GC content: 48.33
Gene sequence:
>660_bases ATGCCGTCAGATATCTCGGTCAGTAAAACTCCGTCATCCTTAAATTCCGGAGGATTTTGTGAAGATGATGAGTGCCTCAT GGATGGTGATACGGCCAGTCCGGAAGAGATAAGCAATCTTTCAGGAGCGGTTTCGATGCTCCTTCAGGGGATCGGCGAGA ATCCTGATCGTGAAGGGTTGCTCAAAACCCCCGAACGTGTCGCTCGATCAATGCGTTTCCTTACACGCGGCTACAGACAG AATCCCGAAGAACTCCTTAAAAAAGCAGTATTCACAGAATCGTACGATGAAATGGTACTGGTCCGGGATATCGACATCTT TTCGATGTGCGAACACCATCTTCTTCCGTTTTTCGGTAAAGCGCATGTCGCTTACATCCCTGACGGTAAAATTGTAGGCC TTTCAAAAATCGGCAGGGTCGTCGAAGTCTTTGCAAGGAGACTTCAGGTACAGGAACGCCTCACCCAGCAGATTCGCGAT GCCATTCAGGATGTTCTCAACCCTAAAGGCGTTGCTGTTGTCATTGAAGCAAAACACCTCTGCATGGTCATGCGAGGGGT AGAAAAACTGAATTCGGTTACAACCACCTCTGCGATGTCCGGTGAATTTATCTCTTCACCATCCACTCGAAGCGAGTTTT TACGTCTTATCGGTGCCTGA
Upstream 100 bases:
>100_bases CTTGCTGTCGTCATATGGGATATTCTTGACCTTCGATTACAACAATTCAACAACAGAGAGATAACTCTCTATGAAGTAAA AATCTATGAAACAGGAAAAA
Downstream 100 bases:
>100_bases AATGGCGCATGTTCTGCTGCGGCATCTTATTCTGGCCGCAGCAGCCAGACATATCCGTAACTACTTTTCAAGCCACCCGG AAAGTATCTCCTGGCCGGCC
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MPSDISVSKTPSSLNSGGFCEDDECLMDGDTASPEEISNLSGAVSMLLQGIGENPDREGLLKTPERVARSMRFLTRGYRQ NPEELLKKAVFTESYDEMVLVRDIDIFSMCEHHLLPFFGKAHVAYIPDGKIVGLSKIGRVVEVFARRLQVQERLTQQIRD AIQDVLNPKGVAVVIEAKHLCMVMRGVEKLNSVTTTSAMSGEFISSPSTRSEFLRLIGA
Sequences:
>Translated_219_residues MPSDISVSKTPSSLNSGGFCEDDECLMDGDTASPEEISNLSGAVSMLLQGIGENPDREGLLKTPERVARSMRFLTRGYRQ NPEELLKKAVFTESYDEMVLVRDIDIFSMCEHHLLPFFGKAHVAYIPDGKIVGLSKIGRVVEVFARRLQVQERLTQQIRD AIQDVLNPKGVAVVIEAKHLCMVMRGVEKLNSVTTTSAMSGEFISSPSTRSEFLRLIGA >Mature_218_residues PSDISVSKTPSSLNSGGFCEDDECLMDGDTASPEEISNLSGAVSMLLQGIGENPDREGLLKTPERVARSMRFLTRGYRQN PEELLKKAVFTESYDEMVLVRDIDIFSMCEHHLLPFFGKAHVAYIPDGKIVGLSKIGRVVEVFARRLQVQERLTQQIRDA IQDVLNPKGVAVVIEAKHLCMVMRGVEKLNSVTTTSAMSGEFISSPSTRSEFLRLIGA
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=181, Percent_Identity=57.4585635359116, Blast_Score=234, Evalue=6e-62, Organism=Homo sapiens, GI4503949, Length=181, Percent_Identity=57.4585635359116, Blast_Score=234, Evalue=6e-62, Organism=Homo sapiens, GI66932970, Length=154, Percent_Identity=52.5974025974026, Blast_Score=184, Evalue=4e-47, Organism=Homo sapiens, GI66932972, Length=141, Percent_Identity=56.0283687943262, Blast_Score=183, Evalue=9e-47, Organism=Escherichia coli, GI1788476, Length=194, Percent_Identity=42.2680412371134, Blast_Score=129, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17560486, Length=201, Percent_Identity=53.7313432835821, Blast_Score=233, Evalue=6e-62, Organism=Saccharomyces cerevisiae, GI6321706, Length=183, Percent_Identity=55.7377049180328, Blast_Score=219, Evalue=2e-58, Organism=Drosophila melanogaster, GI24656782, Length=183, Percent_Identity=56.2841530054645, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI24656791, Length=183, Percent_Identity=56.2841530054645, Blast_Score=218, Evalue=2e-57, Organism=Drosophila melanogaster, GI24656796, Length=183, Percent_Identity=56.2841530054645, Blast_Score=218, Evalue=2e-57,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 24193; Mature: 24062
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSDISVSKTPSSLNSGGFCEDDECLMDGDTASPEEISNLSGAVSMLLQGIGENPDREGL CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC LKTPERVARSMRFLTRGYRQNPEELLKKAVFTESYDEMVLVRDIDIFSMCEHHLLPFFGK CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCHHCC AHVAYIPDGKIVGLSKIGRVVEVFARRLQVQERLTQQIRDAIQDVLNPKGVAVVIEAKHL CEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH CMVMRGVEKLNSVTTTSAMSGEFISSPSTRSEFLRLIGA HHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCC >Mature Secondary Structure PSDISVSKTPSSLNSGGFCEDDECLMDGDTASPEEISNLSGAVSMLLQGIGENPDREGL CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC LKTPERVARSMRFLTRGYRQNPEELLKKAVFTESYDEMVLVRDIDIFSMCEHHLLPFFGK CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCHHCC AHVAYIPDGKIVGLSKIGRVVEVFARRLQVQERLTQQIRDAIQDVLNPKGVAVVIEAKHL CEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH CMVMRGVEKLNSVTTTSAMSGEFISSPSTRSEFLRLIGA HHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA