Click here to switch to the map view.

The map label for this gene is amy [H]

Identifier: 119356779

GI number: 119356779

Start: 1092483

End: 1094450

Strand: Direct

Name: amy [H]

Synonym: Cpha266_0951

Alternate gene names: 119356779

Gene position: 1092483-1094450 (Clockwise)

Preceding gene: 119356778

Following gene: 119356780

Centisome position: 34.86

GC content: 51.02

Gene sequence:

>1968_bases
ATGGCTTCGCATTCACCAGACACTATCACGTCTTTTGTCGAGCGACGATTGAGTGATATCGATTTTAAGGCGCTTACTGA
AAACAGATCGTTTTATCCCTCTCCTGCTTCCTGGTCGGATGAGGTGCTCTATTTTCTTTTTCTTGACCGTTTTTCCGACG
GGCGTGAGTCTGGCGGTTTTGCTGACATGGAGGGTAATCCTGTTGTTGCTGAGGCGGGAAAGCGCATGACTCCGCTGTTT
AACCTGCAGAGTGACAGTTCAACTGCTGATCGGGATAGTTGGTTCGAAGCCGGTAAGCACTGGTGCGGCGGAACTATTGC
GGGTATGAAGGAGAAACTCGGGTATCTGCAGCGGCTCGGGATAACGGCTATCTGGGTCAGTCCCGTGTTCAGGCAGGTAA
CGGGCAGCAATGATTATCATGGTTACGGGATACAGAATTTTCTTGATGTTGATCCACATTTCGGAACGAGAGAGGAGCTG
AGGGATTTTGTAAAGGCTGCGCATGATGCAGGGATTCGGGTGATTCTTGATATTATTATCAATCATGCGGGCGATGTGTT
TGCATACGAGGGTAATTACCGGTATTTCTATGCTGACGGGCAACAGTGGCCGGTGAACGGGTACCGTCGTTTCAGCGGGG
AGACCGGCACTATTCCTTTTGACGGGGCTTCCGGTTCTGTCGGGATTGATGCATGGCCTGATGGTGCGGTGTGGCCTGAG
GAGCTGCAGTCCCCTCTGACCTGGACCTGTCATGGAGAGATACGGGGTTGGGATTCGTTTCCTGAGTTTCTTGATGGTGA
TTTTTGTACGCTCAAGGATATTCATCTTGGTGATGCGCTCAAGGATCCTGAGGCGAGAGGGGATATCGAGAGGCGAATCA
GGGAGTTCAAGGTTTCACCGGCTCTTCGCACTCTTGGTGATGTGTATCGGTTCTGGATTGCGTTTGCCGATATCGATGGT
TATCGTCTTGATACCGTTAAGCACATGGAGCCGGGAGCTGTCCGGTATTTTGCCAGAACAATTCATGAATATGCCGAGTC
TCTGGGCAAGGAGAACTTTACGATTATCGGTGAAATAACGGGGGGCCGGGCTTATGCGGCAACGATTCTCGATACGACCG
GTCTTGATGCCGCCCTGGGCATCGATGATATTCCCGACAAACTTGAGTTTCTTGTGAAGGGTTGGCGGAGTCCCGGTAAT
CCTGAAACGCTCGATCAGGAGGGGTATTTTGATCTGTTTCGCAACAGTATTCTCGATAACAGGCAGAGCCATCAGTGGTA
CGCAAAGCATATTGTCACGATGCTCGATGATCATGACCAGGTTGGGGTTCGTCATAAATTCAGGTTTGCGGGGGATGATG
AGCGAAGTGCCGGCCTCCTTCCCGCTGCGCTTGGTCTGAACCTTGCTTCCGCAGGCGTTCCGTGTATCTATTACGGAACG
GAACAGGCTTTTAATGGTTGCGACAATCGTCAGGATGATGATTCTTACAGCGATGTTTTTTTACGGGAGTGCATGTTCGG
TGGTCCGTTCGGTTCTTTTCAGAGCACGGGAAAGCATTTTTTCAATGAGGATCATGAGGTGTACCGTTTTGTACAGGGAC
TTCTGGGAGTCCGTCGTGAACATATTGAGCTGCGTCGGGGCCGGCAATTTCTCAGGCAGGTGTCGGAAACCGGAAGGGAG
GGTGAGTTTTACTATCCTCAACCGGTAAATGGTCAACTGCACTGGGTGATTGCCTGGTCACGGATTTTTGCCGGATCTGA
ATCTCTTTGTGCTATTAATACCGATACTGAGCGTGATCTTGAGCTGTGGGTTGTGGTGGACTGTATTATTCATCCGCCGG
GTTCCTTTATGAGCTGTCTTTTTTCGAGCGATTCGCACGAGTGTCAGGATCGTGTTCCCGTTGCGCCGGTTCATGGATCG
GCGATCCGTATCAGGGTGCCTGCAGCGGGGTTTGTTGTGTACCGGTAA

Upstream 100 bases:

>100_bases
TACGTATCTTTTTTTGAAAGGGTACAGCACTGTTTTATGAGCGGTGCTTATGTCGGTACCTGAATCAATCCTCTGTCAAC
CATCCTAACTTTGTTGCATC

Downstream 100 bases:

>100_bases
GGGTGATATATTAATGAACAGGCGGGTTCTCTGTTTTTTGAATCCGCCTGTTTTTTTCTGGTTGCCTGTGATGGTTGTTG
GTGATGTGACCAAACGTGAA

Product: alpha amylase, catalytic region

Products: NA

Alternate protein names: 1,4-alpha-D-glucan glucanohydrolase [H]

Number of amino acids: Translated: 655; Mature: 654

Protein sequence:

>655_residues
MASHSPDTITSFVERRLSDIDFKALTENRSFYPSPASWSDEVLYFLFLDRFSDGRESGGFADMEGNPVVAEAGKRMTPLF
NLQSDSSTADRDSWFEAGKHWCGGTIAGMKEKLGYLQRLGITAIWVSPVFRQVTGSNDYHGYGIQNFLDVDPHFGTREEL
RDFVKAAHDAGIRVILDIIINHAGDVFAYEGNYRYFYADGQQWPVNGYRRFSGETGTIPFDGASGSVGIDAWPDGAVWPE
ELQSPLTWTCHGEIRGWDSFPEFLDGDFCTLKDIHLGDALKDPEARGDIERRIREFKVSPALRTLGDVYRFWIAFADIDG
YRLDTVKHMEPGAVRYFARTIHEYAESLGKENFTIIGEITGGRAYAATILDTTGLDAALGIDDIPDKLEFLVKGWRSPGN
PETLDQEGYFDLFRNSILDNRQSHQWYAKHIVTMLDDHDQVGVRHKFRFAGDDERSAGLLPAALGLNLASAGVPCIYYGT
EQAFNGCDNRQDDDSYSDVFLRECMFGGPFGSFQSTGKHFFNEDHEVYRFVQGLLGVRREHIELRRGRQFLRQVSETGRE
GEFYYPQPVNGQLHWVIAWSRIFAGSESLCAINTDTERDLELWVVVDCIIHPPGSFMSCLFSSDSHECQDRVPVAPVHGS
AIRIRVPAAGFVVYR

Sequences:

>Translated_655_residues
MASHSPDTITSFVERRLSDIDFKALTENRSFYPSPASWSDEVLYFLFLDRFSDGRESGGFADMEGNPVVAEAGKRMTPLF
NLQSDSSTADRDSWFEAGKHWCGGTIAGMKEKLGYLQRLGITAIWVSPVFRQVTGSNDYHGYGIQNFLDVDPHFGTREEL
RDFVKAAHDAGIRVILDIIINHAGDVFAYEGNYRYFYADGQQWPVNGYRRFSGETGTIPFDGASGSVGIDAWPDGAVWPE
ELQSPLTWTCHGEIRGWDSFPEFLDGDFCTLKDIHLGDALKDPEARGDIERRIREFKVSPALRTLGDVYRFWIAFADIDG
YRLDTVKHMEPGAVRYFARTIHEYAESLGKENFTIIGEITGGRAYAATILDTTGLDAALGIDDIPDKLEFLVKGWRSPGN
PETLDQEGYFDLFRNSILDNRQSHQWYAKHIVTMLDDHDQVGVRHKFRFAGDDERSAGLLPAALGLNLASAGVPCIYYGT
EQAFNGCDNRQDDDSYSDVFLRECMFGGPFGSFQSTGKHFFNEDHEVYRFVQGLLGVRREHIELRRGRQFLRQVSETGRE
GEFYYPQPVNGQLHWVIAWSRIFAGSESLCAINTDTERDLELWVVVDCIIHPPGSFMSCLFSSDSHECQDRVPVAPVHGS
AIRIRVPAAGFVVYR
>Mature_654_residues
ASHSPDTITSFVERRLSDIDFKALTENRSFYPSPASWSDEVLYFLFLDRFSDGRESGGFADMEGNPVVAEAGKRMTPLFN
LQSDSSTADRDSWFEAGKHWCGGTIAGMKEKLGYLQRLGITAIWVSPVFRQVTGSNDYHGYGIQNFLDVDPHFGTREELR
DFVKAAHDAGIRVILDIIINHAGDVFAYEGNYRYFYADGQQWPVNGYRRFSGETGTIPFDGASGSVGIDAWPDGAVWPEE
LQSPLTWTCHGEIRGWDSFPEFLDGDFCTLKDIHLGDALKDPEARGDIERRIREFKVSPALRTLGDVYRFWIAFADIDGY
RLDTVKHMEPGAVRYFARTIHEYAESLGKENFTIIGEITGGRAYAATILDTTGLDAALGIDDIPDKLEFLVKGWRSPGNP
ETLDQEGYFDLFRNSILDNRQSHQWYAKHIVTMLDDHDQVGVRHKFRFAGDDERSAGLLPAALGLNLASAGVPCIYYGTE
QAFNGCDNRQDDDSYSDVFLRECMFGGPFGSFQSTGKHFFNEDHEVYRFVQGLLGVRREHIELRRGRQFLRQVSETGREG
EFYYPQPVNGQLHWVIAWSRIFAGSESLCAINTDTERDLELWVVVDCIIHPPGSFMSCLFSSDSHECQDRVPVAPVHGSA
IRIRVPAAGFVVYR

Specific function: Since Only Maltooligosaccharides Up To A Chain Length Of 6 Glucose Units Are Actively Transported Through The Cytoplasmic Membrane VIa The Membrane-Bound Complex Of Three Proteins, Malf, Malg, And Malk, Longer Maltooligosaccharides Must First Be Degraded

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=83, Percent_Identity=36.144578313253, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1789995, Length=217, Percent_Identity=27.6497695852535, Blast_Score=83, Evalue=6e-17,
Organism=Escherichia coli, GI1790687, Length=121, Percent_Identity=34.7107438016529, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786604, Length=151, Percent_Identity=28.476821192053, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322245, Length=82, Percent_Identity=39.0243902439024, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24586587, Length=82, Percent_Identity=43.9024390243902, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24586591, Length=82, Percent_Identity=40.2439024390244, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24586599, Length=82, Percent_Identity=36.5853658536585, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24586597, Length=82, Percent_Identity=39.0243902439024, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24586593, Length=82, Percent_Identity=40.2439024390244, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24586589, Length=114, Percent_Identity=34.2105263157895, Blast_Score=66, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR005323 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF03714 PUD [H]

EC number: =3.2.1.1 [H]

Molecular weight: Translated: 73837; Mature: 73706

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASHSPDTITSFVERRLSDIDFKALTENRSFYPSPASWSDEVLYFLFLDRFSDGRESGGF
CCCCCCHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCCHHHEEEHHHHHHCCCCCCCCC
ADMEGNPVVAEAGKRMTPLFNLQSDSSTADRDSWFEAGKHWCGGTIAGMKEKLGYLQRLG
CCCCCCEEHCCCCCCCCCEEEECCCCCCCCHHHHHHHCCHHCCCCHHHHHHHHHHHHHCC
ITAIWVSPVFRQVTGSNDYHGYGIQNFLDVDPHFGTREELRDFVKAAHDAGIRVILDIII
CCEEHHHHHHHHHCCCCCCCCCCCCHHEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
NHAGDVFAYEGNYRYFYADGQQWPVNGYRRFSGETGTIPFDGASGSVGIDAWPDGAVWPE
HCCCCEEEEECCEEEEEECCCCCCCCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCCHH
ELQSPLTWTCHGEIRGWDSFPEFLDGDFCTLKDIHLGDALKDPEARGDIERRIREFKVSP
HHCCCCEEEEECCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCH
ALRTLGDVYRFWIAFADIDGYRLDTVKHMEPGAVRYFARTIHEYAESLGKENFTIIGEIT
HHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
GGRAYAATILDTTGLDAALGIDDIPDKLEFLVKGWRSPGNPETLDQEGYFDLFRNSILDN
CCCEEEEEEEECCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC
RQSHQWYAKHIVTMLDDHDQVGVRHKFRFAGDDERSAGLLPAALGLNLASAGVPCIYYGT
CCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCHHHCCCCEEEECC
EQAFNGCDNRQDDDSYSDVFLRECMFGGPFGSFQSTGKHFFNEDHEVYRFVQGLLGVRRE
HHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
HIELRRGRQFLRQVSETGREGEFYYPQPVNGQLHWVIAWSRIFAGSESLCAINTDTERDL
HHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEEEEHHHCCCCCEEEECCCCCCCE
ELWVVVDCIIHPPGSFMSCLFSSDSHECQDRVPVAPVHGSAIRIRVPAAGFVVYR
EEEEEEEEEECCCHHHHHHHHCCCCCHHHHCCCEEECCCCEEEEEECCCCEEEEC
>Mature Secondary Structure 
ASHSPDTITSFVERRLSDIDFKALTENRSFYPSPASWSDEVLYFLFLDRFSDGRESGGF
CCCCCHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCCHHHEEEHHHHHHCCCCCCCCC
ADMEGNPVVAEAGKRMTPLFNLQSDSSTADRDSWFEAGKHWCGGTIAGMKEKLGYLQRLG
CCCCCCEEHCCCCCCCCCEEEECCCCCCCCHHHHHHHCCHHCCCCHHHHHHHHHHHHHCC
ITAIWVSPVFRQVTGSNDYHGYGIQNFLDVDPHFGTREELRDFVKAAHDAGIRVILDIII
CCEEHHHHHHHHHCCCCCCCCCCCCHHEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
NHAGDVFAYEGNYRYFYADGQQWPVNGYRRFSGETGTIPFDGASGSVGIDAWPDGAVWPE
HCCCCEEEEECCEEEEEECCCCCCCCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCCHH
ELQSPLTWTCHGEIRGWDSFPEFLDGDFCTLKDIHLGDALKDPEARGDIERRIREFKVSP
HHCCCCEEEEECCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCH
ALRTLGDVYRFWIAFADIDGYRLDTVKHMEPGAVRYFARTIHEYAESLGKENFTIIGEIT
HHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
GGRAYAATILDTTGLDAALGIDDIPDKLEFLVKGWRSPGNPETLDQEGYFDLFRNSILDN
CCCEEEEEEEECCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC
RQSHQWYAKHIVTMLDDHDQVGVRHKFRFAGDDERSAGLLPAALGLNLASAGVPCIYYGT
CCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCHHHCCCCEEEECC
EQAFNGCDNRQDDDSYSDVFLRECMFGGPFGSFQSTGKHFFNEDHEVYRFVQGLLGVRRE
HHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
HIELRRGRQFLRQVSETGREGEFYYPQPVNGQLHWVIAWSRIFAGSESLCAINTDTERDL
HHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEEEEHHHCCCCCEEEECCCCCCCE
ELWVVVDCIIHPPGSFMSCLFSSDSHECQDRVPVAPVHGSAIRIRVPAAGFVVYR
EEEEEEEEEECCCHHHHHHHHCCCCCHHHHCCCEEECCCCEEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8424949; 8485150 [H]