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The map label for this gene is yloA [H]

Identifier: 119356770

GI number: 119356770

Start: 1083694

End: 1085319

Strand: Reverse

Name: yloA [H]

Synonym: Cpha266_0942

Alternate gene names: 119356770

Gene position: 1085319-1083694 (Counterclockwise)

Preceding gene: 119356783

Following gene: 119356769

Centisome position: 34.63

GC content: 47.85

Gene sequence:

>1626_bases
ATGCATCGCAATTACTTCACACTCTATCATGCCGCAATGGAGCTTGATGAAAAGCTCAGCGGAGGCTTTATCTTTGAACT
ATGCTCCCGCAACAAAAACGAACTGACCATAAGCTTCATCACCAGTACAGGAACCCATCTGCAGCTCATTGTCATCACCG
ATTCCCGAACCGTTACCCTCTTCACCAGTGAAGGCTTGAACAGGAAAAAACGAAATACCGCAAAGCTTTTCAGAAACATT
GAGGACAAGGCGATTACCGGCGTTGAGATGTCGCCGTTTGACAGGGAAATAAAAATCCATCTCGAATCCGGCACAACACT
GACTCTTCAGCTCTTTACGGCTAAAACCAACGTGCTCCTTCTGCAAAGTGATTCGATCATTACAGATGCATTCAAGCACA
AGGCGCAACTTGCAGGAAGTGCATACCAATGCGAAAACGGTTCAAAAAGCATCATACACCAGCTCGAAACCCTTTCGCGT
GACTATGCCGGGTTTTTGGCCGCTTCACTTAACCAGCTCCCGGGTTTTGACCGCGCCCTGCATCGCGAACTGATCAAAAG
AGCTGGAGATCCAGACAAACCCGAAGCCATGTTCAGGGCCTTTCAGGAACTCTTCTACGAACTTCTTGATCCAAGACCTC
ATCTGAAACTCACCAATCAGGGAACTCCCGCGTTCAGCATTCTGCATGATTCGTCCGATCCCTCTCCTCAATCGCGCAAC
ACTGACTCCATACTTGAGGGTTTAAACCTCTACAGCAAGGCAATACAGCAGTTCACGCATCTTGACAAGAGCCAGACCGG
GTTCAGAAAAAAACTTTCACAGAAACTGAAAAAAACAGAAAAAGAGCTCCAGGCATTCAGCCCTGAACAGACCTCCGCCC
TTGCCGCGCGATATGAACTTTTCGGGCATCTTCTTATGGCTGCGCTCTACCAGGAGAGAACTTCACCGGACCATATTGAC
GTAAACAATCTTTTTGAAAAGGATGAACCTCTGGCGCACATTCCACTCAACCCGGCGCTCACTCTGCAGGAAAACGCACA
AGACTACTTTACAAAAGCATCGAAAAGCAGAGAAAAAACAGAAACAATGCGGCAACGACAGCATAAACTCGAAGCAGAAC
GAAAGATTCTTGCTGAAACGCAATTGGCCCTTGACAAGCTCGCCGACAGGGAGAGCATAGAGAACTTCATTACAGAGCAC
AGAGACCTCTTCGGCAAACCCGGACAGCGAAAAAATAAAGAGGCTGTTTCAGCACCCTTCAAATCAATCGTCATCAAAGA
AGGAACAACCCTTTTTGTCGGAAAAAATGCCAAAAACAATGAATTGCTCACCTTTTCCCATGCCAGACCCGGCGATATCT
GGCTTCACACCCGGGGAGCCTCAGGATCGCACTGCGTTCTCAGAGGAGTTGCGCTCCACGACAAGGCAACCATTGAAAAA
GCAGCGACAATTGCCGCATGGTATTCATCGGCAAAACACGCGGAACTGGTACCGGTTATCTATACCTTAAAGAAATATGT
TCGACGGGGGAAAAAACTTCCGGTTGGACAGGTTATTGCAGAACGCGAAACCATCCTGTTCGTCAAACCACAGAGAGAAC
AGCGATCAACCCTGAAAACAGAATGA

Upstream 100 bases:

>100_bases
CAGCGGAACGCAAAAGAGAGCGTCAAATCGAGCAAGAAATCAATAGATATTCCCCTTAAGATAGACAAAAAGATCGGGCT
CACGCAACCATTCAGCAAGC

Downstream 100 bases:

>100_bases
ATACATGGAAAACTATAAACTTGTTCTACCCGAACACCTGAACCACTTTGGCTTTCTTTTCGGCGGAAACCTGCTCAAAT
GGATTGATGAGGTAAGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MHRNYFTLYHAAMELDEKLSGGFIFELCSRNKNELTISFITSTGTHLQLIVITDSRTVTLFTSEGLNRKKRNTAKLFRNI
EDKAITGVEMSPFDREIKIHLESGTTLTLQLFTAKTNVLLLQSDSIITDAFKHKAQLAGSAYQCENGSKSIIHQLETLSR
DYAGFLAASLNQLPGFDRALHRELIKRAGDPDKPEAMFRAFQELFYELLDPRPHLKLTNQGTPAFSILHDSSDPSPQSRN
TDSILEGLNLYSKAIQQFTHLDKSQTGFRKKLSQKLKKTEKELQAFSPEQTSALAARYELFGHLLMAALYQERTSPDHID
VNNLFEKDEPLAHIPLNPALTLQENAQDYFTKASKSREKTETMRQRQHKLEAERKILAETQLALDKLADRESIENFITEH
RDLFGKPGQRKNKEAVSAPFKSIVIKEGTTLFVGKNAKNNELLTFSHARPGDIWLHTRGASGSHCVLRGVALHDKATIEK
AATIAAWYSSAKHAELVPVIYTLKKYVRRGKKLPVGQVIAERETILFVKPQREQRSTLKTE

Sequences:

>Translated_541_residues
MHRNYFTLYHAAMELDEKLSGGFIFELCSRNKNELTISFITSTGTHLQLIVITDSRTVTLFTSEGLNRKKRNTAKLFRNI
EDKAITGVEMSPFDREIKIHLESGTTLTLQLFTAKTNVLLLQSDSIITDAFKHKAQLAGSAYQCENGSKSIIHQLETLSR
DYAGFLAASLNQLPGFDRALHRELIKRAGDPDKPEAMFRAFQELFYELLDPRPHLKLTNQGTPAFSILHDSSDPSPQSRN
TDSILEGLNLYSKAIQQFTHLDKSQTGFRKKLSQKLKKTEKELQAFSPEQTSALAARYELFGHLLMAALYQERTSPDHID
VNNLFEKDEPLAHIPLNPALTLQENAQDYFTKASKSREKTETMRQRQHKLEAERKILAETQLALDKLADRESIENFITEH
RDLFGKPGQRKNKEAVSAPFKSIVIKEGTTLFVGKNAKNNELLTFSHARPGDIWLHTRGASGSHCVLRGVALHDKATIEK
AATIAAWYSSAKHAELVPVIYTLKKYVRRGKKLPVGQVIAERETILFVKPQREQRSTLKTE
>Mature_541_residues
MHRNYFTLYHAAMELDEKLSGGFIFELCSRNKNELTISFITSTGTHLQLIVITDSRTVTLFTSEGLNRKKRNTAKLFRNI
EDKAITGVEMSPFDREIKIHLESGTTLTLQLFTAKTNVLLLQSDSIITDAFKHKAQLAGSAYQCENGSKSIIHQLETLSR
DYAGFLAASLNQLPGFDRALHRELIKRAGDPDKPEAMFRAFQELFYELLDPRPHLKLTNQGTPAFSILHDSSDPSPQSRN
TDSILEGLNLYSKAIQQFTHLDKSQTGFRKKLSQKLKKTEKELQAFSPEQTSALAARYELFGHLLMAALYQERTSPDHID
VNNLFEKDEPLAHIPLNPALTLQENAQDYFTKASKSREKTETMRQRQHKLEAERKILAETQLALDKLADRESIENFITEH
RDLFGKPGQRKNKEAVSAPFKSIVIKEGTTLFVGKNAKNNELLTFSHARPGDIWLHTRGASGSHCVLRGVALHDKATIEK
AATIAAWYSSAKHAELVPVIYTLKKYVRRGKKLPVGQVIAERETILFVKPQREQRSTLKTE

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 61242; Mature: 61242

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRNYFTLYHAAMELDEKLSGGFIFELCSRNKNELTISFITSTGTHLQLIVITDSRTVTL
CCCCEEEHHHHHHHHHHHHCCCEEEHHHCCCCCEEEEEEEECCCCEEEEEEEECCCEEEE
FTSEGLNRKKRNTAKLFRNIEDKAITGVEMSPFDREIKIHLESGTTLTLQLFTAKTNVLL
EECCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCEEE
LQSDSIITDAFKHKAQLAGSAYQCENGSKSIIHQLETLSRDYAGFLAASLNQLPGFDRAL
EECCCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
HRELIKRAGDPDKPEAMFRAFQELFYELLDPRPHLKLTNQGTPAFSILHDSSDPSPQSRN
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCC
TDSILEGLNLYSKAIQQFTHLDKSQTGFRKKLSQKLKKTEKELQAFSPEQTSALAARYEL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FGHLLMAALYQERTSPDHIDVNNLFEKDEPLAHIPLNPALTLQENAQDYFTKASKSREKT
HHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEECCCCCCEEECCCHHHHHHHHHHHHHHH
ETMRQRQHKLEAERKILAETQLALDKLADRESIENFITEHRDLFGKPGQRKNKEAVSAPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCH
KSIVIKEGTTLFVGKNAKNNELLTFSHARPGDIWLHTRGASGSHCVLRGVALHDKATIEK
HHEEEECCCEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCCEEEEEEEECCHHHHHH
AATIAAWYSSAKHAELVPVIYTLKKYVRRGKKLPVGQVIAERETILFVKPQREQRSTLKT
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEECCCHHHHHCCCC
E
C
>Mature Secondary Structure
MHRNYFTLYHAAMELDEKLSGGFIFELCSRNKNELTISFITSTGTHLQLIVITDSRTVTL
CCCCEEEHHHHHHHHHHHHCCCEEEHHHCCCCCEEEEEEEECCCCEEEEEEEECCCEEEE
FTSEGLNRKKRNTAKLFRNIEDKAITGVEMSPFDREIKIHLESGTTLTLQLFTAKTNVLL
EECCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCEEE
LQSDSIITDAFKHKAQLAGSAYQCENGSKSIIHQLETLSRDYAGFLAASLNQLPGFDRAL
EECCCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
HRELIKRAGDPDKPEAMFRAFQELFYELLDPRPHLKLTNQGTPAFSILHDSSDPSPQSRN
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCC
TDSILEGLNLYSKAIQQFTHLDKSQTGFRKKLSQKLKKTEKELQAFSPEQTSALAARYEL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FGHLLMAALYQERTSPDHIDVNNLFEKDEPLAHIPLNPALTLQENAQDYFTKASKSREKT
HHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEECCCCCCEEECCCHHHHHHHHHHHHHHH
ETMRQRQHKLEAERKILAETQLALDKLADRESIENFITEHRDLFGKPGQRKNKEAVSAPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCH
KSIVIKEGTTLFVGKNAKNNELLTFSHARPGDIWLHTRGASGSHCVLRGVALHDKATIEK
HHEEEECCCEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCCEEEEEEEECCHHHHHH
AATIAAWYSSAKHAELVPVIYTLKKYVRRGKKLPVGQVIAERETILFVKPQREQRSTLKT
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEECCCHHHHHCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]