| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356769
Identifier: 119356769
GI number: 119356769
Start: 1083330
End: 1083689
Strand: Reverse
Name: 119356769
Synonym: Cpha266_0941
Alternate gene names: NA
Gene position: 1083689-1083330 (Counterclockwise)
Preceding gene: 119356770
Following gene: 119356758
Centisome position: 34.58
GC content: 42.5
Gene sequence:
>360_bases ATGGAAAACTATAAACTTGTTCTACCCGAACACCTGAACCACTTTGGCTTTCTTTTCGGCGGAAACCTGCTCAAATGGAT TGATGAGGTAAGCTACATTGCAGTAACTCTCGACTACCCCGGATGTAACTTTGTCACGATCGGCCTTGACAAGGTCGAAT TTAAACAAAGCATTCGCGGAGGCACCATACTCTGTTTTGTCACTGAAAAAAGCAAAATCGGCAACACATCGATAGAGTAT ACGGTGAACGTGCACAAAGATCGTATCGAAACACGCGAAAAGGTAATTGTTTTCAGTACAAAAATAACATTCGTCTGTCT TGACAAGAACGGAGTAAAAAAGCCCCTCGACAAAAGCTGA
Upstream 100 bases:
>100_bases AAAAAACTTCCGGTTGGACAGGTTATTGCAGAACGCGAAACCATCCTGTTCGTCAAACCACAGAGAGAACAGCGATCAAC CCTGAAAACAGAATGAATAC
Downstream 100 bases:
>100_bases TAACGCCCCCCGGCCTCAAGACCCGGTATCGCTATTTTGAAGAATTGAAAACCGCGCCGGTCAGCCGGTAGAGCAGAAAC AGACCGATAAAGCCGATGGT
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Long-Chain Acyl-CoA Thioester Hydrolase Protein; Acyl-CoA Hydrolase; Long-Chain Acyl-CoA Thioester Hydrolase Family Protein; Thioesterase Superfamilyl Protein; Acyl-CoA Hydrolase Family Protein
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MENYKLVLPEHLNHFGFLFGGNLLKWIDEVSYIAVTLDYPGCNFVTIGLDKVEFKQSIRGGTILCFVTEKSKIGNTSIEY TVNVHKDRIETREKVIVFSTKITFVCLDKNGVKKPLDKS
Sequences:
>Translated_119_residues MENYKLVLPEHLNHFGFLFGGNLLKWIDEVSYIAVTLDYPGCNFVTIGLDKVEFKQSIRGGTILCFVTEKSKIGNTSIEY TVNVHKDRIETREKVIVFSTKITFVCLDKNGVKKPLDKS >Mature_119_residues MENYKLVLPEHLNHFGFLFGGNLLKWIDEVSYIAVTLDYPGCNFVTIGLDKVEFKQSIRGGTILCFVTEKSKIGNTSIEY TVNVHKDRIETREKVIVFSTKITFVCLDKNGVKKPLDKS
Specific function: Unknown
COG id: COG1607
COG function: function code I; Acyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13546; Mature: 13546
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENYKLVLPEHLNHFGFLFGGNLLKWIDEVSYIAVTLDYPGCNFVTIGLDKVEFKQSIRG CCCEEEECCCCCCCEEEEECCHHHHHHCCCEEEEEEEECCCCCEEEEECCHHHHHHHCCC GTILCFVTEKSKIGNTSIEYTVNVHKDRIETREKVIVFSTKITFVCLDKNGVKKPLDKS CEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MENYKLVLPEHLNHFGFLFGGNLLKWIDEVSYIAVTLDYPGCNFVTIGLDKVEFKQSIRG CCCEEEECCCCCCCEEEEECCHHHHHHCCCEEEEEEEECCCCCEEEEECCHHHHHHHCCC GTILCFVTEKSKIGNTSIEYTVNVHKDRIETREKVIVFSTKITFVCLDKNGVKKPLDKS CEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA