| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356768
Identifier: 119356768
GI number: 119356768
Start: 1081970
End: 1083298
Strand: Direct
Name: 119356768
Synonym: Cpha266_0940
Alternate gene names: NA
Gene position: 1081970-1083298 (Clockwise)
Preceding gene: 119356767
Following gene: 119356771
Centisome position: 34.52
GC content: 47.48
Gene sequence:
>1329_bases ATGAAAATCATTGATCGATATCTTCTGAAGTCTCATATCGGGCCTTTCATTTTTGCTTTTATTACGATTCTCTTTGTTCT GATTCTTCAGTTTTTCGCTGTTTTTTCGGAGCGATTGTTGGGAAAGGGGATCGGCTGGATGACCCTGCTTGAGCTGGTTG TGGTGCAGTCGGCATGGATGGTGAGCTTTACCATTCCGATGGCTGTGCTGATTGCTGTTGTCATGGCATTTGGTGCCATG ACCAATGCTTCGGAAATAACGATTTTCAGGGCTTCCGGCATCTCTCTCTACAGGCTTATGGCGCCGGTTCTTCTTGCGGC GACGCTGCTTTCGCTTGTGGCGGAACGGTTTAACAACGTGGTGCTTCCGGAAGCTAACTATAAGGCTAAATCCCTGATGG CCGATATCGTTAAATCAAAGCCGGTTTTTGGTTTAACCGAAAATGCCTTTTCAACACTGATTGATGGATACTCCATTCTG GTGCGCCAGACTGATCCGGAAACAGGTGCAATAAGGGGAATTGTCATCTATGATTTTACACGGCCGGATTTTCGCACTAT TGTTACTGCTGAAAGCGGGGGGGTTAATTTTTCATCCGATTATCACTATCTCATCATTACGCTTGAAAATGGCGAGATCC ATGAGATTCAGCAGCCGCAGCACAAAGAGTATCGTAAAATGAGTTTTAAAAAGCACCGTTTTGTGTTTGAGTCATCCGGG TTCGGTTTTAACCGATCGGTTGAGTCGGCTATTCGCTCTGATGACCGGGATCTCTCTTCCGGGGGACTCCTTTCAATAAG CAGGGATTTCAGGAGCAGGATTGCTCTTGCAAAACAACGCATCAATGAACCTCTTGTTCATCTTGGCAGCGTGTTTGGCA GCGTGCCTGGCGTTTCTTCATCCAAAGAGCGCTCTATGCAGTCAAACATAACAAAAGAGGGAAGAACATTTGCTGCCGGA TATGTGGACAAGCTTATTCTTTCGCTCGATCAGGAGCTTCACCGCATGGAGTCTGATACCGGCATGTACAACAAGTATAT GGCCGAATACCACAAGAAGTATGCGCTTGCGTTTGCCTGTATTGTTTTTGCCCTTGTCGGCGCTCCGCTTGGCGTGCTTG CCAGACGCGGAGGGTTCGGTATAGGGGCAGGGTTGTCACTGGTCTTTTTTGTTCTTTACTGGATACTTATGATCAGTGGT GAAAAACTTGCCGAACGGGGTCTTCTTGACCCCGGCCTTTCCATGTGGCTCGGCAATATAACCATCGGCTTTATCGGTCT GTTTCTGCTCTACCGGCTGACCGGCGCGGTTTTCAATTCTTCAAAATAG
Upstream 100 bases:
>100_bases TTCGGCTGAGTTTTTTGCTGTATATTGAGTTCAGTATTCCGGAAAAAACCGTTTTCTCCGCAACCGTTGCAGCAATTGTG CTCTTTATGGTTTCCTCTCT
Downstream 100 bases:
>100_bases CGATACCGGGTCTTGAGGCCGGGGGGCGTTATCAGCTTTTGTCGAGGGGCTTTTTTACTCCGTTCTTGTCAAGACAGACG AATGTTATTTTTGTACTGAA
Product: permease YjgP/YjgQ family protein
Products: NA
Alternate protein names: Permease; Permease Yjgp/Yjgq Family Protein; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Permease; YjgP/YjgQ Permease; YjgP/YjgQ Family Protein
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MKIIDRYLLKSHIGPFIFAFITILFVLILQFFAVFSERLLGKGIGWMTLLELVVVQSAWMVSFTIPMAVLIAVVMAFGAM TNASEITIFRASGISLYRLMAPVLLAATLLSLVAERFNNVVLPEANYKAKSLMADIVKSKPVFGLTENAFSTLIDGYSIL VRQTDPETGAIRGIVIYDFTRPDFRTIVTAESGGVNFSSDYHYLIITLENGEIHEIQQPQHKEYRKMSFKKHRFVFESSG FGFNRSVESAIRSDDRDLSSGGLLSISRDFRSRIALAKQRINEPLVHLGSVFGSVPGVSSSKERSMQSNITKEGRTFAAG YVDKLILSLDQELHRMESDTGMYNKYMAEYHKKYALAFACIVFALVGAPLGVLARRGGFGIGAGLSLVFFVLYWILMISG EKLAERGLLDPGLSMWLGNITIGFIGLFLLYRLTGAVFNSSK
Sequences:
>Translated_442_residues MKIIDRYLLKSHIGPFIFAFITILFVLILQFFAVFSERLLGKGIGWMTLLELVVVQSAWMVSFTIPMAVLIAVVMAFGAM TNASEITIFRASGISLYRLMAPVLLAATLLSLVAERFNNVVLPEANYKAKSLMADIVKSKPVFGLTENAFSTLIDGYSIL VRQTDPETGAIRGIVIYDFTRPDFRTIVTAESGGVNFSSDYHYLIITLENGEIHEIQQPQHKEYRKMSFKKHRFVFESSG FGFNRSVESAIRSDDRDLSSGGLLSISRDFRSRIALAKQRINEPLVHLGSVFGSVPGVSSSKERSMQSNITKEGRTFAAG YVDKLILSLDQELHRMESDTGMYNKYMAEYHKKYALAFACIVFALVGAPLGVLARRGGFGIGAGLSLVFFVLYWILMISG EKLAERGLLDPGLSMWLGNITIGFIGLFLLYRLTGAVFNSSK >Mature_442_residues MKIIDRYLLKSHIGPFIFAFITILFVLILQFFAVFSERLLGKGIGWMTLLELVVVQSAWMVSFTIPMAVLIAVVMAFGAM TNASEITIFRASGISLYRLMAPVLLAATLLSLVAERFNNVVLPEANYKAKSLMADIVKSKPVFGLTENAFSTLIDGYSIL VRQTDPETGAIRGIVIYDFTRPDFRTIVTAESGGVNFSSDYHYLIITLENGEIHEIQQPQHKEYRKMSFKKHRFVFESSG FGFNRSVESAIRSDDRDLSSGGLLSISRDFRSRIALAKQRINEPLVHLGSVFGSVPGVSSSKERSMQSNITKEGRTFAAG YVDKLILSLDQELHRMESDTGMYNKYMAEYHKKYALAFACIVFALVGAPLGVLARRGGFGIGAGLSLVFFVLYWILMISG EKLAERGLLDPGLSMWLGNITIGFIGLFLLYRLTGAVFNSSK
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49101; Mature: 49101
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIDRYLLKSHIGPFIFAFITILFVLILQFFAVFSERLLGKGIGWMTLLELVVVQSAWM CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VSFTIPMAVLIAVVMAFGAMTNASEITIFRASGISLYRLMAPVLLAATLLSLVAERFNNV HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCE VLPEANYKAKSLMADIVKSKPVFGLTENAFSTLIDGYSILVRQTDPETGAIRGIVIYDFT ECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHEEEEECCCCCCCEEEEEEEECC RPDFRTIVTAESGGVNFSSDYHYLIITLENGEIHEIQQPQHKEYRKMSFKKHRFVFESSG CCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEEECCC FGFNRSVESAIRSDDRDLSSGGLLSISRDFRSRIALAKQRINEPLVHLGSVFGSVPGVSS CCCCHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCC SKERSMQSNITKEGRTFAAGYVDKLILSLDQELHRMESDTGMYNKYMAEYHKKYALAFAC HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IVFALVGAPLGVLARRGGFGIGAGLSLVFFVLYWILMISGEKLAERGLLDPGLSMWLGNI HHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHH TIGFIGLFLLYRLTGAVFNSSK HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKIIDRYLLKSHIGPFIFAFITILFVLILQFFAVFSERLLGKGIGWMTLLELVVVQSAWM CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VSFTIPMAVLIAVVMAFGAMTNASEITIFRASGISLYRLMAPVLLAATLLSLVAERFNNV HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCE VLPEANYKAKSLMADIVKSKPVFGLTENAFSTLIDGYSILVRQTDPETGAIRGIVIYDFT ECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHEEEEECCCCCCCEEEEEEEECC RPDFRTIVTAESGGVNFSSDYHYLIITLENGEIHEIQQPQHKEYRKMSFKKHRFVFESSG CCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEEECCC FGFNRSVESAIRSDDRDLSSGGLLSISRDFRSRIALAKQRINEPLVHLGSVFGSVPGVSS CCCCHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCC SKERSMQSNITKEGRTFAAGYVDKLILSLDQELHRMESDTGMYNKYMAEYHKKYALAFAC HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IVFALVGAPLGVLARRGGFGIGAGLSLVFFVLYWILMISGEKLAERGLLDPGLSMWLGNI HHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHH TIGFIGLFLLYRLTGAVFNSSK HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA