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The map label for this gene is 119356766

Identifier: 119356766

GI number: 119356766

Start: 1078602

End: 1079069

Strand: Direct

Name: 119356766

Synonym: Cpha266_0938

Alternate gene names: NA

Gene position: 1078602-1079069 (Clockwise)

Preceding gene: 119356765

Following gene: 119356767

Centisome position: 34.42

GC content: 43.38

Gene sequence:

>468_bases
ATGGCGGTTGATAATATTCATCAAAAAATTGCAGCCATAGCCTCAAAGGAGCCATCTGGCTGGTTGAAAGATGCTCAGTG
GAGAACTGAAAACAGGGCATGGTTAAAACATTCACAAGCCATAGCTCTACGGATTTTACGAACATTGCGAGCAAAAAATG
TTTCGCAAAAGGAGCTTGCTGAAAAAATCGGAGTTTCACCCCAACAGGTTAATAAAATTGTTAAAGGGCGGGAAAACCTG
ACCCTTGAAACTATCTCAAAGCTTGAGGGTGCGCTTGATATTGTGCTTCTGATGCTTCCTCCATCAAGTGAGAGTACCAC
TCATAACCTTTCTTCAACCCTTGTGCCCGAACCAAAAAAATCCTCCGCTAAAAAGTCTCGAGCAATAACCGTAAAGGTGT
TACAACAGGGGATTGTTGCGGGAAAAGTCCATGAAACCGGAAGTGGTTATGGCAAAGAGGTCACTTGA

Upstream 100 bases:

>100_bases
AAGAGCTCTGCAAGCTTGATTTGGTAAAGAATTTTTTATTTGATCAGGGTCTTTTGGATAAAGAAGATTTTGAATACCTG
AAAACATAGGAACAGAAATC

Downstream 100 bases:

>100_bases
ATAAGGTAACCAGCAAAGAAGCATAAAGCAGCCTTGAAAGAGTGCATTTCATCAGTGAATCAACATCGAAATAATGCCCG
AAAAAATCTCATCCATAAAG

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MAVDNIHQKIAAIASKEPSGWLKDAQWRTENRAWLKHSQAIALRILRTLRAKNVSQKELAEKIGVSPQQVNKIVKGRENL
TLETISKLEGALDIVLLMLPPSSESTTHNLSSTLVPEPKKSSAKKSRAITVKVLQQGIVAGKVHETGSGYGKEVT

Sequences:

>Translated_155_residues
MAVDNIHQKIAAIASKEPSGWLKDAQWRTENRAWLKHSQAIALRILRTLRAKNVSQKELAEKIGVSPQQVNKIVKGRENL
TLETISKLEGALDIVLLMLPPSSESTTHNLSSTLVPEPKKSSAKKSRAITVKVLQQGIVAGKVHETGSGYGKEVT
>Mature_154_residues
AVDNIHQKIAAIASKEPSGWLKDAQWRTENRAWLKHSQAIALRILRTLRAKNVSQKELAEKIGVSPQQVNKIVKGRENLT
LETISKLEGALDIVLLMLPPSSESTTHNLSSTLVPEPKKSSAKKSRAITVKVLQQGIVAGKVHETGSGYGKEVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16952; Mature: 16821

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVDNIHQKIAAIASKEPSGWLKDAQWRTENRAWLKHSQAIALRILRTLRAKNVSQKELA
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
EKIGVSPQQVNKIVKGRENLTLETISKLEGALDIVLLMLPPSSESTTHNLSSTLVPEPKK
HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHCCCCCCCC
SSAKKSRAITVKVLQQGIVAGKVHETGSGYGKEVT
HHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVDNIHQKIAAIASKEPSGWLKDAQWRTENRAWLKHSQAIALRILRTLRAKNVSQKELA
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
EKIGVSPQQVNKIVKGRENLTLETISKLEGALDIVLLMLPPSSESTTHNLSSTLVPEPKK
HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHCCCCCCCC
SSAKKSRAITVKVLQQGIVAGKVHETGSGYGKEVT
HHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA