| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is pkn1 [H]
Identifier: 119356730
GI number: 119356730
Start: 1031117
End: 1032877
Strand: Direct
Name: pkn1 [H]
Synonym: Cpha266_0902
Alternate gene names: 119356730
Gene position: 1031117-1032877 (Clockwise)
Preceding gene: 119356729
Following gene: 119356731
Centisome position: 32.9
GC content: 48.32
Gene sequence:
>1761_bases ATGACTGTTGAAGAAATTATCAGGATGCTCGATAATCCGTCAACGCTGGGCGATGCTTTGATTGAAGCGGCGAAGTTGCC ATTCAAAGGTGACGACAGGATACGGTTCCAGCAAAAACGACAGCGATTCATTGATGGATTGAGTGATCATGAACGGCCTC AATGGGTCGGGGAGATGAAAACTTTTTTGTCATTGTATGAATCGACCGGTAGCGTTGATAGCGCAGTCACACCACTCAGT GCGTATCGCAATGATTTCAGTACCGATATATTTATAAGCTACGCCCGCGAAGACATGAAACGGGTTGAGCCAATTGTCAG GGAGCTGGAAAAACACGGCTGGAGTGTTTTCTGGGATCCTGAGATTCCACCGGGGGAGACCTGGCGGGGTTATATCAAGA AAAAGCTGGATGAATCACGTTGCGTGCTCGTTGCCTGGTCTCGTCTTTCAGTCACTTCCGAATGGGTTATCGCTGAAGCT GATGAAGCAAAAAAACGAGGCATTCTGGTTCCTGTGCTACTCGATGCTGTTGAGCCTCCATTCGGGTTCAGCCATATTCA TGCGGCAAATCTTTCCTGCTGGAAAAATGATAGTAATAGTCGAGCATTCAAGGAACTCGTGAATGCGGTCACCCTGAAAA TTTCTTCGTCATCACCATCTTTCATGAACTCAATATTGGGTGAGACGTCAGTTCCTATCCCTAAGACAGCACCAGTTATT GTACCATCAACCTCAATGCTGGAAGCACTTCGTGTAATGGTTCAAAATTGGATTTCAGTAGTTGCGAGTATCAGAACATG GCAACCAAAAAGCCGGCAAACAGCAATTGCTATTGTGCTGGTCATGGTGTTTATTTTTGCGGTTTTATCGTATCGTTATT TGCGTGTAACGGGTCCTTCGTCACCATCTGTTCCGGAAACTGTTCAGCCTGTGAACGCATCGCCAGCAAGGCCAGGAAAC TTTGTTCTGATACGCGGAGGTGAGTTTACAATGGGGAGCCCGGCGAATGAATCTGGTCACGAGAGTGACGAGACTCAGCA TCAGGTCAAAGTGAGTGATTTTTACCTGTGCAAATATGCGGTTACCCTTGCCGAGTTTAAAAAATTCATTGAAGATTCAG GCTATCAGACTGATGCTGAAAAAGATGGCGGCAGTTATAGTTGGGATGGAATAAGTTGGGTGAAGAATGCTGGAGTTGAC TGGCGATATGGGGTTTCAGGCAGTGTACGACCTCAAAGTGAAGAGAACCATCCTGTGTTACATGTGAGCTGGAATGACGC TGTGGCCTATTGCAAGTGGATATCGAAAAAAACAGGAGATGCATTTCGTTTGCCAACGGAAGCTGAGTGGGAATATGCGT GTCGAGCAGGAACAACCACACCGTTCCATACCGGCGATAACCTGACAACCGGTCAGGCGAACTATAACGGAAACTATCCG TATACCAACAATCAGAAAGGAGTGTATCGGGAGAACACGGTTAAGGTTGATGAGTTTGCTCCGAACGCGTGGGGGTTATA CCATATGCATGGCAATGTGTGGGAGTGGTGTGGCGACAGGTATGGGGATAAATATTATGATGAATGCAAAGCCGAAGGTG TTGTTGAAAATCCGGTTGGCCCGGAAACCGGTTCGCTCCGTGTGCTTCGTGGAGGTGGCTGGAGCTTCAATGCGAGGAGC TGTCGGTCGGCTTTTCGCATCGACGTCGCCCCCGACTACCGCAGCAACTACGCCGGCTTCCGCCTGGCCTTCGTCCCGTA G
Upstream 100 bases:
>100_bases GGATCGTGCTGGTGTTTTTGTGTGCGATATCTCGATCAGGCCGTGAAAGTCGTATCTTGAAAAAAACTTCAGAGTAACGT CAGGGAAAAAGATAAAGAGT
Downstream 100 bases:
>100_bases TCAGTTGGTAGCTCATGCCGACCTTTACTTTGAGCAAAGAGAGAGCTGACAAAAAAGTTGAGAACGGCAGCGAGGGACGA GCGCCGTGCACAACTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 586; Mature: 585
Protein sequence:
>586_residues MTVEEIIRMLDNPSTLGDALIEAAKLPFKGDDRIRFQQKRQRFIDGLSDHERPQWVGEMKTFLSLYESTGSVDSAVTPLS AYRNDFSTDIFISYAREDMKRVEPIVRELEKHGWSVFWDPEIPPGETWRGYIKKKLDESRCVLVAWSRLSVTSEWVIAEA DEAKKRGILVPVLLDAVEPPFGFSHIHAANLSCWKNDSNSRAFKELVNAVTLKISSSSPSFMNSILGETSVPIPKTAPVI VPSTSMLEALRVMVQNWISVVASIRTWQPKSRQTAIAIVLVMVFIFAVLSYRYLRVTGPSSPSVPETVQPVNASPARPGN FVLIRGGEFTMGSPANESGHESDETQHQVKVSDFYLCKYAVTLAEFKKFIEDSGYQTDAEKDGGSYSWDGISWVKNAGVD WRYGVSGSVRPQSEENHPVLHVSWNDAVAYCKWISKKTGDAFRLPTEAEWEYACRAGTTTPFHTGDNLTTGQANYNGNYP YTNNQKGVYRENTVKVDEFAPNAWGLYHMHGNVWEWCGDRYGDKYYDECKAEGVVENPVGPETGSLRVLRGGGWSFNARS CRSAFRIDVAPDYRSNYAGFRLAFVP
Sequences:
>Translated_586_residues MTVEEIIRMLDNPSTLGDALIEAAKLPFKGDDRIRFQQKRQRFIDGLSDHERPQWVGEMKTFLSLYESTGSVDSAVTPLS AYRNDFSTDIFISYAREDMKRVEPIVRELEKHGWSVFWDPEIPPGETWRGYIKKKLDESRCVLVAWSRLSVTSEWVIAEA DEAKKRGILVPVLLDAVEPPFGFSHIHAANLSCWKNDSNSRAFKELVNAVTLKISSSSPSFMNSILGETSVPIPKTAPVI VPSTSMLEALRVMVQNWISVVASIRTWQPKSRQTAIAIVLVMVFIFAVLSYRYLRVTGPSSPSVPETVQPVNASPARPGN FVLIRGGEFTMGSPANESGHESDETQHQVKVSDFYLCKYAVTLAEFKKFIEDSGYQTDAEKDGGSYSWDGISWVKNAGVD WRYGVSGSVRPQSEENHPVLHVSWNDAVAYCKWISKKTGDAFRLPTEAEWEYACRAGTTTPFHTGDNLTTGQANYNGNYP YTNNQKGVYRENTVKVDEFAPNAWGLYHMHGNVWEWCGDRYGDKYYDECKAEGVVENPVGPETGSLRVLRGGGWSFNARS CRSAFRIDVAPDYRSNYAGFRLAFVP >Mature_585_residues TVEEIIRMLDNPSTLGDALIEAAKLPFKGDDRIRFQQKRQRFIDGLSDHERPQWVGEMKTFLSLYESTGSVDSAVTPLSA YRNDFSTDIFISYAREDMKRVEPIVRELEKHGWSVFWDPEIPPGETWRGYIKKKLDESRCVLVAWSRLSVTSEWVIAEAD EAKKRGILVPVLLDAVEPPFGFSHIHAANLSCWKNDSNSRAFKELVNAVTLKISSSSPSFMNSILGETSVPIPKTAPVIV PSTSMLEALRVMVQNWISVVASIRTWQPKSRQTAIAIVLVMVFIFAVLSYRYLRVTGPSSPSVPETVQPVNASPARPGNF VLIRGGEFTMGSPANESGHESDETQHQVKVSDFYLCKYAVTLAEFKKFIEDSGYQTDAEKDGGSYSWDGISWVKNAGVDW RYGVSGSVRPQSEENHPVLHVSWNDAVAYCKWISKKTGDAFRLPTEAEWEYACRAGTTTPFHTGDNLTTGQANYNGNYPY TNNQKGVYRENTVKVDEFAPNAWGLYHMHGNVWEWCGDRYGDKYYDECKAEGVVENPVGPETGSLRVLRGGGWSFNARSC RSAFRIDVAPDYRSNYAGFRLAFVP
Specific function: Together with the serine/threonine kinase pknD, may play a role in the specific interactions with host proteins during intracellular growth [H]
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI38202250, Length=322, Percent_Identity=33.8509316770186, Blast_Score=154, Evalue=3e-37, Organism=Homo sapiens, GI257470975, Length=305, Percent_Identity=34.0983606557377, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI257470977, Length=255, Percent_Identity=34.9019607843137, Blast_Score=136, Evalue=7e-32, Organism=Homo sapiens, GI194248088, Length=292, Percent_Identity=30.4794520547945, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI194248087, Length=277, Percent_Identity=31.4079422382672, Blast_Score=103, Evalue=6e-22, Organism=Homo sapiens, GI226437577, Length=176, Percent_Identity=36.3636363636364, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI194248090, Length=157, Percent_Identity=33.1210191082803, Blast_Score=78, Evalue=3e-14, Organism=Drosophila melanogaster, GI20130397, Length=355, Percent_Identity=30.1408450704225, Blast_Score=125, Evalue=9e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016187 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR005532 [H]
Pfam domain/function: PF03781 DUF323; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 65815; Mature: 65684
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVEEIIRMLDNPSTLGDALIEAAKLPFKGDDRIRFQQKRQRFIDGLSDHERPQWVGEMK CCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH TFLSLYESTGSVDSAVTPLSAYRNDFSTDIFISYAREDMKRVEPIVRELEKHGWSVFWDP HHHHHHHHCCCCHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC EIPPGETWRGYIKKKLDESRCVLVAWSRLSVTSEWVIAEADEAKKRGILVPVLLDAVEPP CCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCHHHHCCEEHHHHHHHCCCC FGFSHIHAANLSCWKNDSNSRAFKELVNAVTLKISSSSPSFMNSILGETSVPIPKTAPVI CCCCCEEECCCEEECCCCCHHHHHHHHHHEEEEECCCCCHHHHHHHCCCCCCCCCCCCEE VPSTSMLEALRVMVQNWISVVASIRTWQPKSRQTAIAIVLVMVFIFAVLSYRYLRVTGPS ECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCC SPSVPETVQPVNASPARPGNFVLIRGGEFTMGSPANESGHESDETQHQVKVSDFYLCKYA CCCCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCHHHEEEEHHEEHHHHH VTLAEFKKFIEDSGYQTDAEKDGGSYSWDGISWVKNAGVDWRYGVSGSVRPQSEENHPVL HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCEE HVSWNDAVAYCKWISKKTGDAFRLPTEAEWEYACRAGTTTPFHTGDNLTTGQANYNGNYP EEECCHHHHHHHHHHCCCCCCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC YTNNQKGVYRENTVKVDEFAPNAWGLYHMHGNVWEWCGDRYGDKYYDECKAEGVVENPVG CCCCCCCCEECCCEEHHHCCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHCCCCCCCCCC PETGSLRVLRGGGWSFNARSCRSAFRIDVAPDYRSNYAGFRLAFVP CCCCCEEEEECCCCCCCHHHHCCEEEEECCCCCCCCCCCEEEEECC >Mature Secondary Structure TVEEIIRMLDNPSTLGDALIEAAKLPFKGDDRIRFQQKRQRFIDGLSDHERPQWVGEMK CHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH TFLSLYESTGSVDSAVTPLSAYRNDFSTDIFISYAREDMKRVEPIVRELEKHGWSVFWDP HHHHHHHHCCCCHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC EIPPGETWRGYIKKKLDESRCVLVAWSRLSVTSEWVIAEADEAKKRGILVPVLLDAVEPP CCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCHHHHCCEEHHHHHHHCCCC FGFSHIHAANLSCWKNDSNSRAFKELVNAVTLKISSSSPSFMNSILGETSVPIPKTAPVI CCCCCEEECCCEEECCCCCHHHHHHHHHHEEEEECCCCCHHHHHHHCCCCCCCCCCCCEE VPSTSMLEALRVMVQNWISVVASIRTWQPKSRQTAIAIVLVMVFIFAVLSYRYLRVTGPS ECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCC SPSVPETVQPVNASPARPGNFVLIRGGEFTMGSPANESGHESDETQHQVKVSDFYLCKYA CCCCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCHHHEEEEHHEEHHHHH VTLAEFKKFIEDSGYQTDAEKDGGSYSWDGISWVKNAGVDWRYGVSGSVRPQSEENHPVL HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCEE HVSWNDAVAYCKWISKKTGDAFRLPTEAEWEYACRAGTTTPFHTGDNLTTGQANYNGNYP EEECCHHHHHHHHHHCCCCCCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC YTNNQKGVYRENTVKVDEFAPNAWGLYHMHGNVWEWCGDRYGDKYYDECKAEGVVENPVG CCCCCCCCEECCCEEHHHCCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHCCCCCCCCCC PETGSLRVLRGGGWSFNARSCRSAFRIDVAPDYRSNYAGFRLAFVP CCCCCEEEEECCCCCCCHHHHCCEEEEECCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]