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The map label for this gene is 119356637

Identifier: 119356637

GI number: 119356637

Start: 918563

End: 919456

Strand: Reverse

Name: 119356637

Synonym: Cpha266_0806

Alternate gene names: NA

Gene position: 919456-918563 (Counterclockwise)

Preceding gene: 119356638

Following gene: 119356636

Centisome position: 29.34

GC content: 48.77

Gene sequence:

>894_bases
ATGTCCGACATTGTATTTTTGCTTGCTCCGATTTTTGTTTTTTTTCTCATCGGCTTCGTATTGCAGCGAGCCCGGGTTAT
CGACGCGCCCGCATCTTCGTTTCTTCTGAAACTTGTTTATACGCTGACACTTCCCGCCCTTGTCCTTTCGCTTTTCCCCT
ATGTGGTCATTTCACAAGGAATGCTTTTTCTTCCGGTTATTTCAGGGTGTATTGTACTGGGCACCCTTGCCGCAGCACTC
GCTACCGGCAAAGTACTCTCCATGCCCCCGAAATCCTATGCCGTTCTCGCTTCAGGATCAATGATCATGAACCTCAGCAT
CGTCATACCATTTGTTAAATCTTTCTATGGTGATGAAGGTCTTTCCCGTCTTGTTCTGTTTGATTTCATAAACGGTCTGG
CTGCATTTACCATTGCATACTCTATTTCCTGCCGATACGGGGCCTCCGGGCATCAGGGCATCGCAAAGCGCCTTTTAAGT
TCCCCGCCTTTATGGGCCCTTATTGCGGGCCTCCTCATGAATTTTCTCTCGCTGCGATTCAATCCCCTCTCAGCCAATAT
CCTGCATAGTATCGGAGAGCTCACAAGCCCGCTTTTGCTTCTCGCACTGGGCGCATCGATAAAACTTTCAAAAATCAACC
CTCTATATCTTGCCGCGGGCGTATTCACAAGAATGGTGCTCGGATTTGCCCTGGGACTTGGACTGGCAGAACTTTTCAGA
CTGCAGGGAATAGATCGGGCAATCGCCGTGCTCTGTGCCGCAGCTCCCGCCGGATTCAATACCCTGACGTTTGCCTCGCT
TGAAAAACTTGATGTTGATTACGCAACAACGCTTGTTACGATAACCATGATTATCGCGATGCTCATCATGCCGATTCTTC
TCACTCTGTTGTAA

Upstream 100 bases:

>100_bases
ATTGGATAGAGCGTCTGACTACGGATCAGAAGGTTAGGGGTTCGATTCCTCTCGGGTGCACAGATCTCATCATTATACGG
CTTTATCGCCTCCTCAGACA

Downstream 100 bases:

>100_bases
AAAAAAGAAAACGACATTGCTCTTTTATATTATTTTGATATATTCTCAACGCTATTGAGGAGTGGCCAAATTGGTAAGGC
ACCTGATTCTGGATCAGGCA

Product: auxin efflux carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSDIVFLLAPIFVFFLIGFVLQRARVIDAPASSFLLKLVYTLTLPALVLSLFPYVVISQGMLFLPVISGCIVLGTLAAAL
ATGKVLSMPPKSYAVLASGSMIMNLSIVIPFVKSFYGDEGLSRLVLFDFINGLAAFTIAYSISCRYGASGHQGIAKRLLS
SPPLWALIAGLLMNFLSLRFNPLSANILHSIGELTSPLLLLALGASIKLSKINPLYLAAGVFTRMVLGFALGLGLAELFR
LQGIDRAIAVLCAAAPAGFNTLTFASLEKLDVDYATTLVTITMIIAMLIMPILLTLL

Sequences:

>Translated_297_residues
MSDIVFLLAPIFVFFLIGFVLQRARVIDAPASSFLLKLVYTLTLPALVLSLFPYVVISQGMLFLPVISGCIVLGTLAAAL
ATGKVLSMPPKSYAVLASGSMIMNLSIVIPFVKSFYGDEGLSRLVLFDFINGLAAFTIAYSISCRYGASGHQGIAKRLLS
SPPLWALIAGLLMNFLSLRFNPLSANILHSIGELTSPLLLLALGASIKLSKINPLYLAAGVFTRMVLGFALGLGLAELFR
LQGIDRAIAVLCAAAPAGFNTLTFASLEKLDVDYATTLVTITMIIAMLIMPILLTLL
>Mature_296_residues
SDIVFLLAPIFVFFLIGFVLQRARVIDAPASSFLLKLVYTLTLPALVLSLFPYVVISQGMLFLPVISGCIVLGTLAAALA
TGKVLSMPPKSYAVLASGSMIMNLSIVIPFVKSFYGDEGLSRLVLFDFINGLAAFTIAYSISCRYGASGHQGIAKRLLSS
PPLWALIAGLLMNFLSLRFNPLSANILHSIGELTSPLLLLALGASIKLSKINPLYLAAGVFTRMVLGFALGLGLAELFRL
QGIDRAIAVLCAAAPAGFNTLTFASLEKLDVDYATTLVTITMIIAMLIMPILLTLL

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 31679; Mature: 31548

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIVFLLAPIFVFFLIGFVLQRARVIDAPASSFLLKLVYTLTLPALVLSLFPYVVISQG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MLFLPVISGCIVLGTLAAALATGKVLSMPPKSYAVLASGSMIMNLSIVIPFVKSFYGDEG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHH
LSRLVLFDFINGLAAFTIAYSISCRYGASGHQGIAKRLLSSPPLWALIAGLLMNFLSLRF
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
NPLSANILHSIGELTSPLLLLALGASIKLSKINPLYLAAGVFTRMVLGFALGLGLAELFR
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQGIDRAIAVLCAAAPAGFNTLTFASLEKLDVDYATTLVTITMIIAMLIMPILLTLL
HHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SDIVFLLAPIFVFFLIGFVLQRARVIDAPASSFLLKLVYTLTLPALVLSLFPYVVISQG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MLFLPVISGCIVLGTLAAALATGKVLSMPPKSYAVLASGSMIMNLSIVIPFVKSFYGDEG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHH
LSRLVLFDFINGLAAFTIAYSISCRYGASGHQGIAKRLLSSPPLWALIAGLLMNFLSLRF
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
NPLSANILHSIGELTSPLLLLALGASIKLSKINPLYLAAGVFTRMVLGFALGLGLAELFR
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQGIDRAIAVLCAAAPAGFNTLTFASLEKLDVDYATTLVTITMIIAMLIMPILLTLL
HHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]