| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is cheB1 [H]
Identifier: 119356624
GI number: 119356624
Start: 905520
End: 906104
Strand: Reverse
Name: cheB1 [H]
Synonym: Cpha266_0793
Alternate gene names: 119356624
Gene position: 906104-905520 (Counterclockwise)
Preceding gene: 119356627
Following gene: 119356618
Centisome position: 28.91
GC content: 56.07
Gene sequence:
>585_bases ATGAAAGCTGAGAGTGCAACCAGAAACTTTCCGGTCGTATGCGTGGGAGGTTCGGCTGGTGGTCTTGATGCATACATTCA GCTGCTGCAGAATCTGCCGGCTGACCTGGGGGTCGCCATCGTCATCGTCAATCACCTCAGAACCGTGGCTACCCTGTTGC ACGAAATCCTCCCGAAATACACAACGATGCCAGTTGAGTTGATCACCGACAACCTCGTCATTGAGCCCAACCACGTGTTC ATCATCCCGGAAAAGCGTGACCTGCATGTTCTTGATGGCGAATTCCGCCTTGAGCCGATCTTCAAGCCACGGGGTTGGCC CGACGTGATAACGATCTTTCTGCGTTCACTCACAAACAACTGGGACGGGAAGCTCATTGCCGTCATCGTCTCCGGCTATG ACGGCGACGGAGCGGCTGCGCTGTGCGGCATCAAGGAAGTTGGCGGCATCACCATTGCCCAGAAGCTCGACACGGCGACA CAGCCAGACATGCCCGAGAGCGCAATAGATACCGGGTGCATTGACTTCGTCCTCGCACCCGAGAGTATCGCCAGGGAAAT CGCCAGAATCGCCCGGTCAATATAG
Upstream 100 bases:
>100_bases TGTTCGACAGGTTCGGAGCAAGCGGTACTGAGCAACCCCCGTCGGCTCCAGAAACTGCCGGCTGCGCGAACCTCATGGCC TGAAAATGGAGAAATGCTCA
Downstream 100 bases:
>100_bases TGTTATGCCACGCTTGAGTTGTGCCTCAGATTTCAGCTGGTTCATCCTGAACGAAAGTTCAGGCCTGACTGGAATTGCAT CCGTCAGAACAATCTTGACA
Product: CheB methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKAESATRNFPVVCVGGSAGGLDAYIQLLQNLPADLGVAIVIVNHLRTVATLLHEILPKYTTMPVELITDNLVIEPNHVF IIPEKRDLHVLDGEFRLEPIFKPRGWPDVITIFLRSLTNNWDGKLIAVIVSGYDGDGAAALCGIKEVGGITIAQKLDTAT QPDMPESAIDTGCIDFVLAPESIAREIARIARSI
Sequences:
>Translated_194_residues MKAESATRNFPVVCVGGSAGGLDAYIQLLQNLPADLGVAIVIVNHLRTVATLLHEILPKYTTMPVELITDNLVIEPNHVF IIPEKRDLHVLDGEFRLEPIFKPRGWPDVITIFLRSLTNNWDGKLIAVIVSGYDGDGAAALCGIKEVGGITIAQKLDTAT QPDMPESAIDTGCIDFVLAPESIAREIARIARSI >Mature_194_residues MKAESATRNFPVVCVGGSAGGLDAYIQLLQNLPADLGVAIVIVNHLRTVATLLHEILPKYTTMPVELITDNLVIEPNHVF IIPEKRDLHVLDGEFRLEPIFKPRGWPDVITIFLRSLTNNWDGKLIAVIVSGYDGDGAAALCGIKEVGGITIAQKLDTAT QPDMPESAIDTGCIDFVLAPESIAREIARIARSI
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 21008; Mature: 21008
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAESATRNFPVVCVGGSAGGLDAYIQLLQNLPADLGVAIVIVNHLRTVATLLHEILPKY CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TTMPVELITDNLVIEPNHVFIIPEKRDLHVLDGEFRLEPIFKPRGWPDVITIFLRSLTNN CCCCCEEECCCEEECCCEEEEEECCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCC WDGKLIAVIVSGYDGDGAAALCGIKEVGGITIAQKLDTATQPDMPESAIDTGCIDFVLAP CCCEEEEEEEECCCCCCCEEECCHHHHCCEEEHHHHCCCCCCCCCHHHHCCCCHHEEECC ESIAREIARIARSI HHHHHHHHHHHHCC >Mature Secondary Structure MKAESATRNFPVVCVGGSAGGLDAYIQLLQNLPADLGVAIVIVNHLRTVATLLHEILPKY CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TTMPVELITDNLVIEPNHVFIIPEKRDLHVLDGEFRLEPIFKPRGWPDVITIFLRSLTNN CCCCCEEECCCEEECCCEEEEEECCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCC WDGKLIAVIVSGYDGDGAAALCGIKEVGGITIAQKLDTATQPDMPESAIDTGCIDFVLAP CCCEEEEEEEECCCCCCCEEECCHHHHCCEEEHHHHCCCCCCCCCHHHHCCCCHHEEECC ESIAREIARIARSI HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA