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The map label for this gene is tnpB [H]

Identifier: 119356612

GI number: 119356612

Start: 890924

End: 891451

Strand: Reverse

Name: tnpB [H]

Synonym: Cpha266_0780

Alternate gene names: 119356612

Gene position: 891451-890924 (Counterclockwise)

Preceding gene: 119356615

Following gene: 119356610

Centisome position: 28.45

GC content: 49.43

Gene sequence:

>528_bases
TTGATTCCTCTACACCAAGTCCACTACAAGCTTACTCTTATCGGGCCAAGCGGCACCGGCAAAAGCTATCTTGCCGGCGG
TCTCTGCCATGAAGCCCTCAATCTCGGTTATCACGAACTGTTCCGAACTATGGATGAGCTCATCCATACCATCAGGCTCA
AGGAAGTTACAACGGCGGCGGCAAGGGAGTTCAAGCGAATAATGCATGCGCGCCTGCCGGTTATTGAGGATATCATGATG
TTACCGCTTGAAAACACGGTTGCCGTCGGTCTGTTCCAGCTCGTCAACCAGCTTCATGAACAGGCATCATTCATTATTAC
GACCAATAAAAGCCCGAAAGATTGGGCGGAGATGCTTGATCGGCTGCTCTACAAATGCGAAGTCATCAAACTAACCGGTA
AAAGCTACCGGCTCGAACACCGTACAACCATCTTCGAACAACAGCAACCGGCAGAAGGAGGCGCCACACGCAGAAAAAAT
CAGCTATCGCTTCAAAAAGTCGTAGTAGATCATGGCAAAATGACGTAA

Upstream 100 bases:

>100_bases
AATGTATATAATAAATAACAAATATTGGATAGTATAGCGATATTATTGGCCAATATTTGAATTCAAATAACTGCCAGTTA
TTACTAAAACTGGAAATAAT

Downstream 100 bases:

>100_bases
TTTAAAGCCGCTGCCTGGGTGATTGCTAATTTCCGAAATTGGCTGATTTTTAATTTCCGACTACAACTGTCAACAAATGC
AGATTCGCACTCTATTCTGA

Product: IstB ATP binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MIPLHQVHYKLTLIGPSGTGKSYLAGGLCHEALNLGYHELFRTMDELIHTIRLKEVTTAAAREFKRIMHARLPVIEDIMM
LPLENTVAVGLFQLVNQLHEQASFIITTNKSPKDWAEMLDRLLYKCEVIKLTGKSYRLEHRTTIFEQQQPAEGGATRRKN
QLSLQKVVVDHGKMT

Sequences:

>Translated_175_residues
MIPLHQVHYKLTLIGPSGTGKSYLAGGLCHEALNLGYHELFRTMDELIHTIRLKEVTTAAAREFKRIMHARLPVIEDIMM
LPLENTVAVGLFQLVNQLHEQASFIITTNKSPKDWAEMLDRLLYKCEVIKLTGKSYRLEHRTTIFEQQQPAEGGATRRKN
QLSLQKVVVDHGKMT
>Mature_175_residues
MIPLHQVHYKLTLIGPSGTGKSYLAGGLCHEALNLGYHELFRTMDELIHTIRLKEVTTAAAREFKRIMHARLPVIEDIMM
LPLENTVAVGLFQLVNQLHEQASFIITTNKSPKDWAEMLDRLLYKCEVIKLTGKSYRLEHRTTIFEQQQPAEGGATRRKN
QLSLQKVVVDHGKMT

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 19962; Mature: 19962

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPLHQVHYKLTLIGPSGTGKSYLAGGLCHEALNLGYHELFRTMDELIHTIRLKEVTTAA
CCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AREFKRIMHARLPVIEDIMMLPLENTVAVGLFQLVNQLHEQASFIITTNKSPKDWAEMLD
HHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHH
RLLYKCEVIKLTGKSYRLEHRTTIFEQQQPAEGGATRRKNQLSLQKVVVDHGKMT
HHHHHHHHEEECCCCEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIPLHQVHYKLTLIGPSGTGKSYLAGGLCHEALNLGYHELFRTMDELIHTIRLKEVTTAA
CCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AREFKRIMHARLPVIEDIMMLPLENTVAVGLFQLVNQLHEQASFIITTNKSPKDWAEMLD
HHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHH
RLLYKCEVIKLTGKSYRLEHRTTIFEQQQPAEGGATRRKNQLSLQKVVVDHGKMT
HHHHHHHHEEECCCCEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7517394 [H]