| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356606
Identifier: 119356606
GI number: 119356606
Start: 881471
End: 882778
Strand: Direct
Name: 119356606
Synonym: Cpha266_0774
Alternate gene names: NA
Gene position: 881471-882778 (Clockwise)
Preceding gene: 119356604
Following gene: 119356611
Centisome position: 28.13
GC content: 50.61
Gene sequence:
>1308_bases ATGCTTCGATTTATTGATAACGATCTTCGGCGCTGGCAGGAAAGTTCACGCCGCAAACCCCTCATCCTGCGGGGTGCTCG TCAGGTCGGGAAAACCTGGTCACTCAAAGAGTTTGGAAAAAACCGGTTTGAATCTCTTGCTCTCGTCGATCTTGAGCGAA ATCAGCCCCTTCGCAAGCTCTTCGATGGCGACCTGAAGGTAACGCGCATCTGCTCTGATCTTGAAGTTATCCTTCAGCAA AAGATAACTCCGGGAAAAACGCTGCTCTTTTTTGATGAGATACAGGCCTGTCCTCGTGCCATAACAGCCCTGCGCTATTT TTATGAGGAGATGCCGGAGCTGCATGTCGTGGCCGCCGGTTCGCTCCTTGAATTTGCGCTTGAAGAGAGTTCTTTTCCTG TCGGCAGGGTGCAGTTTCTCAATCTCTACCCGCTTTGTTTTGCTGAATATCTGGAGGCAATCGGCAACGGCGCTGCGGCA ACGGCTGTTCTGGGCAATCCGGCTGAAATATCACCCGCAGTGCATGAGCTGCTGCGCGAGGAGCTGAAACGTTATTTCTT TATTGGGGGAATGCCTGCGGCTGTCAAGGCATATCTTGAAAATCAATCATTGCGTGATGCCTTTGAGGTACAACAAGAGG TTGCCGAGTCATACAGGATGGACTTTGCCAAATATACTCCGATGGTTGACCGCTTCTGTCTCGATTCGGTCTTTACTTCC CTGTCGCAGCATATCGGAAAACAGATCAAATATGCACGCCTTGGTGAAGGGTACAGCAATCCGACACTGAAAAAAGCATT CGATGCCTTGTGCTTTGCTCAGGTAGCCCGAAGGATACCCTCGGTCGATCCATCAGGGCTTCCTTTAGGGGCAACTGCTT CAGCCAAATCATTCAAGGCGCTCATGCTCGATATTGGATTAATGCGCTACCTTTCCGGTATGCCGAACGATATTGAGTAT GTAAAAAGTGATCTGCTTGCCATCTACCGGGGAGCCATGGCAGAACAGTTTATCGGGCAAGAGATGCTGGTTTCTCAAAA GGGTGGCCTGTATTACTGGGATCGGCAGGCTAAAAGCAGTTCGGCTGAAGTTGATTATCTGGCTGTTCTGGACGGCAAGA TTCATCCGGTTGAGGTGAAAAGCGGGGCCGCCGGTAGCTTGAGGAGCCTGCATCTCTTTCTTGCTTCGTATCCGGAGTGT GGCAAAGCACTGGTCTTTTCCGATCGCCCATATGCAGATCTTCCAGAGCAAAAAATCACATTCCTGCCGCTTTACAGCGC CTTTGCTGCCACAACGTCAGGGCAATGA
Upstream 100 bases:
>100_bases TTTACTTATAGGTCAAAATGCCTTGTGTTTTTATATCATAAAGCCATAAATTGCCTTGTAAAATCAAATAGACACTGTTT TGCCACCTTAATTATGGTAC
Downstream 100 bases:
>100_bases GGGCGGCCTCCTGGCGTTACGTTCAGAAAACCAGCTCCGCCCAGAATGGCCCTTGCTGCTCGGGACGTGCCCCCGTCTAT GAGCGTCCCGCTATCTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: AAA+ Superfamily ATPase; ATPase-Like Protein; AAA Family ATPase; AAA ATPase; NERD Domain Protein
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MLRFIDNDLRRWQESSRRKPLILRGARQVGKTWSLKEFGKNRFESLALVDLERNQPLRKLFDGDLKVTRICSDLEVILQQ KITPGKTLLFFDEIQACPRAITALRYFYEEMPELHVVAAGSLLEFALEESSFPVGRVQFLNLYPLCFAEYLEAIGNGAAA TAVLGNPAEISPAVHELLREELKRYFFIGGMPAAVKAYLENQSLRDAFEVQQEVAESYRMDFAKYTPMVDRFCLDSVFTS LSQHIGKQIKYARLGEGYSNPTLKKAFDALCFAQVARRIPSVDPSGLPLGATASAKSFKALMLDIGLMRYLSGMPNDIEY VKSDLLAIYRGAMAEQFIGQEMLVSQKGGLYYWDRQAKSSSAEVDYLAVLDGKIHPVEVKSGAAGSLRSLHLFLASYPEC GKALVFSDRPYADLPEQKITFLPLYSAFAATTSGQ
Sequences:
>Translated_435_residues MLRFIDNDLRRWQESSRRKPLILRGARQVGKTWSLKEFGKNRFESLALVDLERNQPLRKLFDGDLKVTRICSDLEVILQQ KITPGKTLLFFDEIQACPRAITALRYFYEEMPELHVVAAGSLLEFALEESSFPVGRVQFLNLYPLCFAEYLEAIGNGAAA TAVLGNPAEISPAVHELLREELKRYFFIGGMPAAVKAYLENQSLRDAFEVQQEVAESYRMDFAKYTPMVDRFCLDSVFTS LSQHIGKQIKYARLGEGYSNPTLKKAFDALCFAQVARRIPSVDPSGLPLGATASAKSFKALMLDIGLMRYLSGMPNDIEY VKSDLLAIYRGAMAEQFIGQEMLVSQKGGLYYWDRQAKSSSAEVDYLAVLDGKIHPVEVKSGAAGSLRSLHLFLASYPEC GKALVFSDRPYADLPEQKITFLPLYSAFAATTSGQ >Mature_435_residues MLRFIDNDLRRWQESSRRKPLILRGARQVGKTWSLKEFGKNRFESLALVDLERNQPLRKLFDGDLKVTRICSDLEVILQQ KITPGKTLLFFDEIQACPRAITALRYFYEEMPELHVVAAGSLLEFALEESSFPVGRVQFLNLYPLCFAEYLEAIGNGAAA TAVLGNPAEISPAVHELLREELKRYFFIGGMPAAVKAYLENQSLRDAFEVQQEVAESYRMDFAKYTPMVDRFCLDSVFTS LSQHIGKQIKYARLGEGYSNPTLKKAFDALCFAQVARRIPSVDPSGLPLGATASAKSFKALMLDIGLMRYLSGMPNDIEY VKSDLLAIYRGAMAEQFIGQEMLVSQKGGLYYWDRQAKSSSAEVDYLAVLDGKIHPVEVKSGAAGSLRSLHLFLASYPEC GKALVFSDRPYADLPEQKITFLPLYSAFAATTSGQ
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48708; Mature: 48708
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRFIDNDLRRWQESSRRKPLILRGARQVGKTWSLKEFGKNRFESLALVDLERNQPLRKL CCCCHHHHHHHHHHHCCCCCEEECCHHHHCCCCCHHHHHHHHHHHEEEEEECCCCCHHHH FDGDLKVTRICSDLEVILQQKITPGKTLLFFDEIQACPRAITALRYFYEEMPELHVVAAG HCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEHH SLLEFALEESSFPVGRVQFLNLYPLCFAEYLEAIGNGAAATAVLGNPAEISPAVHELLRE HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH ELKRYFFIGGMPAAVKAYLENQSLRDAFEVQQEVAESYRMDFAKYTPMVDRFCLDSVFTS HHHHHEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSQHIGKQIKYARLGEGYSNPTLKKAFDALCFAQVARRIPSVDPSGLPLGATASAKSFKA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH LMLDIGLMRYLSGMPNDIEYVKSDLLAIYRGAMAEQFIGQEMLVSQKGGLYYWDRQAKSS HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEECCCCCCC SAEVDYLAVLDGKIHPVEVKSGAAGSLRSLHLFLASYPECGKALVFSDRPYADLPEQKIT CCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEE FLPLYSAFAATTSGQ EEEHHHHHHHCCCCC >Mature Secondary Structure MLRFIDNDLRRWQESSRRKPLILRGARQVGKTWSLKEFGKNRFESLALVDLERNQPLRKL CCCCHHHHHHHHHHHCCCCCEEECCHHHHCCCCCHHHHHHHHHHHEEEEEECCCCCHHHH FDGDLKVTRICSDLEVILQQKITPGKTLLFFDEIQACPRAITALRYFYEEMPELHVVAAG HCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEHH SLLEFALEESSFPVGRVQFLNLYPLCFAEYLEAIGNGAAATAVLGNPAEISPAVHELLRE HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH ELKRYFFIGGMPAAVKAYLENQSLRDAFEVQQEVAESYRMDFAKYTPMVDRFCLDSVFTS HHHHHEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSQHIGKQIKYARLGEGYSNPTLKKAFDALCFAQVARRIPSVDPSGLPLGATASAKSFKA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH LMLDIGLMRYLSGMPNDIEYVKSDLLAIYRGAMAEQFIGQEMLVSQKGGLYYWDRQAKSS HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEECCCCCCC SAEVDYLAVLDGKIHPVEVKSGAAGSLRSLHLFLASYPECGKALVFSDRPYADLPEQKIT CCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEE FLPLYSAFAATTSGQ EEEHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA