| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356603
Identifier: 119356603
GI number: 119356603
Start: 878375
End: 880312
Strand: Direct
Name: 119356603
Synonym: Cpha266_0771
Alternate gene names: NA
Gene position: 878375-880312 (Clockwise)
Preceding gene: 119356602
Following gene: 119356604
Centisome position: 28.03
GC content: 41.18
Gene sequence:
>1938_bases ATGAAGAACAGCCAAGCTAGGACTAGAAGTGCTTTGATCGTATTGGGGCTTATGCCTCCCTTAATACGGAATACATTGTT TGATGACTCGGATTTTATTGAGGAATGTGGAGTTAGTGCTGAAGTTGTCTTGATTTTAGGAGATTCTATTGTTTCGTTTC ATCGTTCCGAACTTTTTAATGCAATACGAGCGATTTTTCGTGGTGCATACATAAAGAAAATTGCTGATACGACAGGACGG AAATGGAAACTTAGGAGCACTAATGAGGTTGGTGAATTGCCCCGATTTATACTTTCTCGAGGTTTACAGAACTTAAATTT GCCTGACTTTTTTGCACTTTCTCCGGATATTTCTTTTCGTCTAAAAGCTCTTGATAAGGTAGCATCAGAGTTCAATTTTC CATACGATCCTCAGCAGAGATGGAAAAATATTTTGAAAGAACGTGCTATCAAAGATGATGAGTTTGACGCATTTCAAAGT GATTTACGAGATACTCCGATCTATGTTATGAGATCAATACGAAGTAAAATCGTTAGCAGACGCATGAGTTTGCCAACATA TGTTCCTCCATCTCGCCGATATTTTCAAAGATTGGTGGGAGCTTACGATGGTAGTGTATCCATCAATAATTATGCTACCG GGGTAAGTGCTGAATTCTTTAAGCAATTGTCTGCCTGGCATCCGTATGACGGTTTTTTGTTAAGCTTACTTCTTTCTTCT CATTCTGCGTTAACTACTGAAATCGGTGTCGAATGTTTGGGAAGTGATGATCTGGTTCGGGCTTTTCTATTCCTTGAAAA TCATGGCGATAGAATTTCGCAACTTGGTGCCATTGAAATCGGATTTCGCATCCTTCCTGAAAGACCAGAGATTGAACATT TAATTATTAATCTCATAAAGCAAATTCGAGATGATGATGTGAATGGTGATGTAAGTGGGTTCAAAATTCTTTCTGCCTTG TTTGTTCTTGTAGATGGGGAATTATCCAAAATACGGCTTTTTTCAGAAGAGCCTCCTTTTTACAGGCGGTTAGCATCTTT AGCTCAAGCTGCGCTTATCTGCCGTCAGCTTTTCGATTCAAATATTGACATACATGCGTTTTATGAGTGGGCGGTAAACA ATCGTGGAGAGCAGCATTATTTTCAGTCGCTAGTTGATATGCGTATGGAGCCGCGCTGGAATCCTGATTTTGGGATGGCA GCACAAATTAAGGCTGATTTTTATGGTCGCATATTGATTGCATCACAACGATATCGCATGAATATCAAAGATGGTGAGCT ATATGAACTTGTTTTTGGTAATGAGTCAGGAAGCCTTGACCCTCTTTATGAGTTTCCGGCGCCCTTCATATCTGGGCCGT TAGAGGGTGGTGAAAATAGTCTGAACATTTTACCTACTGAACTCACTGAAACGATTGAATCGCAACTCAATGCAGACGAA ATAGGGCCAAAGTCTTTTATTACCCTTGTGAATTCGGCGCTGATCTACCGCGTACATTCAGACCAAGCCGAATTAGCAGC AAAAGCTCTCAAGCTTGGCAACTATCGAATGACAAACATAGAGAGTAAGTCTCAGCTTTTGGGAATATTAAATGGTTTAG CCACTGTAGTAGCTTCAACAAGAAGTAAAACATTAGCAAATGCATTGCGAATTATTGTGCGTAGATATAGGCGAGATGCT CAGTATCCCTTATCAATCGACGAGGCAATTAAGTTTTGTCTTGTCGCCGGGGCATGCCATGACTCTCTAAAGGAATGGCG GGAATTTGTAGGGGATTGGCTAACAGAACTTGCTTTTTGCCCATTAGCAGATAAAGAGGGAGAAGTGTTCCATTCACGAT TGATGTGTATCTGTCACGCTGTTCCAGAACTATGGGTATCCTGTGGGAGAGCTGATGCTGCTCTGCAGGCCCATAACGCA AGTCGGCAGTATGTCTGA
Upstream 100 bases:
>100_bases TCAAAGAACAATATCCTGACCTATATACTTGGGTTGTGGATTGCCAAAAGCAGCTGATTGCGGAGATGGCTGAAAGGGAT CAGATTGAAGGGGATGCAAT
Downstream 100 bases:
>100_bases AAGATGTAACATTCCGATCTGGATTGAATGGATGTAACGCCCGCCTTTCCTTCCTCAAAATTTGTTGTATAACAATGATT ATGTAAAGTTGTGATTATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 645; Mature: 645
Protein sequence:
>645_residues MKNSQARTRSALIVLGLMPPLIRNTLFDDSDFIEECGVSAEVVLILGDSIVSFHRSELFNAIRAIFRGAYIKKIADTTGR KWKLRSTNEVGELPRFILSRGLQNLNLPDFFALSPDISFRLKALDKVASEFNFPYDPQQRWKNILKERAIKDDEFDAFQS DLRDTPIYVMRSIRSKIVSRRMSLPTYVPPSRRYFQRLVGAYDGSVSINNYATGVSAEFFKQLSAWHPYDGFLLSLLLSS HSALTTEIGVECLGSDDLVRAFLFLENHGDRISQLGAIEIGFRILPERPEIEHLIINLIKQIRDDDVNGDVSGFKILSAL FVLVDGELSKIRLFSEEPPFYRRLASLAQAALICRQLFDSNIDIHAFYEWAVNNRGEQHYFQSLVDMRMEPRWNPDFGMA AQIKADFYGRILIASQRYRMNIKDGELYELVFGNESGSLDPLYEFPAPFISGPLEGGENSLNILPTELTETIESQLNADE IGPKSFITLVNSALIYRVHSDQAELAAKALKLGNYRMTNIESKSQLLGILNGLATVVASTRSKTLANALRIIVRRYRRDA QYPLSIDEAIKFCLVAGACHDSLKEWREFVGDWLTELAFCPLADKEGEVFHSRLMCICHAVPELWVSCGRADAALQAHNA SRQYV
Sequences:
>Translated_645_residues MKNSQARTRSALIVLGLMPPLIRNTLFDDSDFIEECGVSAEVVLILGDSIVSFHRSELFNAIRAIFRGAYIKKIADTTGR KWKLRSTNEVGELPRFILSRGLQNLNLPDFFALSPDISFRLKALDKVASEFNFPYDPQQRWKNILKERAIKDDEFDAFQS DLRDTPIYVMRSIRSKIVSRRMSLPTYVPPSRRYFQRLVGAYDGSVSINNYATGVSAEFFKQLSAWHPYDGFLLSLLLSS HSALTTEIGVECLGSDDLVRAFLFLENHGDRISQLGAIEIGFRILPERPEIEHLIINLIKQIRDDDVNGDVSGFKILSAL FVLVDGELSKIRLFSEEPPFYRRLASLAQAALICRQLFDSNIDIHAFYEWAVNNRGEQHYFQSLVDMRMEPRWNPDFGMA AQIKADFYGRILIASQRYRMNIKDGELYELVFGNESGSLDPLYEFPAPFISGPLEGGENSLNILPTELTETIESQLNADE IGPKSFITLVNSALIYRVHSDQAELAAKALKLGNYRMTNIESKSQLLGILNGLATVVASTRSKTLANALRIIVRRYRRDA QYPLSIDEAIKFCLVAGACHDSLKEWREFVGDWLTELAFCPLADKEGEVFHSRLMCICHAVPELWVSCGRADAALQAHNA SRQYV >Mature_645_residues MKNSQARTRSALIVLGLMPPLIRNTLFDDSDFIEECGVSAEVVLILGDSIVSFHRSELFNAIRAIFRGAYIKKIADTTGR KWKLRSTNEVGELPRFILSRGLQNLNLPDFFALSPDISFRLKALDKVASEFNFPYDPQQRWKNILKERAIKDDEFDAFQS DLRDTPIYVMRSIRSKIVSRRMSLPTYVPPSRRYFQRLVGAYDGSVSINNYATGVSAEFFKQLSAWHPYDGFLLSLLLSS HSALTTEIGVECLGSDDLVRAFLFLENHGDRISQLGAIEIGFRILPERPEIEHLIINLIKQIRDDDVNGDVSGFKILSAL FVLVDGELSKIRLFSEEPPFYRRLASLAQAALICRQLFDSNIDIHAFYEWAVNNRGEQHYFQSLVDMRMEPRWNPDFGMA AQIKADFYGRILIASQRYRMNIKDGELYELVFGNESGSLDPLYEFPAPFISGPLEGGENSLNILPTELTETIESQLNADE IGPKSFITLVNSALIYRVHSDQAELAAKALKLGNYRMTNIESKSQLLGILNGLATVVASTRSKTLANALRIIVRRYRRDA QYPLSIDEAIKFCLVAGACHDSLKEWREFVGDWLTELAFCPLADKEGEVFHSRLMCICHAVPELWVSCGRADAALQAHNA SRQYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72997; Mature: 72997
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSQARTRSALIVLGLMPPLIRNTLFDDSDFIEECGVSAEVVLILGDSIVSFHRSELFN CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCHHHHHHHHHHHH AIRAIFRGAYIKKIADTTGRKWKLRSTNEVGELPRFILSRGLQNLNLPDFFALSPDISFR HHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCHHH LKALDKVASEFNFPYDPQQRWKNILKERAIKDDEFDAFQSDLRDTPIYVMRSIRSKIVSR HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH RMSLPTYVPPSRRYFQRLVGAYDGSVSINNYATGVSAEFFKQLSAWHPYDGFLLSLLLSS HHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHC HSALTTEIGVECLGSDDLVRAFLFLENHGDRISQLGAIEIGFRILPERPEIEHLIINLIK CCHHHHHHCHHCCCCHHHHHHHHHHHCCCCHHHHCCHHEECCEECCCCCCHHHHHHHHHH QIRDDDVNGDVSGFKILSALFVLVDGELSKIRLFSEEPPFYRRLASLAQAALICRQLFDS HHCCCCCCCCHHHHHHHHHHHHHHCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC NIDIHAFYEWAVNNRGEQHYFQSLVDMRMEPRWNPDFGMAAQIKADFYGRILIASQRYRM CCCEEEEEEEHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCEEE NIKDGELYELVFGNESGSLDPLYEFPAPFISGPLEGGENSLNILPTELTETIESQLNADE ECCCCCEEEEEECCCCCCCCCHHHCCCHHHCCCCCCCCCCCEECHHHHHHHHHHHCCCCC IGPKSFITLVNSALIYRVHSDQAELAAKALKLGNYRMTNIESKSQLLGILNGLATVVAST CCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHH RSKTLANALRIIVRRYRRDAQYPLSIDEAIKFCLVAGACHDSLKEWREFVGDWLTELAFC HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLADKEGEVFHSRLMCICHAVPELWVSCGRADAALQAHNASRQYV CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MKNSQARTRSALIVLGLMPPLIRNTLFDDSDFIEECGVSAEVVLILGDSIVSFHRSELFN CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCHHHHHHHHHHHH AIRAIFRGAYIKKIADTTGRKWKLRSTNEVGELPRFILSRGLQNLNLPDFFALSPDISFR HHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCHHH LKALDKVASEFNFPYDPQQRWKNILKERAIKDDEFDAFQSDLRDTPIYVMRSIRSKIVSR HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH RMSLPTYVPPSRRYFQRLVGAYDGSVSINNYATGVSAEFFKQLSAWHPYDGFLLSLLLSS HHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHC HSALTTEIGVECLGSDDLVRAFLFLENHGDRISQLGAIEIGFRILPERPEIEHLIINLIK CCHHHHHHCHHCCCCHHHHHHHHHHHCCCCHHHHCCHHEECCEECCCCCCHHHHHHHHHH QIRDDDVNGDVSGFKILSALFVLVDGELSKIRLFSEEPPFYRRLASLAQAALICRQLFDS HHCCCCCCCCHHHHHHHHHHHHHHCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC NIDIHAFYEWAVNNRGEQHYFQSLVDMRMEPRWNPDFGMAAQIKADFYGRILIASQRYRM CCCEEEEEEEHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCEEE NIKDGELYELVFGNESGSLDPLYEFPAPFISGPLEGGENSLNILPTELTETIESQLNADE ECCCCCEEEEEECCCCCCCCCHHHCCCHHHCCCCCCCCCCCEECHHHHHHHHHHHCCCCC IGPKSFITLVNSALIYRVHSDQAELAAKALKLGNYRMTNIESKSQLLGILNGLATVVAST CCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHH RSKTLANALRIIVRRYRRDAQYPLSIDEAIKFCLVAGACHDSLKEWREFVGDWLTELAFC HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLADKEGEVFHSRLMCICHAVPELWVSCGRADAALQAHNASRQYV CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA