| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356598
Identifier: 119356598
GI number: 119356598
Start: 871030
End: 871449
Strand: Direct
Name: 119356598
Synonym: Cpha266_0766
Alternate gene names: NA
Gene position: 871030-871449 (Clockwise)
Preceding gene: 119356588
Following gene: 119356599
Centisome position: 27.79
GC content: 51.19
Gene sequence:
>420_bases ATGGGAACAGAAGAAAAACGCATGGCGACTAAGCCTGTTGACGATCAGATCCGGCAAGTGCTTGAACGGCATAAGGCCAT CCGTCTGGCGCTGTTATTTGGCTCATTGGCCAAAGGTACGGCTCATCGTGAAAGCGATCTCGATCTGGCGGTCGGTGCGG ATCATCCGCTCGACGCAGATGAAACCATGGAACTGATTTCAGATTTGGCAGAAGCAACAGGTCGTCCTGTTGATCTGATC GACCTGTCAACGGTCGGAGAGCCGCTGCTTGGCCGGATTATAGCAGGAGGACGAAGAATAGTTGGCAGCAATACGCTCTA TGCCGGGTTATTGCTCAAACATCTTTATAACCAGGAGGATTTCGTGCCTTATCAGAGAAGAATTCTCAAGGAGCGGAGGG AAGCATGGATTGGCCGTTAA
Upstream 100 bases:
>100_bases GATTTTTCTTCGGTTGTGATGCCACCCGCAATGAGTGAATGATGCTAAATGAGTATATTTCAAAGGTAGTTATACTTTGT TGTTGAGGAGACGGAGAATT
Downstream 100 bases:
>100_bases TCGAACAGAAACTTGAGTCGTTGCGTCGGTCAATTTTCAGGGTTAAAGAAAAATGTCCTGAAACCGCTGCCGGGCTTGCA GCCGATTACGACGCTCAGGA
Product: DNA polymerase beta subunit
Products: NA
Alternate protein names: DNA Polymerase Beta Domain-Containing Protein Region; DNA Polymerase Beta Domain Protein Region; Nucleotidyltransferase Domain-Containing Protein
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MGTEEKRMATKPVDDQIRQVLERHKAIRLALLFGSLAKGTAHRESDLDLAVGADHPLDADETMELISDLAEATGRPVDLI DLSTVGEPLLGRIIAGGRRIVGSNTLYAGLLLKHLYNQEDFVPYQRRILKERREAWIGR
Sequences:
>Translated_139_residues MGTEEKRMATKPVDDQIRQVLERHKAIRLALLFGSLAKGTAHRESDLDLAVGADHPLDADETMELISDLAEATGRPVDLI DLSTVGEPLLGRIIAGGRRIVGSNTLYAGLLLKHLYNQEDFVPYQRRILKERREAWIGR >Mature_138_residues GTEEKRMATKPVDDQIRQVLERHKAIRLALLFGSLAKGTAHRESDLDLAVGADHPLDADETMELISDLAEATGRPVDLID LSTVGEPLLGRIIAGGRRIVGSNTLYAGLLLKHLYNQEDFVPYQRRILKERREAWIGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15526; Mature: 15395
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTEEKRMATKPVDDQIRQVLERHKAIRLALLFGSLAKGTAHRESDLDLAVGADHPLDAD CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHH ETMELISDLAEATGRPVDLIDLSTVGEPLLGRIIAGGRRIVGSNTLYAGLLLKHLYNQED HHHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCC FVPYQRRILKERREAWIGR CCHHHHHHHHHHHHHHCCC >Mature Secondary Structure GTEEKRMATKPVDDQIRQVLERHKAIRLALLFGSLAKGTAHRESDLDLAVGADHPLDAD CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHH ETMELISDLAEATGRPVDLIDLSTVGEPLLGRIIAGGRRIVGSNTLYAGLLLKHLYNQED HHHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCC FVPYQRRILKERREAWIGR CCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA