| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is perR [H]
Identifier: 119356587
GI number: 119356587
Start: 856218
End: 856649
Strand: Direct
Name: perR [H]
Synonym: Cpha266_0754
Alternate gene names: 119356587
Gene position: 856218-856649 (Clockwise)
Preceding gene: 119356586
Following gene: 119356588
Centisome position: 27.32
GC content: 53.7
Gene sequence:
>432_bases ATGGTTATTCTTATGCAGCAATCCGCTTCACCAAAACCCCTTCGCTACAGCCGACAGCGCGAACGTCTGCTTGAGGTACT GCGCGGAACGGCCACGCATCCGACCGCCGGGTGGCTTTACGATATGCTGAAACCGGAATTCCCCAACCTCAGCCTCGGCA CCGTTTACCGGAATCTTGCCGTACTGATCGAACAGGGAGTTGTCAAAAAAATCGATTCCGGCAGCACCTTCGACAGGTAT GAAGCCAAAACCACGCCCCACTACCACCTGATATGCCGTGAATGCGGAACCATCATCGATTTTGAAAAGCGCCTCTTTCC GGAAATAGACGCGGTCATAAGCGAGGTGGCCGACTTTACTGTTGAAGGGCATCGCATCGATTTTTTCGGCACATGCAGCG CCTGCCGCGACCGGAACAGGAATAACTCTTGA
Upstream 100 bases:
>100_bases GACCACGACATGGAGTTGCCCGGCGTTTTTTACCACAGGAAAAGTGTCCGGTTTCGGCTTTCGGAAAGAAATCGTACTTT CAATGCAGCAACAACACATG
Downstream 100 bases:
>100_bases TTGAACCGGATATTTTTTTTATTCTATAAGTAATAATCATTCCGATTACTGTTCAAAACAGTTCTGCCACCCGATCAGAG CAATCGGGTTTCGGAACACT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MVILMQQSASPKPLRYSRQRERLLEVLRGTATHPTAGWLYDMLKPEFPNLSLGTVYRNLAVLIEQGVVKKIDSGSTFDRY EAKTTPHYHLICRECGTIIDFEKRLFPEIDAVISEVADFTVEGHRIDFFGTCSACRDRNRNNS
Sequences:
>Translated_143_residues MVILMQQSASPKPLRYSRQRERLLEVLRGTATHPTAGWLYDMLKPEFPNLSLGTVYRNLAVLIEQGVVKKIDSGSTFDRY EAKTTPHYHLICRECGTIIDFEKRLFPEIDAVISEVADFTVEGHRIDFFGTCSACRDRNRNNS >Mature_143_residues MVILMQQSASPKPLRYSRQRERLLEVLRGTATHPTAGWLYDMLKPEFPNLSLGTVYRNLAVLIEQGVVKKIDSGSTFDRY EAKTTPHYHLICRECGTIIDFEKRLFPEIDAVISEVADFTVEGHRIDFFGTCSACRDRNRNNS
Specific function: Manganese-dependent repressor that controls a regulon of oxidative stress resistance and iron-storage proteins. May act as a hydrogen peroxide and organic hydroperoxide sensor [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16381; Mature: 16381
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVILMQQSASPKPLRYSRQRERLLEVLRGTATHPTAGWLYDMLKPEFPNLSLGTVYRNLA CEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH VLIEQGVVKKIDSGSTFDRYEAKTTPHYHLICRECGTIIDFEKRLFPEIDAVISEVADFT HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC VEGHRIDFFGTCSACRDRNRNNS CCCCEEEEEECCHHHHCCCCCCC >Mature Secondary Structure MVILMQQSASPKPLRYSRQRERLLEVLRGTATHPTAGWLYDMLKPEFPNLSLGTVYRNLA CEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH VLIEQGVVKKIDSGSTFDRYEAKTTPHYHLICRECGTIIDFEKRLFPEIDAVISEVADFT HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC VEGHRIDFFGTCSACRDRNRNNS CCCCEEEEEECCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA