| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356586
Identifier: 119356586
GI number: 119356586
Start: 855892
End: 856218
Strand: Direct
Name: 119356586
Synonym: Cpha266_0753
Alternate gene names: NA
Gene position: 855892-856218 (Clockwise)
Preceding gene: 119356584
Following gene: 119356587
Centisome position: 27.31
GC content: 47.71
Gene sequence:
>327_bases ATGAAACACCGCGTAATGCGTGACGACTTTACGTGCCATAGGAAATCTCCGTTGATTGATTTGGAAAGAAAAGGGGTGCA TGATTCCGGAACATCCTGCCAGACCGCCCGCCATGTATCAACCCTGCCTGAAGGAGGGTCAATGCATGCTGTTGATGAAT TCTGCCGGATGCCGGTTAACAGGAAAGTTAGGCTTTTAAACAAGTATATCCATGTCCTGTTTTCCCGACCACGACATGGA GTTGCCCGGCGTTTTTTACCACAGGAAAAGTGTCCGGTTTCGGCTTTCGGAAAGAAATCGTACTTTCAATGCAGCAACAA CACATGA
Upstream 100 bases:
>100_bases GATCGACGATGTATTGCGCTTCTGCAAAAGGAATTCCCGAAACGGAATCCGCCCCGCCGCCCTGATAATAAAACGCTATG TCCGATGTGCTCCCGATGTT
Downstream 100 bases:
>100_bases TGGTTATTCTTATGCAGCAATCCGCTTCACCAAAACCCCTTCGCTACAGCCGACAGCGCGAACGTCTGCTTGAGGTACTG CGCGGAACGGCCACGCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MKHRVMRDDFTCHRKSPLIDLERKGVHDSGTSCQTARHVSTLPEGGSMHAVDEFCRMPVNRKVRLLNKYIHVLFSRPRHG VARRFLPQEKCPVSAFGKKSYFQCSNNT
Sequences:
>Translated_108_residues MKHRVMRDDFTCHRKSPLIDLERKGVHDSGTSCQTARHVSTLPEGGSMHAVDEFCRMPVNRKVRLLNKYIHVLFSRPRHG VARRFLPQEKCPVSAFGKKSYFQCSNNT >Mature_108_residues MKHRVMRDDFTCHRKSPLIDLERKGVHDSGTSCQTARHVSTLPEGGSMHAVDEFCRMPVNRKVRLLNKYIHVLFSRPRHG VARRFLPQEKCPVSAFGKKSYFQCSNNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12470; Mature: 12470
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHRVMRDDFTCHRKSPLIDLERKGVHDSGTSCQTARHVSTLPEGGSMHAVDEFCRMPVN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCC RKVRLLNKYIHVLFSRPRHGVARRFLPQEKCPVSAFGKKSYFQCSNNT HHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCC >Mature Secondary Structure MKHRVMRDDFTCHRKSPLIDLERKGVHDSGTSCQTARHVSTLPEGGSMHAVDEFCRMPVN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCC RKVRLLNKYIHVLFSRPRHGVARRFLPQEKCPVSAFGKKSYFQCSNNT HHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA