| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356551
Identifier: 119356551
GI number: 119356551
Start: 818626
End: 819132
Strand: Direct
Name: 119356551
Synonym: Cpha266_0717
Alternate gene names: NA
Gene position: 818626-819132 (Clockwise)
Preceding gene: 119356550
Following gene: 119356554
Centisome position: 26.12
GC content: 51.08
Gene sequence:
>507_bases ATGGCACAAGTCAATTTAAGGGTCAGTGCGTTGTGTGTGCAGGACGACTGTGTTCTGCTCATCGAACACAAGAGTTTTGC TCCGGATGATCCGGAGTTGCCGGGACGGTACTGGATTCTGCCTGGAGGTGTAGTTGAACGGGGCGAGACTCTTGATGAAG CTTTGCGAAGAGAGATGAAGGAGGAGACAGGTTTGTCGTGCAGTGTTGGAAGCCTGCTCTTTATCAAGGAGTTGCTCTAT CCCTACCCTGGGGCAGAGGAGGCAGGAAACATGCATCACTCCGTATCGCTTGGTTTTTATTGTACGGTGACCGGCGGGGA GCTGATAACCGGCAAGGATCCGGAGTATGCCGATGATCAGCAGATGATCGTTGAGGTGAAATGGATTCCGGTAGCAGAAC TCGATCACTATGAGCTCTATCCGCCTTTTCTTGAAGGATATATCCGCCAGCATCAGTCCGATAACTTCAGCACCGCCACA CCGGAATTTTTTGTTTCGATGCAGTAG
Upstream 100 bases:
>100_bases TTTCCCCTAAACTGTTCAAAAGAATCAGTTCATGCCGCAAGATTTAATTTTATTTTATTCTTTTTTTATAACAGGTTACT ATCAAACAAAAAGAGGACTT
Downstream 100 bases:
>100_bases GGAGGGGGACGAACCAGGTGTTAAGTTGGGGGAATGGGTTTGTTTGTTAATGCGAATTTGTCCTGTCATCGCGAATTTGT CCTGTCATCGCAAATTTGTC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NUDIX/MutT Family Protein; NUDIX Hydrolase Family Protein; MutT-Like Protein; MutT/NUDIX Family Protein; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; Nudix Hydrolase; Nudix/MutT Family Protein; Mutt/Nudix Family Protein
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MAQVNLRVSALCVQDDCVLLIEHKSFAPDDPELPGRYWILPGGVVERGETLDEALRREMKEETGLSCSVGSLLFIKELLY PYPGAEEAGNMHHSVSLGFYCTVTGGELITGKDPEYADDQQMIVEVKWIPVAELDHYELYPPFLEGYIRQHQSDNFSTAT PEFFVSMQ
Sequences:
>Translated_168_residues MAQVNLRVSALCVQDDCVLLIEHKSFAPDDPELPGRYWILPGGVVERGETLDEALRREMKEETGLSCSVGSLLFIKELLY PYPGAEEAGNMHHSVSLGFYCTVTGGELITGKDPEYADDQQMIVEVKWIPVAELDHYELYPPFLEGYIRQHQSDNFSTAT PEFFVSMQ >Mature_167_residues AQVNLRVSALCVQDDCVLLIEHKSFAPDDPELPGRYWILPGGVVERGETLDEALRREMKEETGLSCSVGSLLFIKELLYP YPGAEEAGNMHHSVSLGFYCTVTGGELITGKDPEYADDQQMIVEVKWIPVAELDHYELYPPFLEGYIRQHQSDNFSTATP EFFVSMQ
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18919; Mature: 18787
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVNLRVSALCVQDDCVLLIEHKSFAPDDPELPGRYWILPGGVVERGETLDEALRREMK CCEEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH EETGLSCSVGSLLFIKELLYPYPGAEEAGNMHHSVSLGFYCTVTGGELITGKDPEYADDQ HHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCEEEECCCCCCCCCC QMIVEVKWIPVAELDHYELYPPFLEGYIRQHQSDNFSTATPEFFVSMQ EEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEC >Mature Secondary Structure AQVNLRVSALCVQDDCVLLIEHKSFAPDDPELPGRYWILPGGVVERGETLDEALRREMK CEEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH EETGLSCSVGSLLFIKELLYPYPGAEEAGNMHHSVSLGFYCTVTGGELITGKDPEYADDQ HHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCEEEECCCCCCCCCC QMIVEVKWIPVAELDHYELYPPFLEGYIRQHQSDNFSTATPEFFVSMQ EEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA