| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is mtnA [H]
Identifier: 119356536
GI number: 119356536
Start: 801793
End: 802857
Strand: Reverse
Name: mtnA [H]
Synonym: Cpha266_0701
Alternate gene names: 119356536
Gene position: 802857-801793 (Counterclockwise)
Preceding gene: 119356537
Following gene: 119356535
Centisome position: 25.62
GC content: 51.36
Gene sequence:
>1065_bases ATGATAGATGCCATTTCGTTCAATGAGGGTACGCTCCGCTACCTCGATCAGCGTTACCTTCCGCTCCGTGAAGAGCATAT CTCGACAAAAGATCACCGGGAGGCGATAGAAGCCATTAAAACCCTTGCCGTACGAGGAGCGCCTCTTATCGGCGTTGCCG CTGCCTATACGGTCATCCTCGGCATCAACAGCTACCGTGGTGATAAAGAGGGCTTCCCCTGCTTTTTCGGGAACCTGATT GCCGATGTTGAAGCATCGCGCCCAACCGCGGTCAATCTCTTTTTTGCCACGAAAAAACTAAAAGCCGTATATGACAGGAA CTTCAACAGCGATTCGCTTGAAGTGCTTTTTGCCAAAATGCTTTTCGAAGCACGACAGATCCACGATGACGAAATAGCCA ATTGTGATGCCATGGCACAACACGGCGTTCGCCAGATCAGGGAAGATCTTGCTGAAATCCTGAAAACAAGAAAACTCAAT GTGCTGACCCACTGCAACACCGGAACACTTGCCACCGGAGGCTCTGGAACGGCGCTCGGCGTCATCAAGCTTGCATGGCA GGAGGGACTTATTGAAAAGGTCATTACCGCCGAAAGCCGCCCGCTTTTGCAGGGACTTCGTCTTACCGCCTGGGAACTTG AACAGGAAAAAATACCCTTTTTCTCCATTTCAGACTCATCATCAGCCTTTCTCATGCAGCGCGGCATGATCGATTTCGGC ATTGTCGGCGCTGACCGAATCGCTGCCAACGGCGATACAGCCAACAAGATCGGTACCTGCGCCCATGCGTTGAGCGCCTG GCATCACAATATCCCGTTCTATATCGCAGCTCCGGTCTCAACCATTGATATCACGCTTTCCGACGGGACACAAATACCCA TCGAAGAGCGCAGCGCCGATGAACTGAGAACCATTTTCGGCACCCAGGTTGCAACCTCGACTACACCGGTAATTAACTAT GCTTTTGATGTCACTCCGGGAAAATTCCTCCGGGGAATCATCACGGACAAGAAAGCTGTAGTCGGAGACTATCTGAACGG TCTTGGCCAACTGTTTGCAGAGTAA
Upstream 100 bases:
>100_bases GAGGAGATTATTGAGGTTTCCAACCATGCAGAACCCAAAATGACCGCCATCTTCAAAGCCGTTGTCTCAAACCTCTAACC CGATCAACATCATTTGACCC
Downstream 100 bases:
>100_bases AACACCAGGCAAAAAGAAGACAACAAAAAAGATCGGAACGTTCTCTTGTTCCGATCTTTTTTGTTACAGCTCCATGGCGC GGCGATGTTCTCTCTGTTCT
Product: translation initiation factor 2B subunit I
Products: NA
Alternate protein names: M1Pi; MTR-1-P isomerase; S-methyl-5-thioribose-1-phosphate isomerase [H]
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MIDAISFNEGTLRYLDQRYLPLREEHISTKDHREAIEAIKTLAVRGAPLIGVAAAYTVILGINSYRGDKEGFPCFFGNLI ADVEASRPTAVNLFFATKKLKAVYDRNFNSDSLEVLFAKMLFEARQIHDDEIANCDAMAQHGVRQIREDLAEILKTRKLN VLTHCNTGTLATGGSGTALGVIKLAWQEGLIEKVITAESRPLLQGLRLTAWELEQEKIPFFSISDSSSAFLMQRGMIDFG IVGADRIAANGDTANKIGTCAHALSAWHHNIPFYIAAPVSTIDITLSDGTQIPIEERSADELRTIFGTQVATSTTPVINY AFDVTPGKFLRGIITDKKAVVGDYLNGLGQLFAE
Sequences:
>Translated_354_residues MIDAISFNEGTLRYLDQRYLPLREEHISTKDHREAIEAIKTLAVRGAPLIGVAAAYTVILGINSYRGDKEGFPCFFGNLI ADVEASRPTAVNLFFATKKLKAVYDRNFNSDSLEVLFAKMLFEARQIHDDEIANCDAMAQHGVRQIREDLAEILKTRKLN VLTHCNTGTLATGGSGTALGVIKLAWQEGLIEKVITAESRPLLQGLRLTAWELEQEKIPFFSISDSSSAFLMQRGMIDFG IVGADRIAANGDTANKIGTCAHALSAWHHNIPFYIAAPVSTIDITLSDGTQIPIEERSADELRTIFGTQVATSTTPVINY AFDVTPGKFLRGIITDKKAVVGDYLNGLGQLFAE >Mature_354_residues MIDAISFNEGTLRYLDQRYLPLREEHISTKDHREAIEAIKTLAVRGAPLIGVAAAYTVILGINSYRGDKEGFPCFFGNLI ADVEASRPTAVNLFFATKKLKAVYDRNFNSDSLEVLFAKMLFEARQIHDDEIANCDAMAQHGVRQIREDLAEILKTRKLN VLTHCNTGTLATGGSGTALGVIKLAWQEGLIEKVITAESRPLLQGLRLTAWELEQEKIPFFSISDSSSAFLMQRGMIDFG IVGADRIAANGDTANKIGTCAHALSAWHHNIPFYIAAPVSTIDITLSDGTQIPIEERSADELRTIFGTQVATSTTPVINY AFDVTPGKFLRGIITDKKAVVGDYLNGLGQLFAE
Specific function: Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P) [H]
COG id: COG0182
COG function: function code J; Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily [H]
Homologues:
Organism=Homo sapiens, GI72534748, Length=340, Percent_Identity=37.9411764705882, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI23943880, Length=338, Percent_Identity=33.4319526627219, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17557462, Length=336, Percent_Identity=36.9047619047619, Blast_Score=195, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6325375, Length=395, Percent_Identity=30.126582278481, Blast_Score=162, Evalue=9e-41, Organism=Drosophila melanogaster, GI21357667, Length=351, Percent_Identity=35.8974358974359, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24651647, Length=351, Percent_Identity=35.8974358974359, Blast_Score=209, Evalue=2e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000649 - InterPro: IPR005251 - InterPro: IPR011559 [H]
Pfam domain/function: PF01008 IF-2B [H]
EC number: =5.3.1.23 [H]
Molecular weight: Translated: 38810; Mature: 38810
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDAISFNEGTLRYLDQRYLPLREEHISTKDHREAIEAIKTLAVRGAPLIGVAAAYTVIL CCCCEECCCCHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH GINSYRGDKEGFPCFFGNLIADVEASRPTAVNLFFATKKLKAVYDRNFNSDSLEVLFAKM CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHH LFEARQIHDDEIANCDAMAQHGVRQIREDLAEILKTRKLNVLTHCNTGTLATGGSGTALG HHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCHH VIKLAWQEGLIEKVITAESRPLLQGLRLTAWELEQEKIPFFSISDSSSAFLMQRGMIDFG HHHHHHHHHHHHHHHHCCCCHHHHCCHHHHEECHHHCCCEEEECCCCCHHHHHCCCCCEE IVGADRIAANGDTANKIGTCAHALSAWHHNIPFYIAAPVSTIDITLSDGTQIPIEERSAD EECCCCEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCCCCCCCCHH ELRTIFGTQVATSTTPVINYAFDVTPGKFLRGIITDKKAVVGDYLNGLGQLFAE HHHHHHHCHHCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIDAISFNEGTLRYLDQRYLPLREEHISTKDHREAIEAIKTLAVRGAPLIGVAAAYTVIL CCCCEECCCCHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH GINSYRGDKEGFPCFFGNLIADVEASRPTAVNLFFATKKLKAVYDRNFNSDSLEVLFAKM CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHH LFEARQIHDDEIANCDAMAQHGVRQIREDLAEILKTRKLNVLTHCNTGTLATGGSGTALG HHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCHH VIKLAWQEGLIEKVITAESRPLLQGLRLTAWELEQEKIPFFSISDSSSAFLMQRGMIDFG HHHHHHHHHHHHHHHHCCCCHHHHCCHHHHEECHHHCCCEEEECCCCCHHHHHCCCCCEE IVGADRIAANGDTANKIGTCAHALSAWHHNIPFYIAAPVSTIDITLSDGTQIPIEERSAD EECCCCEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCCCCCCCCHH ELRTIFGTQVATSTTPVINYAFDVTPGKFLRGIITDKKAVVGDYLNGLGQLFAE HHHHHHHCHHCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]