| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356530
Identifier: 119356530
GI number: 119356530
Start: 793695
End: 794120
Strand: Direct
Name: 119356530
Synonym: Cpha266_0695
Alternate gene names: NA
Gene position: 793695-794120 (Clockwise)
Preceding gene: 119356529
Following gene: 119356550
Centisome position: 25.33
GC content: 49.3
Gene sequence:
>426_bases ATGGCCATTATGACAGAGTTTTTAAATTTGATTGTGCCTGTTTCTGTGATTGAAGAGAAGTATCCCGGGGGATGGGAACG TTGTTTGCAAGACCACAAGGTTGCCATTGGCGCCCGTGTCTGGTTTGACGACTTCCTCTTCCGTGACGGAGCGATGAACC CGACGGCAATGCTGCAGCTGCTCAATGAGTGGTGGAAATTAGGTTTTGAGTGTTACGCAGAAAAAGATGGAAAAAAATAC TGGAAGGATGTCTGTGTTTATGAGGGTTCGCTCGAAGGTACGCCTATGCCATGCGATTGGTTGGCTGAGGATCCGGAGAG CCGGAGCGTTTATCTGAAAGGTACCGCAATGGGTGAGATTAAAGGGCGTGACTGGGACTTGATCGATGACTGGGAGGCGT TACCGTTTCCCGAAAACGGACGTTAA
Upstream 100 bases:
>100_bases AGGATGGCTTAATTGATGGTTGCGTTCGTTCTTTGTTGTCTGTTTTAATGGACAACGATGTTCAGCCGCGAAAGGAATAA TTTTATACGAAGGATGCTCT
Downstream 100 bases:
>100_bases GAAGCGGGCTCCTTTTTTCAGAGAGGAAGTCTGTACTCTTCAAGAATAACCCTGACATGTCGGGGAACCAGTGTTTCCAG ATGTTCCGGATAGCGGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MAIMTEFLNLIVPVSVIEEKYPGGWERCLQDHKVAIGARVWFDDFLFRDGAMNPTAMLQLLNEWWKLGFECYAEKDGKKY WKDVCVYEGSLEGTPMPCDWLAEDPESRSVYLKGTAMGEIKGRDWDLIDDWEALPFPENGR
Sequences:
>Translated_141_residues MAIMTEFLNLIVPVSVIEEKYPGGWERCLQDHKVAIGARVWFDDFLFRDGAMNPTAMLQLLNEWWKLGFECYAEKDGKKY WKDVCVYEGSLEGTPMPCDWLAEDPESRSVYLKGTAMGEIKGRDWDLIDDWEALPFPENGR >Mature_140_residues AIMTEFLNLIVPVSVIEEKYPGGWERCLQDHKVAIGARVWFDDFLFRDGAMNPTAMLQLLNEWWKLGFECYAEKDGKKYW KDVCVYEGSLEGTPMPCDWLAEDPESRSVYLKGTAMGEIKGRDWDLIDDWEALPFPENGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16333; Mature: 16202
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIMTEFLNLIVPVSVIEEKYPGGWERCLQDHKVAIGARVWFDDFLFRDGAMNPTAMLQL CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHH LNEWWKLGFECYAEKDGKKYWKDVCVYEGSLEGTPMPCDWLAEDPESRSVYLKGTAMGEI HHHHHHCCHHEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEECC KGRDWDLIDDWEALPFPENGR CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AIMTEFLNLIVPVSVIEEKYPGGWERCLQDHKVAIGARVWFDDFLFRDGAMNPTAMLQL CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHH LNEWWKLGFECYAEKDGKKYWKDVCVYEGSLEGTPMPCDWLAEDPESRSVYLKGTAMGEI HHHHHHCCHHEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEECC KGRDWDLIDDWEALPFPENGR CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA