| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356523
Identifier: 119356523
GI number: 119356523
Start: 786493
End: 787410
Strand: Reverse
Name: 119356523
Synonym: Cpha266_0688
Alternate gene names: NA
Gene position: 787410-786493 (Counterclockwise)
Preceding gene: 119356524
Following gene: 119356521
Centisome position: 25.13
GC content: 45.1
Gene sequence:
>918_bases TTGGCAAAGATTAACTCCCGCACGATAAAGCTGCTCAAGACACTGATTCAGCTTCTTGTCACCTGTCTGGCACTTTTTCT TGTCCTGACCAAAACTGATATAGCACAACTTGCCGGCATTATCCGCAAAGCAGATCCATGGTATCTTCTCCTCGCGCTTC TGTTTTTCAACATCTCCAAAATCCTCAATGCCCTTCGACTTAACCGTTTTTTCAAAGTCATCGGCATCAGGCTGTCAGCG AGCTACAATCTGAAGCTCTACTACCTTGGAATGTTCTACAATCTTTTTCTGCCTGGCGGCATCGGAGGAGACGGTTATAA AATATATGTCCTGAAAAAAAATCACAGCTTAAAAACAATCAATGTTTTCAACGCTGTTCTCTGGGACCGTATCTGCGGCA TTGTTGCTCTTATAGTTCTCTCCCTTATTCTGCTCCTGCAAAGCTCATTTGCGGCTAAACTGCCCGACCTTGTTCCCTAT GCATGGGGGTTGCTTATTCTGCTCTACCCCTTTGCGCTCCTGCTCAACAAGCTGTTCTACCGGCAGTTCATACCCGTTTT TGCGGTCACCACGCTCGAGTCGCTTATCATTCAGTCAACGCAGGTTATCTCGGCACTCTTTATTCTTAAAGCGATCTCCT CCACTACCCACATCATTGACTATCTTTCAATTTTTCTGATGTCAACCGTTGCGACAATACTGCCAATCACCATTGGTGGT GCCGGTGCGAGGGAAATTACCTTTTACTACCTTCTTGATTATATTCATCTTGAAACCAGCACGGGAGTGGCATTATCGCT TATTTTCTTCGGAATTTCAGCCATTTCGTCTCTTGCTGGTATTCTCGGCAGAACAAGACATGAAAAAAGTCTTCCCTCTG CTGAAGATTCTACTCCTTCCATGGCTGATCCTGAGTAA
Upstream 100 bases:
>100_bases ATCGGAATTCAGTTGATTACCACCGGGTTTATTGCCGAGTTCATCATGCGCACCTACTACGAATCACAGAACAAAAAACC CTATATCATCAAAAAGATCG
Downstream 100 bases:
>100_bases TCGAGAGGTCTTTAAGCCTGATCTGCCAATGTTCACGGTTATTCCAGCTTCTCTTTTCAAGAGAGTAGACCATGGCAACA ACAGGAGTATTCGAAGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MAKINSRTIKLLKTLIQLLVTCLALFLVLTKTDIAQLAGIIRKADPWYLLLALLFFNISKILNALRLNRFFKVIGIRLSA SYNLKLYYLGMFYNLFLPGGIGGDGYKIYVLKKNHSLKTINVFNAVLWDRICGIVALIVLSLILLLQSSFAAKLPDLVPY AWGLLILLYPFALLLNKLFYRQFIPVFAVTTLESLIIQSTQVISALFILKAISSTTHIIDYLSIFLMSTVATILPITIGG AGAREITFYYLLDYIHLETSTGVALSLIFFGISAISSLAGILGRTRHEKSLPSAEDSTPSMADPE
Sequences:
>Translated_305_residues MAKINSRTIKLLKTLIQLLVTCLALFLVLTKTDIAQLAGIIRKADPWYLLLALLFFNISKILNALRLNRFFKVIGIRLSA SYNLKLYYLGMFYNLFLPGGIGGDGYKIYVLKKNHSLKTINVFNAVLWDRICGIVALIVLSLILLLQSSFAAKLPDLVPY AWGLLILLYPFALLLNKLFYRQFIPVFAVTTLESLIIQSTQVISALFILKAISSTTHIIDYLSIFLMSTVATILPITIGG AGAREITFYYLLDYIHLETSTGVALSLIFFGISAISSLAGILGRTRHEKSLPSAEDSTPSMADPE >Mature_304_residues AKINSRTIKLLKTLIQLLVTCLALFLVLTKTDIAQLAGIIRKADPWYLLLALLFFNISKILNALRLNRFFKVIGIRLSAS YNLKLYYLGMFYNLFLPGGIGGDGYKIYVLKKNHSLKTINVFNAVLWDRICGIVALIVLSLILLLQSSFAAKLPDLVPYA WGLLILLYPFALLLNKLFYRQFIPVFAVTTLESLIIQSTQVISALFILKAISSTTHIIDYLSIFLMSTVATILPITIGGA GAREITFYYLLDYIHLETSTGVALSLIFFGISAISSLAGILGRTRHEKSLPSAEDSTPSMADPE
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33877; Mature: 33746
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKINSRTIKLLKTLIQLLVTCLALFLVLTKTDIAQLAGIIRKADPWYLLLALLFFNISK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ILNALRLNRFFKVIGIRLSASYNLKLYYLGMFYNLFLPGGIGGDGYKIYVLKKNHSLKTI HHHHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHCCCCCCCCCEEEEEEECCCCEEHH NVFNAVLWDRICGIVALIVLSLILLLQSSFAAKLPDLVPYAWGLLILLYPFALLLNKLFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH RQFIPVFAVTTLESLIIQSTQVISALFILKAISSTTHIIDYLSIFLMSTVATILPITIGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AGAREITFYYLLDYIHLETSTGVALSLIFFGISAISSLAGILGRTRHEKSLPSAEDSTPS CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC MADPE CCCCC >Mature Secondary Structure AKINSRTIKLLKTLIQLLVTCLALFLVLTKTDIAQLAGIIRKADPWYLLLALLFFNISK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ILNALRLNRFFKVIGIRLSASYNLKLYYLGMFYNLFLPGGIGGDGYKIYVLKKNHSLKTI HHHHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHCCCCCCCCCEEEEEEECCCCEEHH NVFNAVLWDRICGIVALIVLSLILLLQSSFAAKLPDLVPYAWGLLILLYPFALLLNKLFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH RQFIPVFAVTTLESLIIQSTQVISALFILKAISSTTHIIDYLSIFLMSTVATILPITIGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AGAREITFYYLLDYIHLETSTGVALSLIFFGISAISSLAGILGRTRHEKSLPSAEDSTPS CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC MADPE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA