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The map label for this gene is 119356517

Identifier: 119356517

GI number: 119356517

Start: 779681

End: 780244

Strand: Reverse

Name: 119356517

Synonym: Cpha266_0682

Alternate gene names: NA

Gene position: 780244-779681 (Counterclockwise)

Preceding gene: 119356518

Following gene: 119356516

Centisome position: 24.9

GC content: 45.39

Gene sequence:

>564_bases
ATGAAAATAAAAAGCTTATGGAAAGGAATGACGATCACAGGCATAATGATGATGACTTGTTTTTCCTTTCTGGCTTCAGC
GAATGAACAAACTGTCGGTATTGGCGAAAGATTCGGAGGCGGCATCGTTTTTTATATTTTCCAACCCGGCGAACAAGGTT
ATGTCGAAGGCGAACAGCACGGTCTGATTGTCGCTCTGGAGGATCAGGGGCGTGGTGTTGAGTGGAGCAACGTCACAACG
GCTTCCGTTAGTGGAACAACGACGGGATTAGGTGCCGGACGTGACAATACAACACTTATTATTTCTCAGGATGGCCATCA
GAATAGCGCAGCAAAACTCTGTGAAGATTATGTTTTTGAGGGATATAGCGACTGGTATTTGCCAAGCAGTGAAGAACTGG
ATAAATTATATTCAAACAAAGGTTTGGTCTATGGTTTTTCCGACGGGCACTGGAGTTCGTCAGAAAGCGGCCCTGGAGAT
GTCTGGGCTAATCTCGACTGCGGTGTATCCCGCTACCACATGAAAATGATTGGTATTCATGTTCGGGCAATTCGTTCTTT
TTAG

Upstream 100 bases:

>100_bases
TTTCTCAATCCTCTTTCTTGCTTTGCAATGCAAGATCGATTCTCCTGATTCCATTACAGTCCACTGAGTATCGCTGATCG
TGACACAAACCTGTAACTTC

Downstream 100 bases:

>100_bases
GTAATCTCATATTTGAGGACAATCATACCATTCGCCTTGCTGCCTTCCGACAGATTGCATAAACAAACAGTCACTGAATA
GATCATGGCGAACAAATGAA

Product: vir region protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKIKSLWKGMTITGIMMMTCFSFLASANEQTVGIGERFGGGIVFYIFQPGEQGYVEGEQHGLIVALEDQGRGVEWSNVTT
ASVSGTTTGLGAGRDNTTLIISQDGHQNSAAKLCEDYVFEGYSDWYLPSSEELDKLYSNKGLVYGFSDGHWSSSESGPGD
VWANLDCGVSRYHMKMIGIHVRAIRSF

Sequences:

>Translated_187_residues
MKIKSLWKGMTITGIMMMTCFSFLASANEQTVGIGERFGGGIVFYIFQPGEQGYVEGEQHGLIVALEDQGRGVEWSNVTT
ASVSGTTTGLGAGRDNTTLIISQDGHQNSAAKLCEDYVFEGYSDWYLPSSEELDKLYSNKGLVYGFSDGHWSSSESGPGD
VWANLDCGVSRYHMKMIGIHVRAIRSF
>Mature_187_residues
MKIKSLWKGMTITGIMMMTCFSFLASANEQTVGIGERFGGGIVFYIFQPGEQGYVEGEQHGLIVALEDQGRGVEWSNVTT
ASVSGTTTGLGAGRDNTTLIISQDGHQNSAAKLCEDYVFEGYSDWYLPSSEELDKLYSNKGLVYGFSDGHWSSSESGPGD
VWANLDCGVSRYHMKMIGIHVRAIRSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20433; Mature: 20433

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKSLWKGMTITGIMMMTCFSFLASANEQTVGIGERFGGGIVFYIFQPGEQGYVEGEQH
CCCHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCC
GLIVALEDQGRGVEWSNVTTASVSGTTTGLGAGRDNTTLIISQDGHQNSAAKLCEDYVFE
CEEEEECCCCCCEEECCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHC
GYSDWYLPSSEELDKLYSNKGLVYGFSDGHWSSSESGPGDVWANLDCGVSRYHMKMIGIH
CCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHE
VRAIRSF
EEEEECC
>Mature Secondary Structure
MKIKSLWKGMTITGIMMMTCFSFLASANEQTVGIGERFGGGIVFYIFQPGEQGYVEGEQH
CCCHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCC
GLIVALEDQGRGVEWSNVTTASVSGTTTGLGAGRDNTTLIISQDGHQNSAAKLCEDYVFE
CEEEEECCCCCCEEECCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHC
GYSDWYLPSSEELDKLYSNKGLVYGFSDGHWSSSESGPGDVWANLDCGVSRYHMKMIGIH
CCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHE
VRAIRSF
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA