| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356496
Identifier: 119356496
GI number: 119356496
Start: 754843
End: 755721
Strand: Reverse
Name: 119356496
Synonym: Cpha266_0661
Alternate gene names: NA
Gene position: 755721-754843 (Counterclockwise)
Preceding gene: 119356497
Following gene: 119356495
Centisome position: 24.11
GC content: 47.44
Gene sequence:
>879_bases ATGAGAAACCCCAATGCCTTGAAATGGAGCGACCTGAAAACCGGAATATTTTTCATTCTCGGTATTGGCTTTGCTGCCTA TCTTGGACTGGTGATCGGTAAAAACTCCAGCCTGTTCACTGGCGTAACCACCATAAAAATCATCTCCAATAATATGCAGG GCCTGGCCGAAAACAACTTTGTTTCGGTTTCCGGCAAAAAAATCGGAACCGTTTCAAAACTTGATTTTGTAACCAGCAAA GACTCGCTCTTTGTTGTTGCTGAACTTCGACTCCGCAATGAATTCGCCCCTCTGGTTTCCAGGGATGCAAAAGCCACCAT TAAAGCTCTTGGCATACTTGGCGACAAATATGTCGATATCACGACAGGCAAAGGTCCGGCGGTACAAAACGGAGATTATC TCGTACTCCAATCCGAAGAAGGTCTTGCTGATCTGACCAGCGGTGCGGGAGAGGCTCTAAAAAAAATCAATCTCCTGCTT GACCAGCTCAATAACGGAAAAGGTGTTGCCGGCAGACTGGTTTCAGATGAAAAAATGGGCACGGAGCTCGCCGAAACGGT AAGCAGCCTTAAAACCACCTCCGCCGAGCTCTCGAAAGTATCGCGCGAAGCATCGCATGGTAACGGCCTTCTGCCGAAGC TCCTGAACGACAAAGCCATGGCAAAAAACACCGAGCAGACTATAGAGCGCCTCAACAGGGCGGCTTCAGAGACAGAGTCG CTGATCGCTAAAATAAACAACGGTCAGGGAACAATCGGTCAGTTGCAGGCAAATCCTGCTCTCTACAACAATCTCAACAG ATCGCTCTCATCGCTTGATTCACTGCTTATGGATCTTAAAGAGAATCCGAAACGATATGTCCGTTTTTCACTTTTTTGA
Upstream 100 bases:
>100_bases TGATGTTGTTAACAAACTGCACGAATCAAGCCACCCGTTCATTCTTTCAATATTATCCGACAAAATTCTCGAAATTTAAC CTTAAAAGACAACACGCTGT
Downstream 100 bases:
>100_bases AAGATCGAAAACCGATCGCCTGGCCGTCATCCATCTCTTATTGACCATGTTCACGGTATTGGCAGGCATTGTTCCCGGCA GAGCATATGGAAGCAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Mammalian Cell Entry Related Domain-Containing Protein; VpsC Protein; Mce Family Protein; Virulence Factor MCE-Like Protein-Related Protein; Virulence Factor Mce Family Protein; Mce-Related Protein
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MRNPNALKWSDLKTGIFFILGIGFAAYLGLVIGKNSSLFTGVTTIKIISNNMQGLAENNFVSVSGKKIGTVSKLDFVTSK DSLFVVAELRLRNEFAPLVSRDAKATIKALGILGDKYVDITTGKGPAVQNGDYLVLQSEEGLADLTSGAGEALKKINLLL DQLNNGKGVAGRLVSDEKMGTELAETVSSLKTTSAELSKVSREASHGNGLLPKLLNDKAMAKNTEQTIERLNRAASETES LIAKINNGQGTIGQLQANPALYNNLNRSLSSLDSLLMDLKENPKRYVRFSLF
Sequences:
>Translated_292_residues MRNPNALKWSDLKTGIFFILGIGFAAYLGLVIGKNSSLFTGVTTIKIISNNMQGLAENNFVSVSGKKIGTVSKLDFVTSK DSLFVVAELRLRNEFAPLVSRDAKATIKALGILGDKYVDITTGKGPAVQNGDYLVLQSEEGLADLTSGAGEALKKINLLL DQLNNGKGVAGRLVSDEKMGTELAETVSSLKTTSAELSKVSREASHGNGLLPKLLNDKAMAKNTEQTIERLNRAASETES LIAKINNGQGTIGQLQANPALYNNLNRSLSSLDSLLMDLKENPKRYVRFSLF >Mature_292_residues MRNPNALKWSDLKTGIFFILGIGFAAYLGLVIGKNSSLFTGVTTIKIISNNMQGLAENNFVSVSGKKIGTVSKLDFVTSK DSLFVVAELRLRNEFAPLVSRDAKATIKALGILGDKYVDITTGKGPAVQNGDYLVLQSEEGLADLTSGAGEALKKINLLL DQLNNGKGVAGRLVSDEKMGTELAETVSSLKTTSAELSKVSREASHGNGLLPKLLNDKAMAKNTEQTIERLNRAASETES LIAKINNGQGTIGQLQANPALYNNLNRSLSSLDSLLMDLKENPKRYVRFSLF
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31395; Mature: 31395
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNPNALKWSDLKTGIFFILGIGFAAYLGLVIGKNSSLFTGVTTIKIISNNMQGLAENNF CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHEEEEEECCCCCCCCCCCE VSVSGKKIGTVSKLDFVTSKDSLFVVAELRLRNEFAPLVSRDAKATIKALGILGDKYVDI EEECCCCCCCHHHHHEEECCCCEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEE TTGKGPAVQNGDYLVLQSEEGLADLTSGAGEALKKINLLLDQLNNGKGVAGRLVSDEKMG ECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH TELAETVSSLKTTSAELSKVSREASHGNGLLPKLLNDKAMAKNTEQTIERLNRAASETES HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHH LIAKINNGQGTIGQLQANPALYNNLNRSLSSLDSLLMDLKENPKRYVRFSLF HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC >Mature Secondary Structure MRNPNALKWSDLKTGIFFILGIGFAAYLGLVIGKNSSLFTGVTTIKIISNNMQGLAENNF CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHEEEEEECCCCCCCCCCCE VSVSGKKIGTVSKLDFVTSKDSLFVVAELRLRNEFAPLVSRDAKATIKALGILGDKYVDI EEECCCCCCCHHHHHEEECCCCEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEE TTGKGPAVQNGDYLVLQSEEGLADLTSGAGEALKKINLLLDQLNNGKGVAGRLVSDEKMG ECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH TELAETVSSLKTTSAELSKVSREASHGNGLLPKLLNDKAMAKNTEQTIERLNRAASETES HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHH LIAKINNGQGTIGQLQANPALYNNLNRSLSSLDSLLMDLKENPKRYVRFSLF HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA