| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is yjeS [H]
Identifier: 119356493
GI number: 119356493
Start: 750621
End: 751583
Strand: Reverse
Name: yjeS [H]
Synonym: Cpha266_0658
Alternate gene names: 119356493
Gene position: 751583-750621 (Counterclockwise)
Preceding gene: 119356495
Following gene: 119356491
Centisome position: 23.98
GC content: 49.53
Gene sequence:
>963_bases ATGGCGGAACAAACAGACTCTATTATCCGTGCAATTAAAAAAGAGGCTTCTCGTCTCGGCTTCTGCGCTATCGGCTTCTC CTCCCTGAAGCCGCAGAACCTTGCCGTCGAGCGTCTGAACAATATGATTGATGAAGGGAGACATGGAGAGATGGACTATC TTGCAAACAGGATAAAAGAACGTGCAGACCCGTCACTGCTGCTTTCCGGCACAAAAACCATCATATCGGCAGCAATGAAC TACTACAGATCGACAACTCCACGACGTCCCGACCTGCCTCGAATATCGAACTATGCGCTGATCGAGGATTACCATATTGT CCTGAAAGATCGGCTGGGCCAGTTGCTCGCAAAAATACAGCAACTCTACCCAGAACCGCTTAACGGCCTCATTACTATTG ACAGTGCACCCGTTTTCGAAAAATCATGGGCTGAACAGGCTGGAATCGGTGCAAGCGCAAATAACACGCTCCTGATAATC CCCGCAGCCGGTTCCTATGTTTTTATTGGTGAAATTCTCATTGATAAACCCTTTGAAAGTGATATGAAACCGCTCGCGAA CCTCTGCGGTTCATGCCGAAAGTGTATCGAGAGCTGTCCGACAGGCGCGCTTGTCAGTCCAGGGAAAATTGATGCGCGAC GCTGCATTTCTTACCTTACCGTAGAGTTGAAACGGGAGTTCACCGCCGAAGAGTCCCTGATGGCAGGATCATGGCTTTTC GGTTGCGACTGCTGTCAGGAGAGCTGCCCCTATAACAGGGAGCGCAGAGGCCCACCGGAAGGAGTGTTTCATCCAAAAGA GCAACTTGAAAATCTGACCTGCGAAGAGATCCTGAACCTCAGCGGCTCAGGATTTAAAAAGCTGTTTTTCGGTACCCCTG TCTACCGCATCGGACTTCGAAGATTGAAACGTAACGCCCGAGCCGTTCAGGAAAACATGAACAGAACCGAAATAAAACCA TAA
Upstream 100 bases:
>100_bases ATCGGTTGTTAGATGCCTGAAGTTGTATATTTAACAATAAATAGTGGTTATACCAACTTCGCAGAAACAAGGCGGCCCAA ACACCCGGCAATTCCTTTCC
Downstream 100 bases:
>100_bases AGCAGCAACAAAAAAAGGCGCACCATCGGTACGCCTTTTTTCAGAATTACTCACGTATTGATCGAGAAAGCCCTCAGTGT TTGAAGTGGCGCATTCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MAEQTDSIIRAIKKEASRLGFCAIGFSSLKPQNLAVERLNNMIDEGRHGEMDYLANRIKERADPSLLLSGTKTIISAAMN YYRSTTPRRPDLPRISNYALIEDYHIVLKDRLGQLLAKIQQLYPEPLNGLITIDSAPVFEKSWAEQAGIGASANNTLLII PAAGSYVFIGEILIDKPFESDMKPLANLCGSCRKCIESCPTGALVSPGKIDARRCISYLTVELKREFTAEESLMAGSWLF GCDCCQESCPYNRERRGPPEGVFHPKEQLENLTCEEILNLSGSGFKKLFFGTPVYRIGLRRLKRNARAVQENMNRTEIKP
Sequences:
>Translated_320_residues MAEQTDSIIRAIKKEASRLGFCAIGFSSLKPQNLAVERLNNMIDEGRHGEMDYLANRIKERADPSLLLSGTKTIISAAMN YYRSTTPRRPDLPRISNYALIEDYHIVLKDRLGQLLAKIQQLYPEPLNGLITIDSAPVFEKSWAEQAGIGASANNTLLII PAAGSYVFIGEILIDKPFESDMKPLANLCGSCRKCIESCPTGALVSPGKIDARRCISYLTVELKREFTAEESLMAGSWLF GCDCCQESCPYNRERRGPPEGVFHPKEQLENLTCEEILNLSGSGFKKLFFGTPVYRIGLRRLKRNARAVQENMNRTEIKP >Mature_319_residues AEQTDSIIRAIKKEASRLGFCAIGFSSLKPQNLAVERLNNMIDEGRHGEMDYLANRIKERADPSLLLSGTKTIISAAMNY YRSTTPRRPDLPRISNYALIEDYHIVLKDRLGQLLAKIQQLYPEPLNGLITIDSAPVFEKSWAEQAGIGASANNTLLIIP AAGSYVFIGEILIDKPFESDMKPLANLCGSCRKCIESCPTGALVSPGKIDARRCISYLTVELKREFTAEESLMAGSWLFG CDCCQESCPYNRERRGPPEGVFHPKEQLENLTCEEILNLSGSGFKKLFFGTPVYRIGLRRLKRNARAVQENMNRTEIKP
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790608, Length=312, Percent_Identity=38.1410256410256, Blast_Score=199, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004453 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013542 - InterPro: IPR009051 [H]
Pfam domain/function: PF08331 DUF1730 [H]
EC number: NA
Molecular weight: Translated: 35755; Mature: 35623
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQTDSIIRAIKKEASRLGFCAIGFSSLKPQNLAVERLNNMIDEGRHGEMDYLANRIKE CCCHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH RADPSLLLSGTKTIISAAMNYYRSTTPRRPDLPRISNYALIEDYHIVLKDRLGQLLAKIQ HCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH QLYPEPLNGLITIDSAPVFEKSWAEQAGIGASANNTLLIIPAAGSYVFIGEILIDKPFES HHCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEHHHHHCCCCHH DMKPLANLCGSCRKCIESCPTGALVSPGKIDARRCISYLTVELKREFTAEESLMAGSWLF HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH GCDCCQESCPYNRERRGPPEGVFHPKEQLENLTCEEILNLSGSGFKKLFFGTPVYRIGLR HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCHHHHHHCCHHHHHHHH RLKRNARAVQENMNRTEIKP HHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AEQTDSIIRAIKKEASRLGFCAIGFSSLKPQNLAVERLNNMIDEGRHGEMDYLANRIKE CCHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH RADPSLLLSGTKTIISAAMNYYRSTTPRRPDLPRISNYALIEDYHIVLKDRLGQLLAKIQ HCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH QLYPEPLNGLITIDSAPVFEKSWAEQAGIGASANNTLLIIPAAGSYVFIGEILIDKPFES HHCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEHHHHHCCCCHH DMKPLANLCGSCRKCIESCPTGALVSPGKIDARRCISYLTVELKREFTAEESLMAGSWLF HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH GCDCCQESCPYNRERRGPPEGVFHPKEQLENLTCEEILNLSGSGFKKLFFGTPVYRIGLR HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCHHHHHHCCHHHHHHHH RLKRNARAVQENMNRTEIKP HHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]