| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356428
Identifier: 119356428
GI number: 119356428
Start: 662649
End: 663755
Strand: Direct
Name: 119356428
Synonym: Cpha266_0592
Alternate gene names: NA
Gene position: 662649-663755 (Clockwise)
Preceding gene: 119356426
Following gene: 119356431
Centisome position: 21.14
GC content: 45.98
Gene sequence:
>1107_bases ATGACTTTTTCTCAACTCCAGCGTTTTTTCTGGATCTGTTCCGGAACTCCTGAACATTTCATAGAAAAGTATCCCACCGA GCACAGTAAATATCTTGGTATCGGAGCGACCATTTTTTTTACGGCACTTTTTGCGGCTCTCTCCGGAGGGTATGCCCTTT ATTTCGTTTTTGCCGGGAATCCTTTTGCCGGGCTTTGGGGGTTGTTATTCGGATTGATGTGGGGCCTTGCCATATTCAAT CTTGACCGATATATCGTCTCAAGCATCAATAAAACATCGAAAGGGCTGAAGCAGTTTTATCAGGCCTCGCCGAGGCTTGT TTTTGCCATTCTTATTGCTCTGGTTATCGCCAGGCCTCTTGAACTCAAAATATTTGACAAGGAGATTCATGACCGTCTTA AACAGCGTTACCTGAACGATCAGAATGAGCAGATAAAAAAGGTTCAGAGCGCTTTTAATGAAAAGTATGCGCTCGAGTTA TCGCAGATAAAAAAGTATCAGGATGAGTATGATCTGTTGAGTGCCGATGTCAATCGGCTGCGCGAAGAACTGAAAGAGGA GGTGTTCGGTTCAAGAACATCCACGACCTCCGGGGTTCCGGGATATGGTTCCTATGCTAAAAACAAGGAGCTTGTTGTCG TTGCCAAACAGACAAGGCTTGAATATCTTGCCGGACAGCTTGCGGATTTGCATGCGACCATGAACCGGCAGAAAACGGCG GAGGGCATCAATAATCAGATGATGCTGAGCGAGACACTGCTTGACAAAAAAGCCGCAACTGCCGGATTTGCAGATAGGAA CTGGGCTTTGGGTGCGCTTGCCCATGCATCTGATGATGTCAGCAGCTCATCGGCAAATGCGATTTTATTTATTACGCTGC TGTTTATCGTGTTTGAATGTGCTCCGCTTATCGTTAAACTGCTGAGTGATCTCGGCCCTTCAGATGTGGAGACGAAGGAG ACCGAAAAGCGTATTATCGCTCAATTGACCAATACGGCATATTTTTCACGTAATCGCGCTATTCGTGAATACCGGATTAT GGGTTCAAAAATCGGAGGCAGGAGAGCAAAAAAATACCTGTCAAACAAACGGGGGTGGGGAAGATAG
Upstream 100 bases:
>100_bases TCGACAAAACCGCAGGGTTAACAAAAGTTTTTCGAGTGGAGCTTGATGTAACCGGTTTTTCTTGTGAACGTTATTATCGA AAAGGCAAGGAGAGTTGCGT
Downstream 100 bases:
>100_bases GTTTTCATGTCGCAGGAACTACTCTGTGATGAGACTACCGATATACTCTTTGATGTTCGGTGCGTCCGGCATGGAAAAGT GTTTTTCAAGAGCAACTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MTFSQLQRFFWICSGTPEHFIEKYPTEHSKYLGIGATIFFTALFAALSGGYALYFVFAGNPFAGLWGLLFGLMWGLAIFN LDRYIVSSINKTSKGLKQFYQASPRLVFAILIALVIARPLELKIFDKEIHDRLKQRYLNDQNEQIKKVQSAFNEKYALEL SQIKKYQDEYDLLSADVNRLREELKEEVFGSRTSTTSGVPGYGSYAKNKELVVVAKQTRLEYLAGQLADLHATMNRQKTA EGINNQMMLSETLLDKKAATAGFADRNWALGALAHASDDVSSSSANAILFITLLFIVFECAPLIVKLLSDLGPSDVETKE TEKRIIAQLTNTAYFSRNRAIREYRIMGSKIGGRRAKKYLSNKRGWGR
Sequences:
>Translated_368_residues MTFSQLQRFFWICSGTPEHFIEKYPTEHSKYLGIGATIFFTALFAALSGGYALYFVFAGNPFAGLWGLLFGLMWGLAIFN LDRYIVSSINKTSKGLKQFYQASPRLVFAILIALVIARPLELKIFDKEIHDRLKQRYLNDQNEQIKKVQSAFNEKYALEL SQIKKYQDEYDLLSADVNRLREELKEEVFGSRTSTTSGVPGYGSYAKNKELVVVAKQTRLEYLAGQLADLHATMNRQKTA EGINNQMMLSETLLDKKAATAGFADRNWALGALAHASDDVSSSSANAILFITLLFIVFECAPLIVKLLSDLGPSDVETKE TEKRIIAQLTNTAYFSRNRAIREYRIMGSKIGGRRAKKYLSNKRGWGR >Mature_367_residues TFSQLQRFFWICSGTPEHFIEKYPTEHSKYLGIGATIFFTALFAALSGGYALYFVFAGNPFAGLWGLLFGLMWGLAIFNL DRYIVSSINKTSKGLKQFYQASPRLVFAILIALVIARPLELKIFDKEIHDRLKQRYLNDQNEQIKKVQSAFNEKYALELS QIKKYQDEYDLLSADVNRLREELKEEVFGSRTSTTSGVPGYGSYAKNKELVVVAKQTRLEYLAGQLADLHATMNRQKTAE GINNQMMLSETLLDKKAATAGFADRNWALGALAHASDDVSSSSANAILFITLLFIVFECAPLIVKLLSDLGPSDVETKET EKRIIAQLTNTAYFSRNRAIREYRIMGSKIGGRRAKKYLSNKRGWGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41546; Mature: 41415
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSQLQRFFWICSGTPEHFIEKYPTEHSKYLGIGATIFFTALFAALSGGYALYFVFAGN CCHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHCCCEEEEEEECCC PFAGLWGLLFGLMWGLAIFNLDRYIVSSINKTSKGLKQFYQASPRLVFAILIALVIARPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC ELKIFDKEIHDRLKQRYLNDQNEQIKKVQSAFNEKYALELSQIKKYQDEYDLLSADVNRL CEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH REELKEEVFGSRTSTTSGVPGYGSYAKNKELVVVAKQTRLEYLAGQLADLHATMNRQKTA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH EGINNQMMLSETLLDKKAATAGFADRNWALGALAHASDDVSSSSANAILFITLLFIVFEC HCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH APLIVKLLSDLGPSDVETKETEKRIIAQLTNTAYFSRNRAIREYRIMGSKIGGRRAKKYL HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH SNKRGWGR HCCCCCCC >Mature Secondary Structure TFSQLQRFFWICSGTPEHFIEKYPTEHSKYLGIGATIFFTALFAALSGGYALYFVFAGN CHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHCCCEEEEEEECCC PFAGLWGLLFGLMWGLAIFNLDRYIVSSINKTSKGLKQFYQASPRLVFAILIALVIARPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC ELKIFDKEIHDRLKQRYLNDQNEQIKKVQSAFNEKYALELSQIKKYQDEYDLLSADVNRL CEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH REELKEEVFGSRTSTTSGVPGYGSYAKNKELVVVAKQTRLEYLAGQLADLHATMNRQKTA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH EGINNQMMLSETLLDKKAATAGFADRNWALGALAHASDDVSSSSANAILFITLLFIVFEC HCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH APLIVKLLSDLGPSDVETKETEKRIIAQLTNTAYFSRNRAIREYRIMGSKIGGRRAKKYL HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH SNKRGWGR HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA