| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is yqhT [H]
Identifier: 119356421
GI number: 119356421
Start: 655461
End: 656555
Strand: Direct
Name: yqhT [H]
Synonym: Cpha266_0585
Alternate gene names: 119356421
Gene position: 655461-656555 (Clockwise)
Preceding gene: 119356415
Following gene: 119356422
Centisome position: 20.92
GC content: 49.59
Gene sequence:
>1095_bases ATGCAACCAGATTATTTTCGTCCTTACAGACAGGCTGCCATCGAGAGCATTCTTTTGAAAATTTCGCTCCAGGCGCTTGA TTCGTGCATTGTTACCGATCTTTCCGTCATACGCTGGCTTACCGGATTCAGTGGATCAAGCGCACGGTTGCTGATTACTC AAGCACGGACCTTTCTTTTTACGGACTTTCGTTATCGTGAACAGGCTCTCTGTGAGGTGGATCTTGCCGAAATCATCATT CCGCCTGACGGTTTTATCGATGCGCTTGCTTCGGGGAACTACCCTATGGGGATGGTTGCGGGACTTCAGTCTGACGACAT CACCTGGCATGAGGCCAGCAGGCTGATCGATGCTCTCAGTGGCAAGGTGAAAATTGTTCCGGTAGGCTCGTTTTTTGATG AGTTCAGGATGATTAAAAACGGAATTGAGATCATGAAGATGCAGCAGGCAGCGGCCATTAGTGAGCAGGTGCTTGACAAG ATCATTTCCATGATCTCACCGGCCGTGACGGAACTTGATCTTGCGGCGGAAATCACCTATCAGCATAAAAAACTTGGTGC TGATAAAGATTCATTTGATCCGATTGTTGCCGGAGGCCCACGTTCGGCTATGCCTCATGCCAGACCGGCAAATCTTCACT TTGTGCCGGGAGAGTTTATCGTTCTTGATATAGGGTGTGTTTATGAGGGGTTTGCGTCCGATCAGACACGAACCGTTGCT CTTGGAACGGTATCCCGCGAAGCAAAAAAGGTCTATCACATTGTTCAGACAGCGCAGGCTCTGGGGATACGCAGCGCAGC CATCGGCATGAAAGCATGTGAATTGGATGGCCTCATTCGTCGCTATATCGATGATCACGGCTATGGGGAGGCATTTGGGC ACGGACTTGGCCACGGGGTTGGTCTTGATGTGCATGAAGAGCCTCGCATAAGTCCCAAAGGCAGGCACGAGCTGCAGGAA AATATGGTTTTTACCATAGAACCGGGAATCTATCTTCCTGGTAAATTCGGTGTACGTATTGAGGATACCGTGCTGATGAC ACCTGACGGAGCAAAACCGATGCAGCGTTTTACCAAGGAGCTGATTGAGTTGTAA
Upstream 100 bases:
>100_bases GAAAGGAATATTCGTAAATGTAAATGTAAATAATAACAAGAATCAGATGTTTTTCAAGCGGCTCGTTACGATGCCCTGAA GAAGAAAATACCTTAGGGCT
Downstream 100 bases:
>100_bases CGCGTATTGATAGATTCTTATGAGCAGTTATTGCATCGTCATCACAACCGCTCCCGACAGGAAGCTTGCTGAAAAGCTTG CGGAAGGCATTCTCGGTAAT
Product: peptidase M24
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MQPDYFRPYRQAAIESILLKISLQALDSCIVTDLSVIRWLTGFSGSSARLLITQARTFLFTDFRYREQALCEVDLAEIII PPDGFIDALASGNYPMGMVAGLQSDDITWHEASRLIDALSGKVKIVPVGSFFDEFRMIKNGIEIMKMQQAAAISEQVLDK IISMISPAVTELDLAAEITYQHKKLGADKDSFDPIVAGGPRSAMPHARPANLHFVPGEFIVLDIGCVYEGFASDQTRTVA LGTVSREAKKVYHIVQTAQALGIRSAAIGMKACELDGLIRRYIDDHGYGEAFGHGLGHGVGLDVHEEPRISPKGRHELQE NMVFTIEPGIYLPGKFGVRIEDTVLMTPDGAKPMQRFTKELIEL
Sequences:
>Translated_364_residues MQPDYFRPYRQAAIESILLKISLQALDSCIVTDLSVIRWLTGFSGSSARLLITQARTFLFTDFRYREQALCEVDLAEIII PPDGFIDALASGNYPMGMVAGLQSDDITWHEASRLIDALSGKVKIVPVGSFFDEFRMIKNGIEIMKMQQAAAISEQVLDK IISMISPAVTELDLAAEITYQHKKLGADKDSFDPIVAGGPRSAMPHARPANLHFVPGEFIVLDIGCVYEGFASDQTRTVA LGTVSREAKKVYHIVQTAQALGIRSAAIGMKACELDGLIRRYIDDHGYGEAFGHGLGHGVGLDVHEEPRISPKGRHELQE NMVFTIEPGIYLPGKFGVRIEDTVLMTPDGAKPMQRFTKELIEL >Mature_364_residues MQPDYFRPYRQAAIESILLKISLQALDSCIVTDLSVIRWLTGFSGSSARLLITQARTFLFTDFRYREQALCEVDLAEIII PPDGFIDALASGNYPMGMVAGLQSDDITWHEASRLIDALSGKVKIVPVGSFFDEFRMIKNGIEIMKMQQAAAISEQVLDK IISMISPAVTELDLAAEITYQHKKLGADKDSFDPIVAGGPRSAMPHARPANLHFVPGEFIVLDIGCVYEGFASDQTRTVA LGTVSREAKKVYHIVQTAQALGIRSAAIGMKACELDGLIRRYIDDHGYGEAFGHGLGHGVGLDVHEEPRISPKGRHELQE NMVFTIEPGIYLPGKFGVRIEDTVLMTPDGAKPMQRFTKELIEL
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI11559925, Length=259, Percent_Identity=32.046332046332, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI264681563, Length=233, Percent_Identity=31.3304721030043, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI93141226, Length=183, Percent_Identity=33.879781420765, Blast_Score=76, Evalue=4e-14, Organism=Escherichia coli, GI1788728, Length=267, Percent_Identity=38.9513108614232, Blast_Score=194, Evalue=9e-51, Organism=Escherichia coli, GI1789275, Length=249, Percent_Identity=26.5060240963855, Blast_Score=95, Evalue=6e-21, Organism=Caenorhabditis elegans, GI71989583, Length=275, Percent_Identity=24.3636363636364, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17509539, Length=362, Percent_Identity=26.2430939226519, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6321118, Length=297, Percent_Identity=26.5993265993266, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6320922, Length=264, Percent_Identity=26.1363636363636, Blast_Score=83, Evalue=6e-17, Organism=Drosophila melanogaster, GI17137632, Length=372, Percent_Identity=25, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: 3.4.-.- [C]
Molecular weight: Translated: 40126; Mature: 40126
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00491 PROLINE_PEPTIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPDYFRPYRQAAIESILLKISLQALDSCIVTDLSVIRWLTGFSGSSARLLITQARTFLF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHE TDFRYREQALCEVDLAEIIIPPDGFIDALASGNYPMGMVAGLQSDDITWHEASRLIDALS ECHHHHHHHHHHCCHHHEEECCCHHHHHHHCCCCCCHHEECCCCCCCCHHHHHHHHHHHC GKVKIVPVGSFFDEFRMIKNGIEIMKMQQAAAISEQVLDKIISMISPAVTELDLAAEITY CCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH QHKKLGADKDSFDPIVAGGPRSAMPHARPANLHFVPGEFIVLDIGCVYEGFASDQTRTVA HHHHCCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCEEEEEECHHHCCCCCCCCEEEE LGTVSREAKKVYHIVQTAQALGIRSAAIGMKACELDGLIRRYIDDHGYGEAFGHGLGHGV EEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC GLDVHEEPRISPKGRHELQENMVFTIEPGIYLPGKFGVRIEDTVLMTPDGAKPMQRFTKE CCCCCCCCCCCCCHHHHHHHCEEEEECCCEEECCCCCCEEECEEEECCCCCHHHHHHHHH LIEL HHCC >Mature Secondary Structure MQPDYFRPYRQAAIESILLKISLQALDSCIVTDLSVIRWLTGFSGSSARLLITQARTFLF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHE TDFRYREQALCEVDLAEIIIPPDGFIDALASGNYPMGMVAGLQSDDITWHEASRLIDALS ECHHHHHHHHHHCCHHHEEECCCHHHHHHHCCCCCCHHEECCCCCCCCHHHHHHHHHHHC GKVKIVPVGSFFDEFRMIKNGIEIMKMQQAAAISEQVLDKIISMISPAVTELDLAAEITY CCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH QHKKLGADKDSFDPIVAGGPRSAMPHARPANLHFVPGEFIVLDIGCVYEGFASDQTRTVA HHHHCCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCCEEEEEECHHHCCCCCCCCEEEE LGTVSREAKKVYHIVQTAQALGIRSAAIGMKACELDGLIRRYIDDHGYGEAFGHGLGHGV EEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC GLDVHEEPRISPKGRHELQENMVFTIEPGIYLPGKFGVRIEDTVLMTPDGAKPMQRFTKE CCCCCCCCCCCCCHHHHHHHCEEEEECCCEEECCCCCCEEECEEEECCCCCHHHHHHHHH LIEL HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]