Click here to switch to the map view.

The map label for this gene is recN [H]

Identifier: 119356412

GI number: 119356412

Start: 647180

End: 648886

Strand: Reverse

Name: recN [H]

Synonym: Cpha266_0576

Alternate gene names: 119356412

Gene position: 648886-647180 (Counterclockwise)

Preceding gene: 119356413

Following gene: 119356411

Centisome position: 20.71

GC content: 48.45

Gene sequence:

>1707_bases
ATGGTGACAACCCTCTATGTCCGGGATTTTGCTCTTATCGCTGAACTTACCGTAAGTTTTGCTCCCGGATTGACCATCAT
TACCGGTGAGACCGGGGCGGGCAAATCTATTCTTATCGGTGCACTGAGTCTCGTTCTCGGTGAAAGGGCCAGCGTTGATC
TTGTTCGATCGGGCGCAAACAAAGCGATCATTGAAGCTGTGCTCAAGAATCTCCCGCTTCAAAAAATCTCACCAATCCTC
ATTGGCGCTGCTATTGATATCTCTGACGAGATGATTCTGCGACGCGAAATTTCCGCATCCGGGCAATCCCGATGCTATAT
CAATGACACGCCCTGCACCGTGACGCTGCTCAAACAGATTGGAGAGCTCCTGATCGACCTGCATGGTCAGCATGAGCACC
AGTTGCTGCTCCGTACCGACACCCATGAAGCGATGCTGGATAGTTATGCACAAACCGGCTCTGAGGTTTCCGCATACAAA
GAGACGCTTAAAAGAGTCGCCACGCTAAAAAAACAGCTAACCCTCTTGCAGAAAAAAGCAGTCGAAACAAAAGAAAACAA
GGATCTTCTTACCTACCAGCTCAATGAAATCAATGCACTTGAACTGAAAGCCGGAGAGCCTGAAGCGATCGACAAGGAAA
TCATACTGCTGGAAAATGCCGAAACGCTTTTCAGTCTCTGTTCCGGCTTATGCACAGAACTCTACGACAAAGATCAGTCA
GCCTATTCAGCAATCACAACATCCGTTCACATTCTCGAAAAGCTTGCTCTTATTGATCCGCAATTTGAAAGTCACCTCGA
AGAAAACAGAACGGCTGCAAGCATCATTGAGGAACTCTACCATTTTTCTCGCCGCTATACGACCCAGGTTGAGTTCAATC
AGGAAAAACTTGACGAACTCAGGCAGCGACAGATGCAGTTGCACAGGGCACAAAAAAAGTATGGCAAAACTCTCGACGAA
CTGATCGTCTTCAGAGAGGAGCTTCTTGCAAGACTCGCCATGGAAGAGACGATTGACGATGAGATAAGCTTGATCCTCGA
GGAGATAGCTCTGGAGAAAACCACTCTTTCGATACGTGCTCAAACCCTTTCATCAAAACGACAGGCTTCCGCTCAAAAAC
TCGAGCGGATTATCCGGAAAGAACTGGGCGAACTTGGAATACCAAACGCATTTTTCAAAATCAGCATCATTCATGAGGAG
CATCCCGATGGGGAGATCACGTTAGCGGGAAAAAATTTTATTGCCTGCTCCGGTGGATATGACCGCATTGAGTTTCTTGT
GTCAGCCAATCCTGGCGAAAAACCAAAACCGCTGGTAAAAGTTGCCTCCGGTGGTGAAATTTCACGGATCATGCTTGCAT
TGAAAAGTGCGCTTGCCGCATCAACAGATCTCCCGGTACTTGTTTTTGACGAGATCGATACCGGTATAAGCGGCTCGGTT
GCTGCTGCCGTTGCCCGCAGTCTTAAACGCCTTTCGAAACTCCATCAGATCATTGCCATTACTCACTTGCCTCAGATTGC
AGCAATGGCCGATCTGCACCTTTCAGCAAGCAAATCGGTACAGCAGGAAAGAACCGTCACCGAGGTAACCGCCCTTCATG
GCGATGCCCGACTTCATGCCCTTGCATCGCTTGTCAGCGGCAAACAGCTATCGCCTTCATCGCTTAAACTTGCCGGAGAG
CTTCTTGAAGGCGCAAAATCCGTTTAG

Upstream 100 bases:

>100_bases
TGAGCAGCTTGACATACACGCATGAATCTCCCGGACAGTTTTAATCCATGGCTTTTAACATTATCTTGAAGAAGAACCGG
CACAATCAAGAACATCCGAA

Downstream 100 bases:

>100_bases
AAAATGAGAAACTTTGCATTATAATGCGTACCATGTCAAGTTTCTGATTAACAAGGGATACCATTATGTCCACACGATAC
ATTGCAGGATCGGCCGTTGC

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MVTTLYVRDFALIAELTVSFAPGLTIITGETGAGKSILIGALSLVLGERASVDLVRSGANKAIIEAVLKNLPLQKISPIL
IGAAIDISDEMILRREISASGQSRCYINDTPCTVTLLKQIGELLIDLHGQHEHQLLLRTDTHEAMLDSYAQTGSEVSAYK
ETLKRVATLKKQLTLLQKKAVETKENKDLLTYQLNEINALELKAGEPEAIDKEIILLENAETLFSLCSGLCTELYDKDQS
AYSAITTSVHILEKLALIDPQFESHLEENRTAASIIEELYHFSRRYTTQVEFNQEKLDELRQRQMQLHRAQKKYGKTLDE
LIVFREELLARLAMEETIDDEISLILEEIALEKTTLSIRAQTLSSKRQASAQKLERIIRKELGELGIPNAFFKISIIHEE
HPDGEITLAGKNFIACSGGYDRIEFLVSANPGEKPKPLVKVASGGEISRIMLALKSALAASTDLPVLVFDEIDTGISGSV
AAAVARSLKRLSKLHQIIAITHLPQIAAMADLHLSASKSVQQERTVTEVTALHGDARLHALASLVSGKQLSPSSLKLAGE
LLEGAKSV

Sequences:

>Translated_568_residues
MVTTLYVRDFALIAELTVSFAPGLTIITGETGAGKSILIGALSLVLGERASVDLVRSGANKAIIEAVLKNLPLQKISPIL
IGAAIDISDEMILRREISASGQSRCYINDTPCTVTLLKQIGELLIDLHGQHEHQLLLRTDTHEAMLDSYAQTGSEVSAYK
ETLKRVATLKKQLTLLQKKAVETKENKDLLTYQLNEINALELKAGEPEAIDKEIILLENAETLFSLCSGLCTELYDKDQS
AYSAITTSVHILEKLALIDPQFESHLEENRTAASIIEELYHFSRRYTTQVEFNQEKLDELRQRQMQLHRAQKKYGKTLDE
LIVFREELLARLAMEETIDDEISLILEEIALEKTTLSIRAQTLSSKRQASAQKLERIIRKELGELGIPNAFFKISIIHEE
HPDGEITLAGKNFIACSGGYDRIEFLVSANPGEKPKPLVKVASGGEISRIMLALKSALAASTDLPVLVFDEIDTGISGSV
AAAVARSLKRLSKLHQIIAITHLPQIAAMADLHLSASKSVQQERTVTEVTALHGDARLHALASLVSGKQLSPSSLKLAGE
LLEGAKSV
>Mature_568_residues
MVTTLYVRDFALIAELTVSFAPGLTIITGETGAGKSILIGALSLVLGERASVDLVRSGANKAIIEAVLKNLPLQKISPIL
IGAAIDISDEMILRREISASGQSRCYINDTPCTVTLLKQIGELLIDLHGQHEHQLLLRTDTHEAMLDSYAQTGSEVSAYK
ETLKRVATLKKQLTLLQKKAVETKENKDLLTYQLNEINALELKAGEPEAIDKEIILLENAETLFSLCSGLCTELYDKDQS
AYSAITTSVHILEKLALIDPQFESHLEENRTAASIIEELYHFSRRYTTQVEFNQEKLDELRQRQMQLHRAQKKYGKTLDE
LIVFREELLARLAMEETIDDEISLILEEIALEKTTLSIRAQTLSSKRQASAQKLERIIRKELGELGIPNAFFKISIIHEE
HPDGEITLAGKNFIACSGGYDRIEFLVSANPGEKPKPLVKVASGGEISRIMLALKSALAASTDLPVLVFDEIDTGISGSV
AAAVARSLKRLSKLHQIIAITHLPQIAAMADLHLSASKSVQQERTVTEVTALHGDARLHALASLVSGKQLSPSSLKLAGE
LLEGAKSV

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=572, Percent_Identity=34.6153846153846, Blast_Score=284, Evalue=1e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62335; Mature: 62335

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTTLYVRDFALIAELTVSFAPGLTIITGETGAGKSILIGALSLVLGERASVDLVRSGAN
CEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
KAIIEAVLKNLPLQKISPILIGAAIDISDEMILRREISASGQSRCYINDTPCTVTLLKQI
HHHHHHHHHHCCHHHCCHHHEEEEECCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHH
GELLIDLHGQHEHQLLLRTDTHEAMLDSYAQTGSEVSAYKETLKRVATLKKQLTLLQKKA
HHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VETKENKDLLTYQLNEINALELKAGEPEAIDKEIILLENAETLFSLCSGLCTELYDKDQS
HCCCCCCCEEEEEECCCCEEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCHH
AYSAITTSVHILEKLALIDPQFESHLEENRTAASIIEELYHFSRRYTTQVEFNQEKLDEL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEECHHHHHHH
RQRQMQLHRAQKKYGKTLDELIVFREELLARLAMEETIDDEISLILEEIALEKTTLSIRA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTLSSKRQASAQKLERIIRKELGELGIPNAFFKISIIHEEHPDGEITLAGKNFIACSGGY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCEEEECCCC
DRIEFLVSANPGEKPKPLVKVASGGEISRIMLALKSALAASTDLPVLVFDEIDTGISGSV
CEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHH
AAAVARSLKRLSKLHQIIAITHLPQIAAMADLHLSASKSVQQERTVTEVTALHGDARLHA
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LASLVSGKQLSPSSLKLAGELLEGAKSV
HHHHHCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVTTLYVRDFALIAELTVSFAPGLTIITGETGAGKSILIGALSLVLGERASVDLVRSGAN
CEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
KAIIEAVLKNLPLQKISPILIGAAIDISDEMILRREISASGQSRCYINDTPCTVTLLKQI
HHHHHHHHHHCCHHHCCHHHEEEEECCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHH
GELLIDLHGQHEHQLLLRTDTHEAMLDSYAQTGSEVSAYKETLKRVATLKKQLTLLQKKA
HHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VETKENKDLLTYQLNEINALELKAGEPEAIDKEIILLENAETLFSLCSGLCTELYDKDQS
HCCCCCCCEEEEEECCCCEEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCHH
AYSAITTSVHILEKLALIDPQFESHLEENRTAASIIEELYHFSRRYTTQVEFNQEKLDEL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEECHHHHHHH
RQRQMQLHRAQKKYGKTLDELIVFREELLARLAMEETIDDEISLILEEIALEKTTLSIRA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTLSSKRQASAQKLERIIRKELGELGIPNAFFKISIIHEEHPDGEITLAGKNFIACSGGY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCEEEECCCC
DRIEFLVSANPGEKPKPLVKVASGGEISRIMLALKSALAASTDLPVLVFDEIDTGISGSV
CEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHH
AAAVARSLKRLSKLHQIIAITHLPQIAAMADLHLSASKSVQQERTVTEVTALHGDARLHA
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LASLVSGKQLSPSSLKLAGELLEGAKSV
HHHHHCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]