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The map label for this gene is pscC [H]

Identifier: 119356396

GI number: 119356396

Start: 628707

End: 629348

Strand: Direct

Name: pscC [H]

Synonym: Cpha266_0560

Alternate gene names: 119356396

Gene position: 628707-629348 (Clockwise)

Preceding gene: 119356392

Following gene: 119356398

Centisome position: 20.06

GC content: 47.82

Gene sequence:

>642_bases
ATGGACAACAAATCAAACGGGAAGCTTATTGCACTTGCAATCGGCGGGGCTGTCTTAATGGGGGCTTTGTTTTTTGGGGT
GTCATTTTTAACCGGTTACAAGGTGCCGGCTGAGAACATCTCGAACATTTTAACACCTTTGAAGTCGTTCACTGGATGGT
TTTCGCTGATTTTCTTCGCTTCGCTGATCATCATGACTCTGGGAAAAATGTCGTCACGCATCAGTGATAAATGGTTTCTC
AGCTTTCCTCTCGGCGCCCTCGGTATTGTTGCCCTCATGTTTGCAATTCTCTGGATCAGGCCTTCCGGCTTTCTTCTTCC
GACAACAGGAAGAACCACCACGCTTGACGGAAAATATATTCGCAGCGTTGGCGAACTGAAAGCTTTTCTTGACAAACCGG
CTGAAGGCAGCAAGGTTCCCAAGGCTCCTGCCGGATTTGATTTTGATGGAGCGAAGGCTCTTGCCGATGGGCGCTGCAAC
AAGTGTCATACGCTCGATTCTGTTCAGGATGCTCTGAGAACGAAATTCAAGAAAACCGGAAAGGTTGACGTTGTCGTCAA
TCGCATGCAGGCATATCCGGGTTCAGGCATTACGGTTGATGAAGCAAATACGATCATGATCTACCTTGTCGAGAAGTACT
GA

Upstream 100 bases:

>100_bases
GTCAAGGTTTTTGTGGTTTATGTTTGTCGGCTTTACTATTAATGCTTATCTTATTCAATAATTTTTCTACAGGCCGCTAA
CACCTAATTCACTACCTGTC

Downstream 100 bases:

>100_bases
GCGTATCCGATCCTGCCGGTTGCAAGTTGCAAAAGCCTCAGCGTTCTGCTGAGGCTTTTGCTTTTTTGGCTTGTTGCGGT
GGAGCGCTCGGGAAAATTCC

Product: photosystem P840 reaction center cytochrome c-551

Products: NA

Alternate protein names: Photosystem P840 reaction center cytochrome c-551 [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MDNKSNGKLIALAIGGAVLMGALFFGVSFLTGYKVPAENISNILTPLKSFTGWFSLIFFASLIIMTLGKMSSRISDKWFL
SFPLGALGIVALMFAILWIRPSGFLLPTTGRTTTLDGKYIRSVGELKAFLDKPAEGSKVPKAPAGFDFDGAKALADGRCN
KCHTLDSVQDALRTKFKKTGKVDVVVNRMQAYPGSGITVDEANTIMIYLVEKY

Sequences:

>Translated_213_residues
MDNKSNGKLIALAIGGAVLMGALFFGVSFLTGYKVPAENISNILTPLKSFTGWFSLIFFASLIIMTLGKMSSRISDKWFL
SFPLGALGIVALMFAILWIRPSGFLLPTTGRTTTLDGKYIRSVGELKAFLDKPAEGSKVPKAPAGFDFDGAKALADGRCN
KCHTLDSVQDALRTKFKKTGKVDVVVNRMQAYPGSGITVDEANTIMIYLVEKY
>Mature_213_residues
MDNKSNGKLIALAIGGAVLMGALFFGVSFLTGYKVPAENISNILTPLKSFTGWFSLIFFASLIIMTLGKMSSRISDKWFL
SFPLGALGIVALMFAILWIRPSGFLLPTTGRTTTLDGKYIRSVGELKAFLDKPAEGSKVPKAPAGFDFDGAKALADGRCN
KCHTLDSVQDALRTKFKKTGKVDVVVNRMQAYPGSGITVDEANTIMIYLVEKY

Specific function: Monoheme cytochrome which is the immediate electron donor to P840 of the photosynthetic reaction center complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016203
- InterPro:   IPR009056
- InterPro:   IPR019604 [H]

Pfam domain/function: PF10643 Cytochrome-c551 [H]

EC number: NA

Molecular weight: Translated: 23075; Mature: 23075

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKSNGKLIALAIGGAVLMGALFFGVSFLTGYKVPAENISNILTPLKSFTGWFSLIFFA
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLIIMTLGKMSSRISDKWFLSFPLGALGIVALMFAILWIRPSGFLLPTTGRTTTLDGKYI
HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECCHHHH
RSVGELKAFLDKPAEGSKVPKAPAGFDFDGAKALADGRCNKCHTLDSVQDALRTKFKKTG
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
KVDVVVNRMQAYPGSGITVDEANTIMIYLVEKY
CHHHHHHHHHCCCCCCEEECCCCEEEEEEEECC
>Mature Secondary Structure
MDNKSNGKLIALAIGGAVLMGALFFGVSFLTGYKVPAENISNILTPLKSFTGWFSLIFFA
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLIIMTLGKMSSRISDKWFLSFPLGALGIVALMFAILWIRPSGFLLPTTGRTTTLDGKYI
HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECCHHHH
RSVGELKAFLDKPAEGSKVPKAPAGFDFDGAKALADGRCNKCHTLDSVQDALRTKFKKTG
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
KVDVVVNRMQAYPGSGITVDEANTIMIYLVEKY
CHHHHHHHHHCCCCCCEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9230061; 10976061; 12093901 [H]