| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356385
Identifier: 119356385
GI number: 119356385
Start: 609777
End: 610328
Strand: Reverse
Name: 119356385
Synonym: Cpha266_0549
Alternate gene names: NA
Gene position: 610328-609777 (Counterclockwise)
Preceding gene: 119356386
Following gene: 119356380
Centisome position: 19.48
GC content: 45.11
Gene sequence:
>552_bases ATGTTTATAACAATACATGCGCGACTTCTGCTCGTTCCGGTTATTGCTCTTTTCATACTCCAGGGATGCGGAAACCCATC TCAAAACGGTAAAGAGGAAAAACTGGCAGTTCAGCAAGCACAACAAATAACTATTATCGAGCCCTCTCATCTTGTGACGC AACAGGATGCCGAAAAAATTCTCGGTGAACCGGTAAAGAAGGCTGTCAGAACTGAAAAGCCCATTGTTGGTCTGAAACTC TGCATGTACAATCCGGTAAACGAGCAGTCAACCTCCTTTCTTCAGATAACCCTTACCCAAAACGGCTTTATGCTCCCTGA AGGAACCTCGACAGCCTCGATTTACAACCGCCTGAAAAAGAACTTTGAAAGCACCAGAACCGATATCAGGGATCTTGGTG ACGACGCCTTTATTGCAACCGGCGGACTGTATATTCTCAAAGAGAACTGCTATATCATGATAGCCGCTGGAAATATCAAT AGCGAAGCAACCCGAACGATACTCATGGATGCAGGCAAAACAGCGCTCGATAACCTTTCGCGATTGAAATAA
Upstream 100 bases:
>100_bases CCCCGTACAGAACAAGAAATATCAGCCGGCAATACTTGTGACAATTTTTGAATAACGGTAGATTGATGCCTGATATATTG TACAATCAACAGGAAAACCT
Downstream 100 bases:
>100_bases CAGGTACAAGCAACAGGAAAAGAAAGAAAAAAAAGCAATCAATGGAACAGAGAAAACTCGGTTCGCAGGGATTAACCGTA TCGGCACAAGGTCTGGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MFITIHARLLLVPVIALFILQGCGNPSQNGKEEKLAVQQAQQITIIEPSHLVTQQDAEKILGEPVKKAVRTEKPIVGLKL CMYNPVNEQSTSFLQITLTQNGFMLPEGTSTASIYNRLKKNFESTRTDIRDLGDDAFIATGGLYILKENCYIMIAAGNIN SEATRTILMDAGKTALDNLSRLK
Sequences:
>Translated_183_residues MFITIHARLLLVPVIALFILQGCGNPSQNGKEEKLAVQQAQQITIIEPSHLVTQQDAEKILGEPVKKAVRTEKPIVGLKL CMYNPVNEQSTSFLQITLTQNGFMLPEGTSTASIYNRLKKNFESTRTDIRDLGDDAFIATGGLYILKENCYIMIAAGNIN SEATRTILMDAGKTALDNLSRLK >Mature_183_residues MFITIHARLLLVPVIALFILQGCGNPSQNGKEEKLAVQQAQQITIIEPSHLVTQQDAEKILGEPVKKAVRTEKPIVGLKL CMYNPVNEQSTSFLQITLTQNGFMLPEGTSTASIYNRLKKNFESTRTDIRDLGDDAFIATGGLYILKENCYIMIAAGNIN SEATRTILMDAGKTALDNLSRLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20182; Mature: 20182
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFITIHARLLLVPVIALFILQGCGNPSQNGKEEKLAVQQAQQITIIEPSHLVTQQDAEKI CEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEEEECCHHHHHHHHHHHH LGEPVKKAVRTEKPIVGLKLCMYNPVNEQSTSFLQITLTQNGFMLPEGTSTASIYNRLKK HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCEECCCCCCHHHHHHHHHH NFESTRTDIRDLGDDAFIATGGLYILKENCYIMIAAGNINSEATRTILMDAGKTALDNLS HHHHHHHHHHHCCCCEEEECCCEEEEECCCEEEEEECCCCCHHHEEEEEECCCHHHHHHH RLK HCC >Mature Secondary Structure MFITIHARLLLVPVIALFILQGCGNPSQNGKEEKLAVQQAQQITIIEPSHLVTQQDAEKI CEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEEEECCHHHHHHHHHHHH LGEPVKKAVRTEKPIVGLKLCMYNPVNEQSTSFLQITLTQNGFMLPEGTSTASIYNRLKK HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCEECCCCCCHHHHHHHHHH NFESTRTDIRDLGDDAFIATGGLYILKENCYIMIAAGNINSEATRTILMDAGKTALDNLS HHHHHHHHHHHCCCCEEEECCCEEEEECCCEEEEEECCCCCHHHEEEEEECCCHHHHHHH RLK HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA