Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119356379

Identifier: 119356379

GI number: 119356379

Start: 596919

End: 598754

Strand: Reverse

Name: 119356379

Synonym: Cpha266_0542

Alternate gene names: NA

Gene position: 598754-596919 (Counterclockwise)

Preceding gene: 119356380

Following gene: 119356378

Centisome position: 19.11

GC content: 46.9

Gene sequence:

>1836_bases
ATGCAAGCAAAATTTCTGACGTTGTGCTGTATACTTCTTTTTTCGATCTGTCCAGCCGACGGCGAAGCCGCATCTCCGAT
TAAAGCTGTTACAGCCCCGCCACCGGCTCCCGTTCATGCACAAAAACCTGAAGAAACGCTCCGCTCCGGTAAAAATCTCT
TCAGAATAAAAGAGTACAGTAAAGCACAGACAATCTTTGAAACACTCCTCAAAGAGAACGGCAACCCTCAATCCAAAATC
CGTCATAGCACTCTGCTCTGGCTCTCAAAAAGCCTTTTCATGCAAAAACAGCCTGAAAAAGCAGCGCAACTCCTTGAAGA
ACTCCTGAAAAACCCTTCGATAAACGGCATAGATCCGGCAACGATCGTTGAAGCTCATTATGATCTTGCCGCATGCAGAT
ACAAACTCGGTACACCATTGTCGGCAGCGCTTGATTTTCTCAATGTTGCGCTTTCTGCAACACCCGCCGGCATGCAGGCA
ATGCAGGAGCAAGCCCTGATCAATACAAAACTCATTGCATGCACAAGCCTCGACGGCAATGCGATTGCATCGCTTGAACG
GATTGCCAGAACACCCGATCTTCAGACATTCCTGCTGAACGCAAGAATGCAGAACTATCTTCAAAAGAATAACACAAACA
CCTTCCTGAGCACAATCCCGCTTGTTGATCAACTCCTTCGCTCTCCGTCAATAAGCCGGGATAGCCAACAACTGATGGAA
TCCCTTAAAAAGCAGGCAGCGCAGCTTTCCCTTGCGACATTCAAGGAAAGAAAAATTGGTATTCTGCTTCCTGTAGAAAT
TCCTGTCTATCGCGCAGCGGAGCGATCTTCGGCAAGCAATCAGATGTTCAAGGGTATCCATCAGAGACTCCTTCGCTACC
AGATGGAGCGCCCTGACATCCTGATCAGTTATTCCGTCGCCAAACCATCCGAAGGTGCAGAAAACGACCTGTTCGGCAGC
ACGAAACAGCTTCTTGAAACATCCTCTCCTCTCGTCCTCATTGGCCCGATGTTCAGCAACGATGCCATTGAGGCTGCACG
GGCAGCTAAAAACTCGAAAGTGCCTCTTATCACTCCGACAGCAACCGATAACCTCGTTACCGACAATAATCCATGGGCTT
TTCAGTTAAACCCCACCCATGAAGAACGCGGGCGCATTGCGGCAAGGGAGCTGCTGAAAACAGGTAAACCGCAACGCGCA
GCAGCAATAGCGGAAAAAACAGATAATCTGGAAGAGATGGCAAAAGGATTTCTTGACGAATTAAAACAAGCAGGAAGCAA
ATCCGTTATCTATGCATCGTTCAGTGGAAAACCCGAAGATCAGAACAATCTTGCCGAGTCGCTCGGTACCCCTCCAGGAA
CGTTGCTTGACGCACTTTATCTCCCCATGGATTCGCCTGAAACCATTGAAACGACTCTGCTTTTTCTTGAAAAAAACAGA
ATCGGCTACAAGCGGCTTCTCGGTTCAGGGGTCTGGTCAGACCGCAAGGTTGTTGAACGATTCCGAAAAAAGATTTCAAA
AGGAATTACCTTTTTCAACGACTATTCTTTTAGCGGATCAGCGATCGAAACGGTCGAAACAGCAAAGAGTCATCAAAAGT
TGTGGAACACAGCACTTTCTTCTAATTTCTGGTATGGCTATGATACTATGGATTTTCTCCTGCATACCATCGACAAAAGC
CCTGATCTCAAGCACAGCGAACTCGCAAAAGCCATTCGAAATGCACCTGTATACAATGCCCATTATACAAAATACAGGTT
TGAAGGAAACAATGTGAATCATTACCTCAACGTCATATTGATTCAACCTGATACGGCCAGACAACCGATCAACTGA

Upstream 100 bases:

>100_bases
TATATTCAACAAGCAAAGCATCATTGCCGGCAATCATGCGACGCATCCGCTTCTTCTTGAAAAAGCACTGAAACATTTCA
AGCCATAGACCATATCAACC

Downstream 100 bases:

>100_bases
CAAGCAACAACCATGACTTGAAAGCAAAGCCATTCTTTATTATCTTTAAAGTCTATAATTTTCTGCTCTTGCAGTTTGCT
TTCATTTCCTGTCTAACATT

Product: ABC-type branched-chain amino acid transport systems periplasmic component-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MQAKFLTLCCILLFSICPADGEAASPIKAVTAPPPAPVHAQKPEETLRSGKNLFRIKEYSKAQTIFETLLKENGNPQSKI
RHSTLLWLSKSLFMQKQPEKAAQLLEELLKNPSINGIDPATIVEAHYDLAACRYKLGTPLSAALDFLNVALSATPAGMQA
MQEQALINTKLIACTSLDGNAIASLERIARTPDLQTFLLNARMQNYLQKNNTNTFLSTIPLVDQLLRSPSISRDSQQLME
SLKKQAAQLSLATFKERKIGILLPVEIPVYRAAERSSASNQMFKGIHQRLLRYQMERPDILISYSVAKPSEGAENDLFGS
TKQLLETSSPLVLIGPMFSNDAIEAARAAKNSKVPLITPTATDNLVTDNNPWAFQLNPTHEERGRIAARELLKTGKPQRA
AAIAEKTDNLEEMAKGFLDELKQAGSKSVIYASFSGKPEDQNNLAESLGTPPGTLLDALYLPMDSPETIETTLLFLEKNR
IGYKRLLGSGVWSDRKVVERFRKKISKGITFFNDYSFSGSAIETVETAKSHQKLWNTALSSNFWYGYDTMDFLLHTIDKS
PDLKHSELAKAIRNAPVYNAHYTKYRFEGNNVNHYLNVILIQPDTARQPIN

Sequences:

>Translated_611_residues
MQAKFLTLCCILLFSICPADGEAASPIKAVTAPPPAPVHAQKPEETLRSGKNLFRIKEYSKAQTIFETLLKENGNPQSKI
RHSTLLWLSKSLFMQKQPEKAAQLLEELLKNPSINGIDPATIVEAHYDLAACRYKLGTPLSAALDFLNVALSATPAGMQA
MQEQALINTKLIACTSLDGNAIASLERIARTPDLQTFLLNARMQNYLQKNNTNTFLSTIPLVDQLLRSPSISRDSQQLME
SLKKQAAQLSLATFKERKIGILLPVEIPVYRAAERSSASNQMFKGIHQRLLRYQMERPDILISYSVAKPSEGAENDLFGS
TKQLLETSSPLVLIGPMFSNDAIEAARAAKNSKVPLITPTATDNLVTDNNPWAFQLNPTHEERGRIAARELLKTGKPQRA
AAIAEKTDNLEEMAKGFLDELKQAGSKSVIYASFSGKPEDQNNLAESLGTPPGTLLDALYLPMDSPETIETTLLFLEKNR
IGYKRLLGSGVWSDRKVVERFRKKISKGITFFNDYSFSGSAIETVETAKSHQKLWNTALSSNFWYGYDTMDFLLHTIDKS
PDLKHSELAKAIRNAPVYNAHYTKYRFEGNNVNHYLNVILIQPDTARQPIN
>Mature_611_residues
MQAKFLTLCCILLFSICPADGEAASPIKAVTAPPPAPVHAQKPEETLRSGKNLFRIKEYSKAQTIFETLLKENGNPQSKI
RHSTLLWLSKSLFMQKQPEKAAQLLEELLKNPSINGIDPATIVEAHYDLAACRYKLGTPLSAALDFLNVALSATPAGMQA
MQEQALINTKLIACTSLDGNAIASLERIARTPDLQTFLLNARMQNYLQKNNTNTFLSTIPLVDQLLRSPSISRDSQQLME
SLKKQAAQLSLATFKERKIGILLPVEIPVYRAAERSSASNQMFKGIHQRLLRYQMERPDILISYSVAKPSEGAENDLFGS
TKQLLETSSPLVLIGPMFSNDAIEAARAAKNSKVPLITPTATDNLVTDNNPWAFQLNPTHEERGRIAARELLKTGKPQRA
AAIAEKTDNLEEMAKGFLDELKQAGSKSVIYASFSGKPEDQNNLAESLGTPPGTLLDALYLPMDSPETIETTLLFLEKNR
IGYKRLLGSGVWSDRKVVERFRKKISKGITFFNDYSFSGSAIETVETAKSHQKLWNTALSSNFWYGYDTMDFLLHTIDKS
PDLKHSELAKAIRNAPVYNAHYTKYRFEGNNVNHYLNVILIQPDTARQPIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67944; Mature: 67944

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAKFLTLCCILLFSICPADGEAASPIKAVTAPPPAPVHAQKPEETLRSGKNLFRIKEYS
CCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCEEEHHHHH
KAQTIFETLLKENGNPQSKIRHSTLLWLSKSLFMQKQPEKAAQLLEELLKNPSINGIDPA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHH
TIVEAHYDLAACRYKLGTPLSAALDFLNVALSATPAGMQAMQEQALINTKLIACTSLDGN
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCH
AIASLERIARTPDLQTFLLNARMQNYLQKNNTNTFLSTIPLVDQLLRSPSISRDSQQLME
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
SLKKQAAQLSLATFKERKIGILLPVEIPVYRAAERSSASNQMFKGIHQRLLRYQMERPDI
HHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCE
LISYSVAKPSEGAENDLFGSTKQLLETSSPLVLIGPMFSNDAIEAARAAKNSKVPLITPT
EEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCCEECCC
ATDNLVTDNNPWAFQLNPTHEERGRIAARELLKTGKPQRAAAIAEKTDNLEEMAKGFLDE
CCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHH
LKQAGSKSVIYASFSGKPEDQNNLAESLGTPPGTLLDALYLPMDSPETIETTLLFLEKNR
HHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHEEEEEECCC
IGYKRLLGSGVWSDRKVVERFRKKISKGITFFNDYSFSGSAIETVETAKSHQKLWNTALS
CHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
SNFWYGYDTMDFLLHTIDKSPDLKHSELAKAIRNAPVYNAHYTKYRFEGNNVNHYLNVIL
CCCEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEE
IQPDTARQPIN
ECCCCCCCCCC
>Mature Secondary Structure
MQAKFLTLCCILLFSICPADGEAASPIKAVTAPPPAPVHAQKPEETLRSGKNLFRIKEYS
CCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCEEEHHHHH
KAQTIFETLLKENGNPQSKIRHSTLLWLSKSLFMQKQPEKAAQLLEELLKNPSINGIDPA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHH
TIVEAHYDLAACRYKLGTPLSAALDFLNVALSATPAGMQAMQEQALINTKLIACTSLDGN
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCH
AIASLERIARTPDLQTFLLNARMQNYLQKNNTNTFLSTIPLVDQLLRSPSISRDSQQLME
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
SLKKQAAQLSLATFKERKIGILLPVEIPVYRAAERSSASNQMFKGIHQRLLRYQMERPDI
HHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCE
LISYSVAKPSEGAENDLFGSTKQLLETSSPLVLIGPMFSNDAIEAARAAKNSKVPLITPT
EEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCCEECCC
ATDNLVTDNNPWAFQLNPTHEERGRIAARELLKTGKPQRAAAIAEKTDNLEEMAKGFLDE
CCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHH
LKQAGSKSVIYASFSGKPEDQNNLAESLGTPPGTLLDALYLPMDSPETIETTLLFLEKNR
HHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHEEEEEECCC
IGYKRLLGSGVWSDRKVVERFRKKISKGITFFNDYSFSGSAIETVETAKSHQKLWNTALS
CHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
SNFWYGYDTMDFLLHTIDKSPDLKHSELAKAIRNAPVYNAHYTKYRFEGNNVNHYLNVIL
CCCEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEE
IQPDTARQPIN
ECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA