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The map label for this gene is yebA [C]

Identifier: 119356372

GI number: 119356372

Start: 588391

End: 589134

Strand: Reverse

Name: yebA [C]

Synonym: Cpha266_0535

Alternate gene names: 119356372

Gene position: 589134-588391 (Counterclockwise)

Preceding gene: 119356373

Following gene: 119356371

Centisome position: 18.8

GC content: 44.22

Gene sequence:

>744_bases
ATGTTTTCAAAAAACCGGTTTTTCCTTCTGTCTGAACATGGCAGAAATTTGAAAAAGGCTGGCAAATCAGCTTTTTTTGC
AGGTTTAGTTTTTATTTGCTCCTCTTTTCCCTCTTCCCCTCTTATTTCTTCAGCAATTGCCGAAGAAAAACCATCCGCAT
CAGCCGAAGGTCTTCTTGCAAGCACTGAAGAGATGATCGAGCACCTGATTCTCCAGATTGACAGGCAAAGCGACAACAGC
CCTGAAATCAAGGAAAATTATCAGGAATCCGGAAAAAACTTCTTTTCATCCATTCCAAACATCAAACCGGTTCCAGGCGC
AATCACGAGTCATTTCGGACAGAGATTCCATCCGGTTTACAACACCATGCTGTTTCATGCCGGGGTAGATTTCTCGGCAG
CTATTGGAACAAGGGTACAGGCGACAGGATCCGGAGTCATAGCATTTTCGGGGTATGATAAAGGATATGGTGAGAAGGTC
GTTATCAATCACGGATATGGTTTCGAAACGGTTTATGCCCATCTGTCAAAATCGCTGGTTCGTCAGGGACAACGAGTCAA
CCGTGGCGAAATTATAGCTCTGACCGGCAATTCCGGAGTATCGACAGGACCCCATCTTCATTATGAAGTCCGCAAACACA
ACGTCAAAGTAAATCCGACTGCTTACTTCTTTAATGGTGGCAATCCATCCAAATTCATTACGAACGAAACTATTTCTGCA
GAAGCAAACGGCAGTAACTCGTAA

Upstream 100 bases:

>100_bases
GGCTCGAAGCCCATTAACAATTGCCTTATAAGGAAAAGTTTATTTATATTCGTGGAGTGTATAATCTTCTTACGAGTTCA
GCCAATCAATCAGACACCGC

Downstream 100 bases:

>100_bases
CACTAACAACCGAATAATTCAAGACAAACAGTATGTACTGGAACCTGGATCTTGCTCGTTATATAGCTGATGCACCATGG
CCATTAACAAAGGATGAACT

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MFSKNRFFLLSEHGRNLKKAGKSAFFAGLVFICSSFPSSPLISSAIAEEKPSASAEGLLASTEEMIEHLILQIDRQSDNS
PEIKENYQESGKNFFSSIPNIKPVPGAITSHFGQRFHPVYNTMLFHAGVDFSAAIGTRVQATGSGVIAFSGYDKGYGEKV
VINHGYGFETVYAHLSKSLVRQGQRVNRGEIIALTGNSGVSTGPHLHYEVRKHNVKVNPTAYFFNGGNPSKFITNETISA
EANGSNS

Sequences:

>Translated_247_residues
MFSKNRFFLLSEHGRNLKKAGKSAFFAGLVFICSSFPSSPLISSAIAEEKPSASAEGLLASTEEMIEHLILQIDRQSDNS
PEIKENYQESGKNFFSSIPNIKPVPGAITSHFGQRFHPVYNTMLFHAGVDFSAAIGTRVQATGSGVIAFSGYDKGYGEKV
VINHGYGFETVYAHLSKSLVRQGQRVNRGEIIALTGNSGVSTGPHLHYEVRKHNVKVNPTAYFFNGGNPSKFITNETISA
EANGSNS
>Mature_247_residues
MFSKNRFFLLSEHGRNLKKAGKSAFFAGLVFICSSFPSSPLISSAIAEEKPSASAEGLLASTEEMIEHLILQIDRQSDNS
PEIKENYQESGKNFFSSIPNIKPVPGAITSHFGQRFHPVYNTMLFHAGVDFSAAIGTRVQATGSGVIAFSGYDKGYGEKV
VINHGYGFETVYAHLSKSLVRQGQRVNRGEIIALTGNSGVSTGPHLHYEVRKHNVKVNPTAYFFNGGNPSKFITNETISA
EANGSNS

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=113, Percent_Identity=46.0176991150442, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87082297, Length=121, Percent_Identity=32.2314049586777, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789099, Length=97, Percent_Identity=35.0515463917526, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI87082174, Length=97, Percent_Identity=34.020618556701, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 26824; Mature: 26824

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSKNRFFLLSEHGRNLKKAGKSAFFAGLVFICSSFPSSPLISSAIAEEKPSASAEGLLA
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHH
STEEMIEHLILQIDRQSDNSPEIKENYQESGKNFFSSIPNIKPVPGAITSHFGQRFHPVY
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
NTMLFHAGVDFSAAIGTRVQATGSGVIAFSGYDKGYGEKVVINHGYGFETVYAHLSKSLV
HHHHHHCCCCHHHHHCCEEEECCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHH
RQGQRVNRGEIIALTGNSGVSTGPHLHYEVRKHNVKVNPTAYFFNGGNPSKFITNETISA
HCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECEEEECCEEEEEECCCCCCEEECCEEEE
EANGSNS
CCCCCCC
>Mature Secondary Structure
MFSKNRFFLLSEHGRNLKKAGKSAFFAGLVFICSSFPSSPLISSAIAEEKPSASAEGLLA
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHH
STEEMIEHLILQIDRQSDNSPEIKENYQESGKNFFSSIPNIKPVPGAITSHFGQRFHPVY
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
NTMLFHAGVDFSAAIGTRVQATGSGVIAFSGYDKGYGEKVVINHGYGFETVYAHLSKSLV
HHHHHHCCCCHHHHHCCEEEECCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHH
RQGQRVNRGEIIALTGNSGVSTGPHLHYEVRKHNVKVNPTAYFFNGGNPSKFITNETISA
HCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECEEEECCEEEEEECCCCCCEEECCEEEE
EANGSNS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]