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The map label for this gene is rpe [H]

Identifier: 119356369

GI number: 119356369

Start: 585166

End: 585831

Strand: Reverse

Name: rpe [H]

Synonym: Cpha266_0532

Alternate gene names: 119356369

Gene position: 585831-585166 (Counterclockwise)

Preceding gene: 119356370

Following gene: 119356364

Centisome position: 18.69

GC content: 47.75

Gene sequence:

>666_bases
ATGCCGGGAAAAACAACTCTTCTTGCTCCATCAATTCTTTCCGCTGACTTCACAGCACTCGCATCATCCATTGCTGTTGC
AGAAAATGCCGGAGCGGACTGGATTCATTGTGATATCATGGACGGGGTTTTCGTGCCGAATATAACGTTTGGACCGTTTA
TCGTGCAGGCTATTTCACGGTGTACAACCATGACAATCGACACCCATTTGATGATCATCGATCCCGACAGGTTCATTGCG
GATTTCATCAAAGCCGGATCCAACCAGGTCACCGTTCATCAGGAAGCCTGTCCCCATCTTCACCGAACCATACAACTCAT
TAAAAGCCTTGGAGCAAAAGCCGGGGTTTCCATAAATCCAGGTACGACACTTGCGACACTTGAATCAATTCTTCCCGACC
TTGATCTCGTATTGCTGATGTCTGTCAATCCCGGTTTTGGCGGTCAGTCGTTCATTCCCTCTTCTATTGATAAAATAGCT
GCTCTTGACAGAATGAGATGCGATCGCAACCCGGAAATGATTATTGCTGTTGATGGAGGAATAACTGAGGATAATGCGGG
AGTGGTGGTTGATGCCGGAGCTGATGCGCTGATTGCCGGCACTGCGTTTTTCAAGGCTGCTGATCCTGCTGAAGCTGCAA
GAAAACTCAAGTCTCAGTCCAGATAA

Upstream 100 bases:

>100_bases
TTCGACCCTCTTGATTTCACTTTCCATTTTGGAATAGGCGAGACATTTTAATATTTATCATTCAACATATCTTTTATCAA
CCTTCAAGTCTGCCTGTACA

Downstream 100 bases:

>100_bases
CCCGCTTAAGGTCTTCGCTCACATGCAGCCCTTCACCGATAAGTACAGCATCAAACGATGCATTGTCGAGAAGAGCTGCG
TCGGCGGCAGTTTTGACGCC

Product: ribulose-5-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MPGKTTLLAPSILSADFTALASSIAVAENAGADWIHCDIMDGVFVPNITFGPFIVQAISRCTTMTIDTHLMIIDPDRFIA
DFIKAGSNQVTVHQEACPHLHRTIQLIKSLGAKAGVSINPGTTLATLESILPDLDLVLLMSVNPGFGGQSFIPSSIDKIA
ALDRMRCDRNPEMIIAVDGGITEDNAGVVVDAGADALIAGTAFFKAADPAEAARKLKSQSR

Sequences:

>Translated_221_residues
MPGKTTLLAPSILSADFTALASSIAVAENAGADWIHCDIMDGVFVPNITFGPFIVQAISRCTTMTIDTHLMIIDPDRFIA
DFIKAGSNQVTVHQEACPHLHRTIQLIKSLGAKAGVSINPGTTLATLESILPDLDLVLLMSVNPGFGGQSFIPSSIDKIA
ALDRMRCDRNPEMIIAVDGGITEDNAGVVVDAGADALIAGTAFFKAADPAEAARKLKSQSR
>Mature_220_residues
PGKTTLLAPSILSADFTALASSIAVAENAGADWIHCDIMDGVFVPNITFGPFIVQAISRCTTMTIDTHLMIIDPDRFIAD
FIKAGSNQVTVHQEACPHLHRTIQLIKSLGAKAGVSINPGTTLATLESILPDLDLVLLMSVNPGFGGQSFIPSSIDKIAA
LDRMRCDRNPEMIIAVDGGITEDNAGVVVDAGADALIAGTAFFKAADPAEAARKLKSQSR

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=213, Percent_Identity=34.2723004694836, Blast_Score=139, Evalue=2e-33,
Organism=Homo sapiens, GI219879828, Length=213, Percent_Identity=32.8638497652582, Blast_Score=130, Evalue=8e-31,
Organism=Homo sapiens, GI24307923, Length=159, Percent_Identity=30.188679245283, Blast_Score=85, Evalue=4e-17,
Organism=Escherichia coli, GI1789788, Length=217, Percent_Identity=44.7004608294931, Blast_Score=192, Evalue=1e-50,
Organism=Escherichia coli, GI1790523, Length=215, Percent_Identity=34.8837209302326, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1790754, Length=202, Percent_Identity=32.1782178217822, Blast_Score=97, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17552948, Length=217, Percent_Identity=37.7880184331797, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6322341, Length=226, Percent_Identity=38.9380530973451, Blast_Score=165, Evalue=4e-42,
Organism=Drosophila melanogaster, GI24586301, Length=211, Percent_Identity=36.4928909952607, Blast_Score=147, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23272; Mature: 23141

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGKTTLLAPSILSADFTALASSIAVAENAGADWIHCDIMDGVFVPNITFGPFIVQAISR
CCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEECCCCCHHHHHHHHHHH
CTTMTIDTHLMIIDPDRFIADFIKAGSNQVTVHQEACPHLHRTIQLIKSLGAKAGVSINP
HEEEEEEEEEEEECCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCEECC
GTTLATLESILPDLDLVLLMSVNPGFGGQSFIPSSIDKIAALDRMRCDRNPEMIIAVDGG
CCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCC
ITEDNAGVVVDAGADALIAGTAFFKAADPAEAARKLKSQSR
CCCCCCCEEEECCCCEEEEHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
PGKTTLLAPSILSADFTALASSIAVAENAGADWIHCDIMDGVFVPNITFGPFIVQAISR
CCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEECCCCCHHHHHHHHHHH
CTTMTIDTHLMIIDPDRFIADFIKAGSNQVTVHQEACPHLHRTIQLIKSLGAKAGVSINP
HEEEEEEEEEEEECCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCEECC
GTTLATLESILPDLDLVLLMSVNPGFGGQSFIPSSIDKIAALDRMRCDRNPEMIIAVDGG
CCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCC
ITEDNAGVVVDAGADALIAGTAFFKAADPAEAARKLKSQSR
CCCCCCCEEEECCCCEEEEHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]