| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356366
Identifier: 119356366
GI number: 119356366
Start: 582406
End: 582837
Strand: Direct
Name: 119356366
Synonym: Cpha266_0529
Alternate gene names: NA
Gene position: 582406-582837 (Clockwise)
Preceding gene: 119356365
Following gene: 119356367
Centisome position: 18.58
GC content: 46.99
Gene sequence:
>432_bases ATGAAGTTACTCCGGCGTCATTTTGAAATCATTCAGGAGCAGGCATTCCGCGAACAGCCTTATGAGTGTTGCGGACTGCT TGCCGGTGTCAGTCATGTTGATCACAGGGGGAATATTGAAAATGTCGTATATGAAATAGCCCCCTGTCGCAATTGCCTGT ATTATGGAAAGGAACACGGTTTTGAAATCGGACGTGGTGAGTTTCACGATATTGAGCAGGAGGCCCGTGCACTCGGTTAT GAGATTGTTGGTTCCTATCATTCGCATATCAATTCACCGGCGGTTCCTTCATGCAATGATATCGATTTTTCCAGTCCGGG TCATTCCATGCTGATCATTTCGTTGATAGACGGGGTTCCAAAGGAGGTGACAGCATGGTTGAGAAGAGATTCCGGAGGTT TTCATCAGGAACCGATACGCATTACCCCTTGA
Upstream 100 bases:
>100_bases CTTGCATACAGGGCTGTTGATCATATCAGTTTTGAAGGGGCTTGCTTTCGTCGGGATATAGGGGCTAAGGCACTTTAAAT TATTCAGTTTAAAACATTCC
Downstream 100 bases:
>100_bases CTTCGCACCGGATGTGAACTGAAACTCTGCAAATATTTTGTACATTACGTTCGATTCAGACTTACAAAGTTTAAACCCCT GGAAAACGTGCCAAAGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKLLRRHFEIIQEQAFREQPYECCGLLAGVSHVDHRGNIENVVYEIAPCRNCLYYGKEHGFEIGRGEFHDIEQEARALGY EIVGSYHSHINSPAVPSCNDIDFSSPGHSMLIISLIDGVPKEVTAWLRRDSGGFHQEPIRITP
Sequences:
>Translated_143_residues MKLLRRHFEIIQEQAFREQPYECCGLLAGVSHVDHRGNIENVVYEIAPCRNCLYYGKEHGFEIGRGEFHDIEQEARALGY EIVGSYHSHINSPAVPSCNDIDFSSPGHSMLIISLIDGVPKEVTAWLRRDSGGFHQEPIRITP >Mature_143_residues MKLLRRHFEIIQEQAFREQPYECCGLLAGVSHVDHRGNIENVVYEIAPCRNCLYYGKEHGFEIGRGEFHDIEQEARALGY EIVGSYHSHINSPAVPSCNDIDFSSPGHSMLIISLIDGVPKEVTAWLRRDSGGFHQEPIRITP
Specific function: Unknown
COG id: COG1310
COG function: function code R; Predicted metal-dependent protease of the PAD1/JAB1 superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16220; Mature: 16220
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLRRHFEIIQEQAFREQPYECCGLLAGVSHVDHRGNIENVVYEIAPCRNCLYYGKEHG CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC FEIGRGEFHDIEQEARALGYEIVGSYHSHINSPAVPSCNDIDFSSPGHSMLIISLIDGVP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHCCCC KEVTAWLRRDSGGFHQEPIRITP HHHHHHHHHCCCCCCCCCEEECC >Mature Secondary Structure MKLLRRHFEIIQEQAFREQPYECCGLLAGVSHVDHRGNIENVVYEIAPCRNCLYYGKEHG CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC FEIGRGEFHDIEQEARALGYEIVGSYHSHINSPAVPSCNDIDFSSPGHSMLIISLIDGVP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHCCCC KEVTAWLRRDSGGFHQEPIRITP HHHHHHHHHCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA