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The map label for this gene is ycaC [C]

Identifier: 119356362

GI number: 119356362

Start: 578698

End: 579240

Strand: Direct

Name: ycaC [C]

Synonym: Cpha266_0525

Alternate gene names: 119356362

Gene position: 578698-579240 (Clockwise)

Preceding gene: 119356360

Following gene: 119356365

Centisome position: 18.47

GC content: 48.25

Gene sequence:

>543_bases
ATGATCAGTCCTCAGGAAACGCTGTTACTTGTTATCGATGTTCAGGGAAAACTTGCATCGAGTGTTTTTCATGCTGAACG
TGTCGAGAAAAATATTGATAAACTGATTCGTGCCTGCCGGATTCTTGACGTGCCTGTGCTTTACACCGAGCAGTATCCCA
AAGGGCTTGGATCAACAGTCGAGCCTTTGCGGCGATTGCTTTCCGGTCAGGTGCCGGTTGAAAAGCTGTCGTTCAGTTGT
TGCGGAAGCGAAGAGTTTATGAGGCAATTACGTGCTTTCAAGCGGAACGATATTCTTGTTACCGGCATGGAGACGCATGT
TTGCGTGTATCAGACTTCTTTAGAGCTGCTTGATTTCGGGTATTCCGTGCATCTGGTTACTGACGCCGTTTCGTCGAGGA
GCGAAGAGAACCGACAGCTCGGGATTCGCTGTATTGAGAGAGCGGGGGCAACTCCTACAAGCACTGAAATGGCGGTATTT
GAGCTGCTTCGCATTGCTGAGGGCGAGCAATTCAAGGAGATTTCGAAAATCATCAAGGAATAA

Upstream 100 bases:

>100_bases
TATTTTTGAAGTTGTAAGCGTGTGGCTTATTCGGTTTAAAGGGGTGAGTTTTCAAGGAAACTGTTTTTCAAGTTAAATAT
TTTTCATCGATATCACCATT

Downstream 100 bases:

>100_bases
GAGACGATTTGTTATCGGTTGATAACGGCGTTCAGCATGGTTTTGAGCAGCTTTTCGCCTTCAGTGAATTCCGGCCGGAT
TTTGAGATAGCAGCATGAGA

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Superfamily Hydrolase; Isochorismatase Hydrolase Family Protein; Nicotinamidase-Like Amidase; Hydrolase; Amidase; Amidohydrolase; Isochorismatase Family Hydrolase; Isochorismatase Domain-Containing; Hydrolase Isochorismatase Family; Hydrolase Isochorismatase; Amidase Related Nicotinamidase; YcaC Like Amidohydrolase; Isochorismatase Family; Isochorismatase; Nicotinamidase; YcaC-Related Amidohydrolase; Isochorismatase Domain-Containing A; Isochorismatase Hydrolase Family; Nicotinamidase-Related Amidase; Hydrolase Isochorismatase Family Protein

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MISPQETLLLVIDVQGKLASSVFHAERVEKNIDKLIRACRILDVPVLYTEQYPKGLGSTVEPLRRLLSGQVPVEKLSFSC
CGSEEFMRQLRAFKRNDILVTGMETHVCVYQTSLELLDFGYSVHLVTDAVSSRSEENRQLGIRCIERAGATPTSTEMAVF
ELLRIAEGEQFKEISKIIKE

Sequences:

>Translated_180_residues
MISPQETLLLVIDVQGKLASSVFHAERVEKNIDKLIRACRILDVPVLYTEQYPKGLGSTVEPLRRLLSGQVPVEKLSFSC
CGSEEFMRQLRAFKRNDILVTGMETHVCVYQTSLELLDFGYSVHLVTDAVSSRSEENRQLGIRCIERAGATPTSTEMAVF
ELLRIAEGEQFKEISKIIKE
>Mature_180_residues
MISPQETLLLVIDVQGKLASSVFHAERVEKNIDKLIRACRILDVPVLYTEQYPKGLGSTVEPLRRLLSGQVPVEKLSFSC
CGSEEFMRQLRAFKRNDILVTGMETHVCVYQTSLELLDFGYSVHLVTDAVSSRSEENRQLGIRCIERAGATPTSTEMAVF
ELLRIAEGEQFKEISKIIKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI209969695, Length=179, Percent_Identity=34.6368715083799, Blast_Score=105, Evalue=2e-23,
Organism=Homo sapiens, GI103471987, Length=181, Percent_Identity=33.7016574585635, Blast_Score=103, Evalue=8e-23,
Organism=Homo sapiens, GI13376007, Length=193, Percent_Identity=32.1243523316062, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17540156, Length=180, Percent_Identity=38.3333333333333, Blast_Score=130, Evalue=4e-31,
Organism=Drosophila melanogaster, GI19922924, Length=185, Percent_Identity=33.5135135135135, Blast_Score=111, Evalue=3e-25,
Organism=Drosophila melanogaster, GI21357489, Length=179, Percent_Identity=31.8435754189944, Blast_Score=93, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20279; Mature: 20279

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISPQETLLLVIDVQGKLASSVFHAERVEKNIDKLIRACRILDVPVLYTEQYPKGLGSTV
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHH
EPLRRLLSGQVPVEKLSFSCCGSEEFMRQLRAFKRNDILVTGMETHVCVYQTSLELLDFG
HHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCEEEEHHHHHHHHHCC
YSVHLVTDAVSSRSEENRQLGIRCIERAGATPTSTEMAVFELLRIAEGEQFKEISKIIKE
CCEEHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MISPQETLLLVIDVQGKLASSVFHAERVEKNIDKLIRACRILDVPVLYTEQYPKGLGSTV
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHH
EPLRRLLSGQVPVEKLSFSCCGSEEFMRQLRAFKRNDILVTGMETHVCVYQTSLELLDFG
HHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCEEEEHHHHHHHHHCC
YSVHLVTDAVSSRSEENRQLGIRCIERAGATPTSTEMAVFELLRIAEGEQFKEISKIIKE
CCEEHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA