| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356360
Identifier: 119356360
GI number: 119356360
Start: 577162
End: 577833
Strand: Direct
Name: 119356360
Synonym: Cpha266_0523
Alternate gene names: NA
Gene position: 577162-577833 (Clockwise)
Preceding gene: 119356359
Following gene: 119356362
Centisome position: 18.42
GC content: 50.89
Gene sequence:
>672_bases ATGGTTTGTTTGTGGATTTTGACAGAACAACTTTTGAAAAATGCTGTTTTGCTTGTTTTTTTTCTGTTGGTTGCGTTGGG TTGCGCTGACGACAGGAAAAAAAACGGAGCCGAGGTGAGCATAGGTGATCAAGTCTGGATGAACCGGAATCTTGAAGTTG ATCGATATCGTACCGGCGATCCTGTGCGGGAGGCGCAGACGGTTGCAGAGTGGCAGGATGCCGCTGTACACGAGGAGGGC GCCTGGTGCTGGTATGATGGTGAGCGCGACAACGAAAGGGTTTACGGTAAACTTTACAACTGGTTTGCTGTCAACGATTC ACGTGGGCTTGCTCCAGCGGGGTGGCATATTCCTTCTGATGATGAGTGGAAACGGCTTGCCGTTTTTCTTGGTGGCGAAG GGATTGCTGCCGGAAAACTGAAAACCCTGAATTTCCGGGTATTGCCCGGTGTTGATGTTGATAACAGTACCGGATTCAGC GCCGTGCCTGCGGGAAGCCGCAACTGTCTCGATGGTTTTTTTGGTAAGGAGATGGCGGCTTTTTTCTGGTCTTCAACTCA GTCGGGTGATTTCGAGGCATGGAACAGGGAGCTCGGGAGCGCCAGCAATGCCATACAGCGGGTGAGTGTTAATAAAAGCC TCGGCTTATCGGTGCGATGCATCAAAGATTGA
Upstream 100 bases:
>100_bases TCTCTTCTCTGGAGAGCGATGCGTGATACTGAGCGTTACCGGGGTTCTGTGTGCTTTTATTTTGGCGTATCGGTGATAGT GGAAAAAAAGGAGAGAGGAG
Downstream 100 bases:
>100_bases TGTATCAGGGACTCATCTTTTCCTCTGGTTTTGTTTTGCCAAAAGCGTGAGCGTTGTTGGGTATGATAAGTTGAAAATTC GGGAGAGAAAAAACGACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MVCLWILTEQLLKNAVLLVFFLLVALGCADDRKKNGAEVSIGDQVWMNRNLEVDRYRTGDPVREAQTVAEWQDAAVHEEG AWCWYDGERDNERVYGKLYNWFAVNDSRGLAPAGWHIPSDDEWKRLAVFLGGEGIAAGKLKTLNFRVLPGVDVDNSTGFS AVPAGSRNCLDGFFGKEMAAFFWSSTQSGDFEAWNRELGSASNAIQRVSVNKSLGLSVRCIKD
Sequences:
>Translated_223_residues MVCLWILTEQLLKNAVLLVFFLLVALGCADDRKKNGAEVSIGDQVWMNRNLEVDRYRTGDPVREAQTVAEWQDAAVHEEG AWCWYDGERDNERVYGKLYNWFAVNDSRGLAPAGWHIPSDDEWKRLAVFLGGEGIAAGKLKTLNFRVLPGVDVDNSTGFS AVPAGSRNCLDGFFGKEMAAFFWSSTQSGDFEAWNRELGSASNAIQRVSVNKSLGLSVRCIKD >Mature_223_residues MVCLWILTEQLLKNAVLLVFFLLVALGCADDRKKNGAEVSIGDQVWMNRNLEVDRYRTGDPVREAQTVAEWQDAAVHEEG AWCWYDGERDNERVYGKLYNWFAVNDSRGLAPAGWHIPSDDEWKRLAVFLGGEGIAAGKLKTLNFRVLPGVDVDNSTGFS AVPAGSRNCLDGFFGKEMAAFFWSSTQSGDFEAWNRELGSASNAIQRVSVNKSLGLSVRCIKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24816; Mature: 24816
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCLWILTEQLLKNAVLLVFFLLVALGCADDRKKNGAEVSIGDQVWMNRNLEVDRYRTGD CEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHEECCCCCEECCCCCC PVREAQTVAEWQDAAVHEEGAWCWYDGERDNERVYGKLYNWFAVNDSRGLAPAGWHIPSD HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCC DEWKRLAVFLGGEGIAAGKLKTLNFRVLPGVDVDNSTGFSAVPAGSRNCLDGFFGKEMAA CCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH FFWSSTQSGDFEAWNRELGSASNAIQRVSVNKSLGLSVRCIKD HHHCCCCCCCHHHHHHHHCCHHHHHHEEECCCCCCCEEEEECC >Mature Secondary Structure MVCLWILTEQLLKNAVLLVFFLLVALGCADDRKKNGAEVSIGDQVWMNRNLEVDRYRTGD CEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHEECCCCCEECCCCCC PVREAQTVAEWQDAAVHEEGAWCWYDGERDNERVYGKLYNWFAVNDSRGLAPAGWHIPSD HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCC DEWKRLAVFLGGEGIAAGKLKTLNFRVLPGVDVDNSTGFSAVPAGSRNCLDGFFGKEMAA CCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH FFWSSTQSGDFEAWNRELGSASNAIQRVSVNKSLGLSVRCIKD HHHCCCCCCCHHHHHHHHCCHHHHHHEEECCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA