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The map label for this gene is elbB [H]

Identifier: 119356357

GI number: 119356357

Start: 573778

End: 574434

Strand: Reverse

Name: elbB [H]

Synonym: Cpha266_0520

Alternate gene names: 119356357

Gene position: 574434-573778 (Counterclockwise)

Preceding gene: 119356361

Following gene: 119356355

Centisome position: 18.33

GC content: 49.77

Gene sequence:

>657_bases
ATGAAAAAAACAGGTGTTCTTCTATCAGGATGCGGTTTTCTTGACGGATCGGAGATCCAGGAAGCCGTTCTTACCTTGCT
TGCTCTCGATAAAGCAGGCGTTGAAGCAATTTGCCTCGCGCCAGACATCCCTCAGCACCATGTCATCAACCACTGCACCG
GGCAGGTGATGCCAAGCGAAAATCGCAATGTTCTTGTTGAATCCGCACGCATTTCACGAGGCTCAATCGTAAACCTCGAC
CGTATCGACACCCTTGATCTTGATGCTCTCATCCTGCCGGGAGGCTATGGCGTTGCAAAAAATCTCAGCAACTATGCAAG
CAAGGGCACATCATGCGAAGTGCATCCCGATGTTCGATCGGCAATTCAATCCTTTTACCATGCAGGCAAACCACTGGGCT
TTATCTGTATTGCTCCTGTTATCGCTGCCAGAGTTCTCGGGAACGAGTCTATCGAACTGACCATCGGGAGTGACACGGAG
AGTGCCGACCATATAGAGCTCATGGGCGCAAAGCATGTTGACTGCCCGGTTTACAACATACACATCAGCAAACAGGGTAA
AGTGGTCAGCACACCAGCCTATATGCTCGGCCAATCAATTGGAGAGGTTGCAATGGGTATTGAAAAACTCGTCAATGCCG
TGGTAGCACTACTTTGA

Upstream 100 bases:

>100_bases
ATGATAAAATCACCTGCACGCTCCTTTTATTACCCTGTAACCGTTACCTTACAGGAAAGATGCTCTCTAACAATAATCCA
CGCTATCCTACCGTACGGCC

Downstream 100 bases:

>100_bases
CCTGCGGTTTTTCTCAAATGGAACGCCGACCTGTCGAGGCGCAGCCGATTTGCCGGCAAACCCCGCAAGCACCAGAAGAG
TGACGATATAGGGCAACGAC

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKKTGVLLSGCGFLDGSEIQEAVLTLLALDKAGVEAICLAPDIPQHHVINHCTGQVMPSENRNVLVESARISRGSIVNLD
RIDTLDLDALILPGGYGVAKNLSNYASKGTSCEVHPDVRSAIQSFYHAGKPLGFICIAPVIAARVLGNESIELTIGSDTE
SADHIELMGAKHVDCPVYNIHISKQGKVVSTPAYMLGQSIGEVAMGIEKLVNAVVALL

Sequences:

>Translated_218_residues
MKKTGVLLSGCGFLDGSEIQEAVLTLLALDKAGVEAICLAPDIPQHHVINHCTGQVMPSENRNVLVESARISRGSIVNLD
RIDTLDLDALILPGGYGVAKNLSNYASKGTSCEVHPDVRSAIQSFYHAGKPLGFICIAPVIAARVLGNESIELTIGSDTE
SADHIELMGAKHVDCPVYNIHISKQGKVVSTPAYMLGQSIGEVAMGIEKLVNAVVALL
>Mature_218_residues
MKKTGVLLSGCGFLDGSEIQEAVLTLLALDKAGVEAICLAPDIPQHHVINHCTGQVMPSENRNVLVESARISRGSIVNLD
RIDTLDLDALILPGGYGVAKNLSNYASKGTSCEVHPDVRSAIQSFYHAGKPLGFICIAPVIAARVLGNESIELTIGSDTE
SADHIELMGAKHVDCPVYNIHISKQGKVVSTPAYMLGQSIGEVAMGIEKLVNAVVALL

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=224, Percent_Identity=42.8571428571429, Blast_Score=187, Evalue=9e-48,
Organism=Homo sapiens, GI296531408, Length=224, Percent_Identity=37.5, Blast_Score=142, Evalue=2e-34,
Organism=Escherichia coli, GI87082228, Length=217, Percent_Identity=54.3778801843318, Blast_Score=242, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 23038; Mature: 23038

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTGVLLSGCGFLDGSEIQEAVLTLLALDKAGVEAICLAPDIPQHHVINHCTGQVMPSE
CCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCCCCC
NRNVLVESARISRGSIVNLDRIDTLDLDALILPGGYGVAKNLSNYASKGTSCEVHPDVRS
CCEEEEEECCCCCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEECHHHHH
AIQSFYHAGKPLGFICIAPVIAARVLGNESIELTIGSDTESADHIELMGAKHVDCPVYNI
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEE
HISKQGKVVSTPAYMLGQSIGEVAMGIEKLVNAVVALL
EECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKKTGVLLSGCGFLDGSEIQEAVLTLLALDKAGVEAICLAPDIPQHHVINHCTGQVMPSE
CCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCCCCC
NRNVLVESARISRGSIVNLDRIDTLDLDALILPGGYGVAKNLSNYASKGTSCEVHPDVRS
CCEEEEEECCCCCCCEEECCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEECHHHHH
AIQSFYHAGKPLGFICIAPVIAARVLGNESIELTIGSDTESADHIELMGAKHVDCPVYNI
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEE
HISKQGKVVSTPAYMLGQSIGEVAMGIEKLVNAVVALL
EECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]