| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is hisH [H]
Identifier: 119356328
GI number: 119356328
Start: 538882
End: 539487
Strand: Direct
Name: hisH [H]
Synonym: Cpha266_0491
Alternate gene names: 119356328
Gene position: 538882-539487 (Clockwise)
Preceding gene: 119356320
Following gene: 119356329
Centisome position: 17.2
GC content: 44.06
Gene sequence:
>606_bases ATGGTTTTTATTGCTGACTATGGGGCAGGAAATCTCCGTTCTGTTCAGAAAGCTTTTGATTATCTCGGAGTAAACTCTGT GGTCAGCAGTGATCCCGGGAAACTTGTCGGGTGTAAAAAAGTACTTTTGCCTGGCGTTGGAGCGTTTGGCCAGGCAATTG ATTCATTGAATAGGTCGGGATTTACCGATGCCGTTCGTGAACATGTTGACAAAGGCGGTCACTTGCTCGGTATTTGCCTT GGCATGCAGCTTTTGCTTAGCGAAAGCGAAGAGATGGGTTCTCATTCCGGCATGAATCTTGTACCGGGAAAAGTGAGGCA TTTCAGAAGCGCAACCGATAAAATTCCACAGATAGGATGGAATTCCATTCAGATGCAGAAAGAAAGTCTTCTGTTCAGAG GTATGCCGGATGGTTCTTTTTTTTATTTTGTACACTCCTATTATTGTGAACCTGAAGATAATGATGCCGTGGCGGCGGTA ACCTGGTTTGCGGGAAATAATTTTTGTTCCGCCATTGAAAAAAATGGTATTTTTGCAGTCCAGTTTCATCCTGAAAAAAG TTCCGAGGCCGGTTTACAGGTGCTGAAGAATTTTGCAGGGTGTTAA
Upstream 100 bases:
>100_bases TATAATAAGCATTAATCATCCAATTTAAAACCGGATTTTTTTTATACAGGTATCGCGGGCACCCGGTTTTGGGCGCCCGT AACCGTTAACTCTTTTTTTT
Downstream 100 bases:
>100_bases GAATCGTTTGTTTTGTTTTTTTATGCTGATAATTCCTGCTATAGACATTAAGGACGGAAGATGTGTGCGGTTGACTCGTG GTGATTTCAACCAGCAGAAA
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MVFIADYGAGNLRSVQKAFDYLGVNSVVSSDPGKLVGCKKVLLPGVGAFGQAIDSLNRSGFTDAVREHVDKGGHLLGICL GMQLLLSESEEMGSHSGMNLVPGKVRHFRSATDKIPQIGWNSIQMQKESLLFRGMPDGSFFYFVHSYYCEPEDNDAVAAV TWFAGNNFCSAIEKNGIFAVQFHPEKSSEAGLQVLKNFAGC
Sequences:
>Translated_201_residues MVFIADYGAGNLRSVQKAFDYLGVNSVVSSDPGKLVGCKKVLLPGVGAFGQAIDSLNRSGFTDAVREHVDKGGHLLGICL GMQLLLSESEEMGSHSGMNLVPGKVRHFRSATDKIPQIGWNSIQMQKESLLFRGMPDGSFFYFVHSYYCEPEDNDAVAAV TWFAGNNFCSAIEKNGIFAVQFHPEKSSEAGLQVLKNFAGC >Mature_201_residues MVFIADYGAGNLRSVQKAFDYLGVNSVVSSDPGKLVGCKKVLLPGVGAFGQAIDSLNRSGFTDAVREHVDKGGHLLGICL GMQLLLSESEEMGSHSGMNLVPGKVRHFRSATDKIPQIGWNSIQMQKESLLFRGMPDGSFFYFVHSYYCEPEDNDAVAAV TWFAGNNFCSAIEKNGIFAVQFHPEKSSEAGLQVLKNFAGC
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=197, Percent_Identity=37.0558375634518, Blast_Score=125, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6319725, Length=208, Percent_Identity=36.0576923076923, Blast_Score=134, Evalue=9e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 21791; Mature: 21791
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFIADYGAGNLRSVQKAFDYLGVNSVVSSDPGKLVGCKKVLLPGVGAFGQAIDSLNRSG CEEEEECCCCCHHHHHHHHHHHCCHHHHCCCCCCEECHHHHHHCCCCHHHHHHHHHCCCC FTDAVREHVDKGGHLLGICLGMQLLLSESEEMGSHSGMNLVPGKVRHFRSATDKIPQIGW CHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC NSIQMQKESLLFRGMPDGSFFYFVHSYYCEPEDNDAVAAVTWFAGNNFCSAIEKNGIFAV CHHHHHHHHHHEECCCCCCEEEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHCCCEEEE QFHPEKSSEAGLQVLKNFAGC EECCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MVFIADYGAGNLRSVQKAFDYLGVNSVVSSDPGKLVGCKKVLLPGVGAFGQAIDSLNRSG CEEEEECCCCCHHHHHHHHHHHCCHHHHCCCCCCEECHHHHHHCCCCHHHHHHHHHCCCC FTDAVREHVDKGGHLLGICLGMQLLLSESEEMGSHSGMNLVPGKVRHFRSATDKIPQIGW CHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC NSIQMQKESLLFRGMPDGSFFYFVHSYYCEPEDNDAVAAVTWFAGNNFCSAIEKNGIFAV CHHHHHHHHHHEECCCCCCEEEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHCCCEEEE QFHPEKSSEAGLQVLKNFAGC EECCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA