Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119356323

Identifier: 119356323

GI number: 119356323

Start: 533801

End: 534814

Strand: Reverse

Name: 119356323

Synonym: Cpha266_0486

Alternate gene names: NA

Gene position: 534814-533801 (Counterclockwise)

Preceding gene: 119356324

Following gene: 119356322

Centisome position: 17.07

GC content: 51.97

Gene sequence:

>1014_bases
ATGCACATGTCAGACGCTCTGCTCTCCCCGATCGTCGGAGGAGCATTCTGGATAATCAGCGGTACGCTTATCGGCTATTC
GGCAAAAAAAATTATCGAAGAAAACGATCATGCAAAAACGCCCCTGATGGGTGTGATGGGAGCCTTTATTTTTGCCGCAC
AGATGATCAATTTTTCAATTCCCGGAACCGGCTCAAGCGGACATCTTGGCGGCGGTCTTTTGCTTGCAGCGCTACTCGGG
CCATACCGAGCATTTATCACGTTATCCTCCGTTCTTATTATCCAGTCTCTTTTTTTTGGCGACGGAGGACTGCTTGCGCT
TGGATGCAACATGTTCAATCTGGCGTACTTTCCGGCCTTTCTCGCTTATCCGCTCATCTTCCGAAAAATCATCGGCAATA
ATCCCTCGCAGCAACGACTTGCCGCAGGAAGTATCTCTGCGGCCATCGCTGGATTGCTTATGGGGGCATTTTCCGTTGTC
ATCGAAACCGTGCTCTCGGGTATTTCAGAACTTCCGTTTGGCTCCTTTATGCTCTTTATGATGCCGATCCACCTCGCCAT
CGGTATTGTTGAAGGTCTGGTAACATGGGCGGTGCTTTCCTTTGTAGCAAAAACAGATCCCGCTCTGCTCCCTTCAAATC
AAAACGCTGCCAGACCCAGGGCTGCCATCCTTGGCGTGTTAACCATTGCCGCACTGCTGACCGGAGGAGTCCTCTCCTGG
TTTGCATCATCCTCTCCGGATGGGCTGGAATGGTCGATATCCCGGACAAGCGGCTCAGAAGAGTTGCTGAACAGAGGCGA
ACCAATTCATGAACTGCTTGGATCCATACAGGAGAAAACCGCTTTTCTGCCCGACTACTCGTTCAAAACCGCCGATGCGA
CCTCTCCCTCTGGCGATTCGCCGGTAAACCCGGCAGCCACCGTTTCAGGCCTTGCAGGGAGCTTCTCCGTTCTCATTATG
GCAGGGCTGGCTGGCCTGATTCTTGCAAAAAAGCGAACAAGGGGGAACCATTGA

Upstream 100 bases:

>100_bases
AACATGAGTGTCAGGCTTTTTGCTTTTTGATATCACAATCGTTACTATTTTGACACAGGAACGCGCTCAATAAGCCCGAA
TTAAAAAGGAGACCCATCTC

Downstream 100 bases:

>100_bases
TGACAAACCGGGTCACGCGATTTTTTCCATGCAATGCCAATGAAAAACAGAACCCGGAAAAAGGCGCCCTGCTCCTGGGA
AGCGACCGATCGGCGCTTCT

Product: cobalamin (vitamin B12) biosynthesis CbiM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MHMSDALLSPIVGGAFWIISGTLIGYSAKKIIEENDHAKTPLMGVMGAFIFAAQMINFSIPGTGSSGHLGGGLLLAALLG
PYRAFITLSSVLIIQSLFFGDGGLLALGCNMFNLAYFPAFLAYPLIFRKIIGNNPSQQRLAAGSISAAIAGLLMGAFSVV
IETVLSGISELPFGSFMLFMMPIHLAIGIVEGLVTWAVLSFVAKTDPALLPSNQNAARPRAAILGVLTIAALLTGGVLSW
FASSSPDGLEWSISRTSGSEELLNRGEPIHELLGSIQEKTAFLPDYSFKTADATSPSGDSPVNPAATVSGLAGSFSVLIM
AGLAGLILAKKRTRGNH

Sequences:

>Translated_337_residues
MHMSDALLSPIVGGAFWIISGTLIGYSAKKIIEENDHAKTPLMGVMGAFIFAAQMINFSIPGTGSSGHLGGGLLLAALLG
PYRAFITLSSVLIIQSLFFGDGGLLALGCNMFNLAYFPAFLAYPLIFRKIIGNNPSQQRLAAGSISAAIAGLLMGAFSVV
IETVLSGISELPFGSFMLFMMPIHLAIGIVEGLVTWAVLSFVAKTDPALLPSNQNAARPRAAILGVLTIAALLTGGVLSW
FASSSPDGLEWSISRTSGSEELLNRGEPIHELLGSIQEKTAFLPDYSFKTADATSPSGDSPVNPAATVSGLAGSFSVLIM
AGLAGLILAKKRTRGNH
>Mature_337_residues
MHMSDALLSPIVGGAFWIISGTLIGYSAKKIIEENDHAKTPLMGVMGAFIFAAQMINFSIPGTGSSGHLGGGLLLAALLG
PYRAFITLSSVLIIQSLFFGDGGLLALGCNMFNLAYFPAFLAYPLIFRKIIGNNPSQQRLAAGSISAAIAGLLMGAFSVV
IETVLSGISELPFGSFMLFMMPIHLAIGIVEGLVTWAVLSFVAKTDPALLPSNQNAARPRAAILGVLTIAALLTGGVLSW
FASSSPDGLEWSISRTSGSEELLNRGEPIHELLGSIQEKTAFLPDYSFKTADATSPSGDSPVNPAATVSGLAGSFSVLIM
AGLAGLILAKKRTRGNH

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 35113; Mature: 35113

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMSDALLSPIVGGAFWIISGTLIGYSAKKIIEENDHAKTPLMGVMGAFIFAAQMINFSI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
PGTGSSGHLGGGLLLAALLGPYRAFITLSSVLIIQSLFFGDGGLLALGCNMFNLAYFPAF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH
LAYPLIFRKIIGNNPSQQRLAAGSISAAIAGLLMGAFSVVIETVLSGISELPFGSFMLFM
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
MPIHLAIGIVEGLVTWAVLSFVAKTDPALLPSNQNAARPRAAILGVLTIAALLTGGVLSW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FASSSPDGLEWSISRTSGSEELLNRGEPIHELLGSIQEKTAFLPDYSFKTADATSPSGDS
HHCCCCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PVNPAATVSGLAGSFSVLIMAGLAGLILAKKRTRGNH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHMSDALLSPIVGGAFWIISGTLIGYSAKKIIEENDHAKTPLMGVMGAFIFAAQMINFSI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
PGTGSSGHLGGGLLLAALLGPYRAFITLSSVLIIQSLFFGDGGLLALGCNMFNLAYFPAF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH
LAYPLIFRKIIGNNPSQQRLAAGSISAAIAGLLMGAFSVVIETVLSGISELPFGSFMLFM
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
MPIHLAIGIVEGLVTWAVLSFVAKTDPALLPSNQNAARPRAAILGVLTIAALLTGGVLSW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FASSSPDGLEWSISRTSGSEELLNRGEPIHELLGSIQEKTAFLPDYSFKTADATSPSGDS
HHCCCCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PVNPAATVSGLAGSFSVLIMAGLAGLILAKKRTRGNH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]